EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000020056 (Gene tree)
Gene ID: 108232886
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 8608 bases
Position: chrLWHD01000018.1:2132200-2140807
Accession: 108232886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000027040	MMR_HSR1	PF01926.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027379	-	4233	XM_017410976	ENSKMAP00000027040	239 (aa)	XP_017266465	UPI0007F8735F

Gene Model

Click here to download ENSKMAG00000020056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000020056	rab12	65	41.026	ENSKMAG00000002545	-	73	41.026
ENSKMAG00000020056	rab12	70	40.120	ENSKMAG00000003494	si:dkey-16l2.16	78	40.606
ENSKMAG00000020056	rab12	77	49.727	ENSKMAG00000018973	-	83	49.462
ENSKMAG00000020056	rab12	70	39.306	ENSKMAG00000002862	zgc:101559	73	39.306
ENSKMAG00000020056	rab12	78	43.850	ENSKMAG00000004439	rab30	84	45.930
ENSKMAG00000020056	rab12	62	36.601	ENSKMAG00000020034	-	52	36.601
ENSKMAG00000020056	rab12	72	37.791	ENSKMAG00000020038	rab5c	76	37.791
ENSKMAG00000020056	rab12	66	40.994	ENSKMAG00000012778	si:dkey-34d22.5	72	40.994
ENSKMAG00000020056	rab12	80	45.026	ENSKMAG00000017357	rab1ab	83	48.521
ENSKMAG00000020056	rab12	69	32.335	ENSKMAG00000020448	rheb	89	32.335
ENSKMAG00000020056	rab12	67	35.976	ENSKMAG00000019647	rab34a	61	35.976
ENSKMAG00000020056	rab12	66	32.704	ENSKMAG00000019397	rhebl1	85	32.704
ENSKMAG00000020056	rab12	85	40.000	ENSKMAG00000009856	zgc:171927	84	43.646
ENSKMAG00000020056	rab12	72	38.372	ENSKMAG00000017417	-	76	38.372
ENSKMAG00000020056	rab12	73	39.655	ENSKMAG00000011301	-	80	39.884
ENSKMAG00000020056	rab12	63	30.464	ENSKMAG00000003938	kras	85	30.864
ENSKMAG00000020056	rab12	72	37.791	ENSKMAG00000005111	rab5aa	79	37.791
ENSKMAG00000020056	rab12	70	43.452	ENSKMAG00000009799	rab2a	79	43.452
ENSKMAG00000020056	rab12	66	35.625	ENSKMAG00000019341	rab34b	63	35.625
ENSKMAG00000020056	rab12	85	37.799	ENSKMAG00000009033	rab11bb	75	43.030
ENSKMAG00000020056	rab12	65	41.667	ENSKMAG00000011278	rab6bb	77	41.290
ENSKMAG00000020056	rab12	84	30.882	ENSKMAG00000019964	rab9b	83	33.929
ENSKMAG00000020056	rab12	85	38.389	ENSKMAG00000015516	rab11al	84	40.984
ENSKMAG00000020056	rab12	85	37.441	ENSKMAG00000012657	-	78	40.462
ENSKMAG00000020056	rab12	87	37.681	ENSKMAG00000006854	rab35b	99	37.681
ENSKMAG00000020056	rab12	82	34.171	ENSKMAG00000020013	-	77	38.994
ENSKMAG00000020056	rab12	77	41.398	ENSKMAG00000007267	rab42a	78	42.442
ENSKMAG00000020056	rab12	71	40.828	ENSKMAG00000020250	rab4a	79	40.828
ENSKMAG00000020056	rab12	72	48.256	ENSKMAG00000001908	rab13	87	49.091
ENSKMAG00000020056	rab12	64	35.849	ENSKMAG00000018270	rab23	74	33.889
ENSKMAG00000020056	rab12	69	33.929	ENSKMAG00000017662	rab9a	83	33.929
ENSKMAG00000020056	rab12	80	45.312	ENSKMAG00000014038	-	89	45.503
ENSKMAG00000020056	rab12	67	33.540	ENSKMAG00000020733	rras	87	33.333
