EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000020181 (Gene tree)
Gene ID: 108248447
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 10808 bases
Position: chrLWHD01000345.1:95755-106562
Accession: 108248447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000027217	DUF382	PF04037.13	1.7e-58	1	1
ENSKMAP00000027217	SAP	PF02037.27	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027559	-	3220	XM_017437226	ENSKMAP00000027217	865 (aa)	XP_017292715	UPI0007F90D1C

Gene Model

Click here to download ENSKMAG00000020181's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020181	sf3b2	84	74.079	ENSG00000087365	SF3B2	99	89.905	Homo_sapiens
ENSKMAG00000020181	sf3b2	97	82.699	ENSAPOG00000001974	sf3b2	96	83.991	Acanthochromis_polyacanthus
ENSKMAG00000020181	sf3b2	84	73.650	ENSAMEG00000017206	SF3B2	59	87.805	Ailuropoda_melanoleuca
ENSKMAG00000020181	sf3b2	100	81.278	ENSACIG00000000624	sf3b2	100	81.951	Amphilophus_citrinellus
ENSKMAG00000020181	sf3b2	100	83.146	ENSAOCG00000009207	sf3b2	100	84.157	Amphiprion_ocellaris
ENSKMAG00000020181	sf3b2	100	80.899	ENSAPEG00000002762	sf3b2	97	84.045	Amphiprion_percula
ENSKMAG00000020181	sf3b2	97	57.016	ENSACAG00000008615	SF3B2	59	73.308	Anolis_carolinensis
ENSKMAG00000020181	sf3b2	84	74.211	ENSANAG00000029120	SF3B2	60	87.970	Aotus_nancymaae
ENSKMAG00000020181	sf3b2	100	83.087	ENSACLG00000014771	sf3b2	96	88.636	Astatotilapia_calliptera
ENSKMAG00000020181	sf3b2	74	90.822	ENSAMXG00000007929	sf3b2	60	91.557	Astyanax_mexicanus
ENSKMAG00000020181	sf3b2	84	74.011	ENSBTAG00000002778	SF3B2	59	88.158	Bos_taurus
ENSKMAG00000020181	sf3b2	69	47.673	WBGene00021004	sftb-2	89	50.640	Caenorhabditis_elegans
ENSKMAG00000020181	sf3b2	84	74.211	ENSCJAG00000001656	SF3B2	60	87.970	Callithrix_jacchus
ENSKMAG00000020181	sf3b2	84	73.747	ENSCAFG00000013033	SF3B2	59	87.970	Canis_familiaris
ENSKMAG00000020181	sf3b2	84	73.747	ENSCAFG00020015382	SF3B2	59	87.970	Canis_lupus_dingo
ENSKMAG00000020181	sf3b2	84	73.879	ENSCHIG00000011211	SF3B2	59	88.158	Capra_hircus
ENSKMAG00000020181	sf3b2	84	73.816	ENSTSYG00000000959	SF3B2	60	87.970	Carlito_syrichta
ENSKMAG00000020181	sf3b2	76	70.682	ENSCPOG00000008294	SF3B2	56	88.063	Cavia_porcellus
ENSKMAG00000020181	sf3b2	84	74.211	ENSCCAG00000035256	SF3B2	60	87.970	Cebus_capucinus
ENSKMAG00000020181	sf3b2	84	74.079	ENSCATG00000042240	SF3B2	61	87.970	Cercocebus_atys
ENSKMAG00000020181	sf3b2	86	72.716	ENSCLAG00000016852	SF3B2	60	87.970	Chinchilla_lanigera
ENSKMAG00000020181	sf3b2	84	74.079	ENSCSAG00000008121	SF3B2	59	87.970	Chlorocebus_sabaeus
ENSKMAG00000020181	sf3b2	80	87.245	ENSCHOG00000001476	SF3B2	84	87.356	Choloepus_hoffmanni
ENSKMAG00000020181	sf3b2	98	65.385	ENSCPBG00000022465	SF3B2	73	88.679	Chrysemys_picta_bellii
ENSKMAG00000020181	sf3b2	61	66.920	ENSCING00000005665	-	84	66.541	Ciona_intestinalis