ENSKMAG00000020056	rab12	85	38.756	ENSKMAG00000011905	rab11a	95	38.756
ENSKMAG00000020056	rab12	74	38.095	ENSKMAG00000003105	rab33ba	87	37.019
ENSKMAG00000020056	rab12	69	42.424	ENSKMAG00000006082	-	75	42.424
ENSKMAG00000020056	rab12	68	47.561	ENSKMAG00000007364	rab18b	79	47.561
ENSKMAG00000020056	rab12	72	44.444	ENSKMAG00000020392	rab15	80	44.444
ENSKMAG00000020056	rab12	87	35.849	ENSKMAG00000017487	rab14	80	39.884
ENSKMAG00000020056	rab12	85	38.350	ENSKMAG00000004945	rab25a	95	38.350
ENSKMAG00000020056	rab12	68	35.928	ENSKMAG00000021039	si:dkey-13a21.4	69	35.928
ENSKMAG00000020056	rab12	69	42.169	ENSKMAG00000008625	RAB39B	77	42.169
ENSKMAG00000020056	rab12	69	35.714	ENSKMAG00000003646	-	84	35.714
ENSKMAG00000020056	rab12	67	35.849	ENSKMAG00000014705	rab22a	81	35.849
ENSKMAG00000020056	rab12	87	38.028	ENSKMAG00000015488	rab25b	84	41.341
ENSKMAG00000020056	rab12	79	43.386	ENSKMAG00000001191	RAB15	87	43.386
ENSKMAG00000020056	rab12	83	34.314	ENSKMAG00000017150	-	75	35.119
ENSKMAG00000020056	rab12	65	30.573	ENSKMAG00000017893	mras	80	30.952
ENSKMAG00000020056	rab12	71	47.337	ENSKMAG00000006810	rab1ba	84	47.337
ENSKMAG00000020056	rab12	65	38.994	ENSKMAG00000006812	RAB7A	76	38.994
ENSKMAG00000020056	rab12	65	41.935	ENSKMAG00000013146	-	80	41.935
ENSKMAG00000020056	rab12	73	38.286	ENSKMAG00000015507	rab6ba	84	38.286
ENSKMAG00000020056	rab12	85	37.799	ENSKMAG00000006170	-	75	43.030
ENSKMAG00000020056	rab12	68	34.568	ENSKMAG00000012723	rabl2	70	34.568
ENSKMAG00000020056	rab12	81	36.869	ENSKMAG00000006593	rab33a	76	41.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020056	rab12	93	81.778	ENSG00000206418	RAB12	100	81.148	Homo_sapiens
ENSKMAG00000020056	rab12	91	75.342	ENSAMEG00000007452	RAB12	99	76.087	Ailuropoda_melanoleuca
ENSKMAG00000020056	rab12	100	90.164	ENSACIG00000020616	rab12	100	92.213	Amphilophus_citrinellus
ENSKMAG00000020056	rab12	100	90.535	ENSAOCG00000002130	rab12	100	91.770	Amphiprion_ocellaris
ENSKMAG00000020056	rab12	100	90.535	ENSAPEG00000013255	rab12	100	91.770	Amphiprion_percula
ENSKMAG00000020056	rab12	100	91.736	ENSATEG00000019683	rab12	100	92.975	Anabas_testudineus
ENSKMAG00000020056	rab12	84	86.500	ENSACAG00000003360	RAB12	96	79.352	Anolis_carolinensis
ENSKMAG00000020056	rab12	100	92.181	ENSACLG00000007696	rab12	100	93.416	Astatotilapia_calliptera
ENSKMAG00000020056	rab12	100	86.992	ENSAMXG00000004882	rab12	100	87.398	Astyanax_mexicanus
ENSKMAG00000020056	rab12	93	81.778	ENSBTAG00000010356	RAB12	100	81.148	Bos_taurus
ENSKMAG00000020056	rab12	93	81.416	ENSCJAG00000015468	RAB12	72	80.816	Callithrix_jacchus
ENSKMAG00000020056	rab12	93	81.778	ENSCAFG00020023721	RAB12	84	81.148	Canis_lupus_dingo
ENSKMAG00000020056	rab12	93	81.778	ENSCHIG00000016103	RAB12	100	81.148	Capra_hircus
ENSKMAG00000020056	rab12	87	82.381	ENSCPOG00000022689	RAB12	100	86.190	Cavia_porcellus
ENSKMAG00000020056	rab12	93	81.416	ENSCCAG00000022862	RAB12	100	80.816	Cebus_capucinus
ENSKMAG00000020056	rab12	92	81.696	ENSCATG00000037784	RAB12	98	81.780	Cercocebus_atys
ENSKMAG00000020056	rab12	93	79.913	ENSCSAG00000017569	RAB12	72	79.435	Chlorocebus_sabaeus
ENSKMAG00000020056	rab12	93	80.973	ENSCPBG00000028375	RAB12	100	80.408	Chrysemys_picta_bellii
ENSKMAG00000020056	rab12	91	81.735	ENSCANG00000031453	RAB12	99	84.932	Colobus_angolensis_palliatus
ENSKMAG00000020056	rab12	93	82.589	ENSCGRG00001006958	Rab12	83	81.481	Cricetulus_griseus_chok1gshd
ENSKMAG00000020056	rab12	100	90.123	ENSCSEG00000016933	rab12	100	91.770	Cynoglossus_semilaevis
ENSKMAG00000020056	rab12	100	90.650	ENSCVAG00000003539	rab12	100	91.463	Cyprinodon_variegatus
ENSKMAG00000020056	rab12	100	86.611	ENSDARG00000089428	rab12	100	86.611	Danio_rerio
ENSKMAG00000020056	rab12	85	86.341	ENSDNOG00000046064	RAB12	56	82.231	Dasypus_novemcinctus
ENSKMAG00000020056	rab12	94	81.498	ENSDORG00000008920	Rab12	99	84.956	Dipodomys_ordii
ENSKMAG00000020056	rab12	79	67.725	ENSEBUG00000006581	rab12	91	67.725	Eptatretus_burgeri
ENSKMAG00000020056	rab12	93	82.143	ENSEASG00005002926	RAB12	83	81.481	Equus_asinus_asinus
ENSKMAG00000020056	rab12	93	82.143	ENSECAG00000007384	RAB12	71	81.481	Equus_caballus
ENSKMAG00000020056	rab12	100	87.917	ENSELUG00000007123	rab12	100	87.917	Esox_lucius
ENSKMAG00000020056	rab12	93	81.778	ENSFCAG00000027710	RAB12	72	81.148	Felis_catus
ENSKMAG00000020056	rab12	100	89.388	ENSFHEG00000004319	rab12	100	91.837	Fundulus_heteroclitus
ENSKMAG00000020056	rab12	86	90.291	ENSGMOG00000012335	rab12	87	91.748	Gadus_morhua
ENSKMAG00000020056	rab12	87	84.689	ENSGALG00000033608	RAB12	96	81.328	Gallus_gallus
ENSKMAG00000020056	rab12	89	90.698	ENSGACG00000016639	rab12	99	92.093	Gasterosteus_aculeatus
ENSKMAG00000020056	rab12	93	80.973	ENSGAGG00000007278	RAB12	100	80.408	Gopherus_agassizii
ENSKMAG00000020056	rab12	100	92.181	ENSHBUG00000008497	rab12	100	93.416	Haplochromis_burtoni
ENSKMAG00000020056	rab12	97	78.205	ENSHGLG00000006189	RAB12	91	81.974	Heterocephalus_glaber_female
ENSKMAG00000020056	rab12	100	88.066	ENSHCOG00000012376	rab12	100	88.066	Hippocampus_comes
ENSKMAG00000020056	rab12	93	91.480	ENSIPUG00000017401	rab12	100	86.475	Ictalurus_punctatus
ENSKMAG00000020056	rab12	91	81.735	ENSSTOG00000025122	RAB12	96	84.932	Ictidomys_tridecemlineatus
ENSKMAG00000020056	rab12	93	81.333	ENSJJAG00000019064	Rab12	99	84.444	Jaculus_jaculus
ENSKMAG00000020056	rab12	100	90.496	ENSLBEG00000013756	rab12	100	91.736	Labrus_bergylta
ENSKMAG00000020056	rab12	92	85.650	ENSLACG00000010461	RAB12	100	79.920	Latimeria_chalumnae
ENSKMAG00000020056	rab12	93	85.153	ENSLOCG00000002680	rab12	100	84.677	Lepisosteus_oculatus
ENSKMAG00000020056	rab12	93	80.617	ENSMFAG00000043551	RAB12	100	80.081	Macaca_fascicularis
ENSKMAG00000020056	rab12	85	85.854	ENSMNEG00000040853	RAB12	92	82.759	Macaca_nemestrina
ENSKMAG00000020056	rab12	100	91.322	ENSMAMG00000006862	rab12	100	92.562	Mastacembelus_armatus