ENSKMAG00000020181	sf3b2	63	65.930	ENSCSAVG00000002029	-	84	66.919	Ciona_savignyi
ENSKMAG00000020181	sf3b2	84	74.079	ENSCANG00000039680	SF3B2	60	87.970	Colobus_angolensis_palliatus
ENSKMAG00000020181	sf3b2	83	73.727	ENSCGRG00001015741	Sf3b2	60	88.158	Cricetulus_griseus_chok1gshd
ENSKMAG00000020181	sf3b2	83	73.727	ENSCGRG00000018110	Sf3b2	62	88.158	Cricetulus_griseus_crigri
ENSKMAG00000020181	sf3b2	87	78.324	ENSCSEG00000000230	sf3b2	67	91.887	Cynoglossus_semilaevis
ENSKMAG00000020181	sf3b2	100	81.756	ENSCVAG00000003357	sf3b2	100	82.212	Cyprinodon_variegatus
ENSKMAG00000020181	sf3b2	97	71.019	ENSDARG00000018049	sf3b2	64	90.824	Danio_rerio
ENSKMAG00000020181	sf3b2	90	69.608	ENSDNOG00000009484	SF3B2	67	87.782	Dasypus_novemcinctus
ENSKMAG00000020181	sf3b2	83	74.263	ENSDORG00000002495	Sf3b2	60	88.158	Dipodomys_ordii
ENSKMAG00000020181	sf3b2	57	81.567	ENSETEG00000020284	SF3B2	82	81.352	Echinops_telfairi
ENSKMAG00000020181	sf3b2	89	62.698	ENSEBUG00000013703	sf3b2	88	76.966	Eptatretus_burgeri
ENSKMAG00000020181	sf3b2	84	73.386	ENSEASG00005004508	SF3B2	59	87.970	Equus_asinus_asinus
ENSKMAG00000020181	sf3b2	84	73.386	ENSECAG00000024461	SF3B2	59	87.970	Equus_caballus
ENSKMAG00000020181	sf3b2	100	73.667	ENSELUG00000005586	sf3b2	63	92.060	Esox_lucius
ENSKMAG00000020181	sf3b2	84	73.747	ENSFCAG00000013289	SF3B2	60	87.970	Felis_catus
ENSKMAG00000020181	sf3b2	77	65.970	ENSFALG00000014653	SF3B2	75	76.128	Ficedula_albicollis
ENSKMAG00000020181	sf3b2	84	72.977	ENSFDAG00000019806	SF3B2	60	87.970	Fukomys_damarensis
ENSKMAG00000020181	sf3b2	100	82.440	ENSFHEG00000020968	sf3b2	100	82.554	Fundulus_heteroclitus
ENSKMAG00000020181	sf3b2	78	80.973	ENSGMOG00000012131	sf3b2	81	91.182	Gadus_morhua
ENSKMAG00000020181	sf3b2	100	84.439	ENSGAFG00000001675	sf3b2	100	84.096	Gambusia_affinis
ENSKMAG00000020181	sf3b2	78	81.711	ENSGACG00000019012	sf3b2	100	83.800	Gasterosteus_aculeatus
ENSKMAG00000020181	sf3b2	98	67.568	ENSGAGG00000023916	SF3B2	62	88.324	Gopherus_agassizii
ENSKMAG00000020181	sf3b2	75	89.577	ENSGGOG00000028448	SF3B2	60	87.970	Gorilla_gorilla
ENSKMAG00000020181	sf3b2	100	83.087	ENSHBUG00000017349	sf3b2	100	83.201	Haplochromis_burtoni
ENSKMAG00000020181	sf3b2	83	74.263	ENSHGLG00000010807	SF3B2	60	87.970	Heterocephalus_glaber_female
ENSKMAG00000020181	sf3b2	84	74.079	ENSHGLG00100006361	SF3B2	60	87.970	Heterocephalus_glaber_male
ENSKMAG00000020181	sf3b2	100	75.395	ENSHCOG00000016203	sf3b2	62	92.264	Hippocampus_comes
ENSKMAG00000020181	sf3b2	100	69.460	ENSIPUG00000009383	sf3b2	61	89.533	Ictalurus_punctatus
ENSKMAG00000020181	sf3b2	84	73.947	ENSSTOG00000028892	SF3B2	60	87.970	Ictidomys_tridecemlineatus
ENSKMAG00000020181	sf3b2	83	73.600	ENSJJAG00000018193	Sf3b2	60	88.158	Jaculus_jaculus
ENSKMAG00000020181	sf3b2	100	82.220	ENSLBEG00000027739	sf3b2	100	83.447	Labrus_bergylta
ENSKMAG00000020181	sf3b2	85	78.082	ENSLACG00000010429	SF3B2	92	89.159	Latimeria_chalumnae