ENSKMAG00000020056	rab12	100	92.181	ENSMZEG00005024316	rab12	100	93.416	Maylandia_zebra
ENSKMAG00000020056	rab12	85	81.863	ENSMGAG00000009197	RAB12	100	85.294	Meleagris_gallopavo
ENSKMAG00000020056	rab12	93	82.589	ENSMAUG00000008371	Rab12	83	81.481	Mesocricetus_auratus
ENSKMAG00000020056	rab12	92	81.696	ENSMICG00000030661	RAB12	99	82.627	Microcebus_murinus
ENSKMAG00000020056	rab12	91	82.192	ENSMOCG00000000452	Rab12	100	85.388	Microtus_ochrogaster
ENSKMAG00000020056	rab12	87	84.689	ENSMODG00000021452	RAB12	69	82.759	Monodelphis_domestica
ENSKMAG00000020056	rab12	100	89.669	ENSMALG00000015762	rab12	100	89.669	Monopterus_albus
ENSKMAG00000020056	rab12	93	82.589	MGP_CAROLIEiJ_G0021839	Rab12	84	81.893	Mus_caroli
ENSKMAG00000020056	rab12	93	82.589	ENSMUSG00000023460	Rab12	100	81.893	Mus_musculus
ENSKMAG00000020056	rab12	93	82.589	MGP_PahariEiJ_G0020826	Rab12	100	81.893	Mus_pahari
ENSKMAG00000020056	rab12	93	82.589	MGP_SPRETEiJ_G0022750	Rab12	83	81.893	Mus_spretus
ENSKMAG00000020056	rab12	100	78.601	ENSMLUG00000002883	RAB12	100	81.481	Myotis_lucifugus
ENSKMAG00000020056	rab12	92	74.554	ENSNGAG00000019722	-	100	71.605	Nannospalax_galili
ENSKMAG00000020056	rab12	86	85.437	ENSNGAG00000024103	-	99	82.403	Nannospalax_galili
ENSKMAG00000020056	rab12	100	92.181	ENSNBRG00000014428	rab12	100	93.416	Neolamprologus_brichardi
ENSKMAG00000020056	rab12	93	81.778	ENSNLEG00000006939	RAB12	100	81.148	Nomascus_leucogenys
ENSKMAG00000020056	rab12	100	77.236	ENSMEUG00000000493	RAB12	93	83.478	Notamacropus_eugenii
ENSKMAG00000020056	rab12	91	82.648	ENSODEG00000006414	RAB12	100	85.845	Octodon_degus
ENSKMAG00000020056	rab12	100	91.770	ENSONIG00000018469	rab12	100	93.004	Oreochromis_niloticus
ENSKMAG00000020056	rab12	100	92.562	ENSORLG00000003902	rab12	100	93.388	Oryzias_latipes
ENSKMAG00000020056	rab12	100	92.149	ENSORLG00020005131	rab12	100	92.975	Oryzias_latipes_hni
ENSKMAG00000020056	rab12	100	92.149	ENSORLG00015007869	rab12	100	93.388	Oryzias_latipes_hsok
ENSKMAG00000020056	rab12	100	92.562	ENSOMEG00000008191	rab12	100	93.388	Oryzias_melastigma
ENSKMAG00000020056	rab12	87	82.857	ENSOGAG00000028002	RAB12	99	86.190	Otolemur_garnettii
ENSKMAG00000020056	rab12	80	86.387	ENSOARG00000000728	RAB12	97	78.723	Ovis_aries
ENSKMAG00000020056	rab12	86	81.643	ENSPPAG00000009152	RAB12	97	85.437	Pan_paniscus
ENSKMAG00000020056	rab12	93	81.778	ENSPPRG00000024521	RAB12	100	81.148	Panthera_pardus
ENSKMAG00000020056	rab12	93	81.778	ENSPTRG00000009853	RAB12	100	81.148	Pan_troglodytes
ENSKMAG00000020056	rab12	93	80.702	ENSPANG00000009320	RAB12	100	80.162	Papio_anubis
ENSKMAG00000020056	rab12	100	87.500	ENSPKIG00000008579	rab12	100	87.500	Paramormyrops_kingsleyae
ENSKMAG00000020056	rab12	100	86.364	ENSPMGG00000001890	rab12	100	88.843	Periophthalmus_magnuspinnatus
ENSKMAG00000020056	rab12	93	83.036	ENSPEMG00000021032	Rab12	84	81.893	Peromyscus_maniculatus_bairdii
ENSKMAG00000020056	rab12	89	83.568	ENSPCIG00000010453	RAB12	58	82.759	Phascolarctos_cinereus
ENSKMAG00000020056	rab12	100	90.164	ENSPFOG00000001579	rab12	100	90.574	Poecilia_formosa
ENSKMAG00000020056	rab12	100	90.164	ENSPLAG00000013594	rab12	100	90.574	Poecilia_latipinna
ENSKMAG00000020056	rab12	100	90.164	ENSPMEG00000010417	rab12	100	90.574	Poecilia_mexicana
ENSKMAG00000020056	rab12	100	90.164	ENSPREG00000017487	rab12	100	90.984	Poecilia_reticulata
ENSKMAG00000020056	rab12	93	81.778	ENSPPYG00000009015	-	72	81.148	Pongo_abelii
ENSKMAG00000020056	rab12	93	81.333	ENSPCAG00000015007	RAB12	100	81.148	Procavia_capensis
ENSKMAG00000020056	rab12	93	81.778	ENSPCOG00000019816	RAB12	100	81.148	Propithecus_coquereli
ENSKMAG00000020056	rab12	93	81.333	ENSPVAG00000002757	RAB12	100	80.738	Pteropus_vampyrus
ENSKMAG00000020056	rab12	100	92.181	ENSPNYG00000023905	rab12	100	93.416	Pundamilia_nyererei
ENSKMAG00000020056	rab12	100	92.181	ENSPNYG00000005654	rab12	100	93.416	Pundamilia_nyererei
ENSKMAG00000020056	rab12	100	86.585	ENSPNAG00000015031	rab12	100	86.992	Pygocentrus_nattereri
ENSKMAG00000020056	rab12	93	80.889	ENSRNOG00000019295	Rab12	91	80.444	Rattus_norvegicus
ENSKMAG00000020056	rab12	92	81.696	ENSRBIG00000028760	RAB12	99	83.478	Rhinopithecus_bieti
ENSKMAG00000020056	rab12	93	81.333	ENSRROG00000019249	RAB12	94	84.444	Rhinopithecus_roxellana
ENSKMAG00000020056	rab12	95	77.293	ENSSBOG00000021125	RAB12	85	79.913	Saimiri_boliviensis_boliviensis
ENSKMAG00000020056	rab12	92	80.088	ENSSHAG00000001489	RAB12	100	80.088	Sarcophilus_harrisii
ENSKMAG00000020056	rab12	100	89.669	ENSSMAG00000012678	rab12	100	91.322	Scophthalmus_maximus
ENSKMAG00000020056	rab12	100	91.736	ENSSDUG00000008505	rab12	100	92.975	Seriola_dumerili
ENSKMAG00000020056	rab12	100	91.736	ENSSLDG00000022239	rab12	100	92.975	Seriola_lalandi_dorsalis
ENSKMAG00000020056	rab12	85	86.765	ENSSPUG00000003222	RAB12	96	83.122	Sphenodon_punctatus
ENSKMAG00000020056	rab12	100	90.947	ENSSPAG00000010822	rab12	100	92.181	Stegastes_partitus
ENSKMAG00000020056	rab12	93	81.778	ENSSSCG00000038026	RAB12	100	81.557	Sus_scrofa
ENSKMAG00000020056	rab12	93	79.221	ENSTGUG00000009889	RAB12	100	79.200	Taeniopygia_guttata
ENSKMAG00000020056	rab12	100	89.669	ENSTRUG00000024455	rab12	100	89.669	Takifugu_rubripes
ENSKMAG00000020056	rab12	100	91.736	ENSTNIG00000014859	rab12	100	91.736	Tetraodon_nigroviridis
ENSKMAG00000020056	rab12	91	81.735	ENSTTRG00000008711	RAB12	99	84.932	Tursiops_truncatus
ENSKMAG00000020056	rab12	93	81.778	ENSUAMG00000018092	RAB12	100	81.148	Ursus_americanus
ENSKMAG00000020056	rab12	92	80.995	ENSVVUG00000011748	RAB12	99	84.163	Vulpes_vulpes
ENSKMAG00000020056	rab12	89	85.514	ENSXETG00000004289	rab12	75	84.979	Xenopus_tropicalis
ENSKMAG00000020056	rab12	100	88.934	ENSXCOG00000019310	rab12	100	89.754	Xiphophorus_couchianus
ENSKMAG00000020056	rab12	100	89.344	ENSXMAG00000023617	rab12	100	90.164	Xiphophorus_maculatus