ENSKMAG00000020181	sf3b2	83	73.755	ENSLAFG00000002128	SF3B2	60	87.782	Loxodonta_africana
ENSKMAG00000020181	sf3b2	84	73.982	ENSMFAG00000003064	SF3B2	61	87.805	Macaca_fascicularis
ENSKMAG00000020181	sf3b2	84	70.053	ENSMMUG00000011743	SF3B2	60	82.143	Macaca_mulatta
ENSKMAG00000020181	sf3b2	86	72.516	ENSMNEG00000034437	SF3B2	61	87.970	Macaca_nemestrina
ENSKMAG00000020181	sf3b2	86	72.516	ENSMLEG00000029373	SF3B2	61	87.970	Mandrillus_leucophaeus
ENSKMAG00000020181	sf3b2	100	80.696	ENSMAMG00000014103	sf3b2	100	84.305	Mastacembelus_armatus
ENSKMAG00000020181	sf3b2	100	83.087	ENSMZEG00005020789	sf3b2	100	83.201	Maylandia_zebra
ENSKMAG00000020181	sf3b2	97	66.257	ENSMICG00000016942	-	63	86.654	Microcebus_murinus
ENSKMAG00000020181	sf3b2	86	72.458	ENSMICG00000008565	-	60	87.782	Microcebus_murinus
ENSKMAG00000020181	sf3b2	86	72.329	ENSMOCG00000003136	Sf3b2	60	88.158	Microtus_ochrogaster
ENSKMAG00000020181	sf3b2	100	76.431	ENSMMOG00000012928	sf3b2	62	94.697	Mola_mola
ENSKMAG00000020181	sf3b2	75	72.324	ENSMODG00000025020	-	83	80.000	Monodelphis_domestica
ENSKMAG00000020181	sf3b2	90	68.005	ENSMODG00000008490	-	65	88.324	Monodelphis_domestica
ENSKMAG00000020181	sf3b2	100	78.434	ENSMALG00000015137	sf3b2	100	77.159	Monopterus_albus
ENSKMAG00000020181	sf3b2	83	71.946	MGP_CAROLIEiJ_G0022539	Sf3b2	60	87.970	Mus_caroli
ENSKMAG00000020181	sf3b2	83	73.995	ENSMUSG00000024853	Sf3b2	60	88.158	Mus_musculus
ENSKMAG00000020181	sf3b2	83	73.458	MGP_PahariEiJ_G0014036	Sf3b2	60	87.782	Mus_pahari
ENSKMAG00000020181	sf3b2	83	73.861	MGP_SPRETEiJ_G0023453	Sf3b2	60	88.158	Mus_spretus
ENSKMAG00000020181	sf3b2	84	73.747	ENSMPUG00000011349	SF3B2	59	87.970	Mustela_putorius_furo
ENSKMAG00000020181	sf3b2	84	73.483	ENSMLUG00000011136	SF3B2	59	88.158	Myotis_lucifugus
ENSKMAG00000020181	sf3b2	83	74.094	ENSNGAG00000012103	Sf3b2	61	87.970	Nannospalax_galili
ENSKMAG00000020181	sf3b2	84	70.997	ENSNLEG00000006007	SF3B2	60	85.687	Nomascus_leucogenys
ENSKMAG00000020181	sf3b2	78	84.181	ENSMEUG00000000019	SF3B2	84	84.181	Notamacropus_eugenii
ENSKMAG00000020181	sf3b2	97	64.804	ENSODEG00000017764	SF3B2	59	82.331	Octodon_degus
ENSKMAG00000020181	sf3b2	100	84.449	ENSONIG00000013068	sf3b2	100	84.563	Oreochromis_niloticus
ENSKMAG00000020181	sf3b2	86	65.548	ENSOANG00000012482	SF3B2	86	81.460	Ornithorhynchus_anatinus
ENSKMAG00000020181	sf3b2	63	46.127	ENSOCUG00000024154	-	60	59.091	Oryctolagus_cuniculus
ENSKMAG00000020181	sf3b2	97	66.629	ENSOCUG00000015722	-	62	87.970	Oryctolagus_cuniculus
ENSKMAG00000020181	sf3b2	100	82.127	ENSORLG00000008235	sf3b2	97	81.109	Oryzias_latipes
ENSKMAG00000020181	sf3b2	100	82.127	ENSORLG00020005357	sf3b2	100	81.109	Oryzias_latipes_hni
ENSKMAG00000020181	sf3b2	100	82.240	ENSORLG00015022454	sf3b2	90	94.697	Oryzias_latipes_hsok
ENSKMAG00000020181	sf3b2	88	85.417	ENSOMEG00000017480	sf3b2	100	80.432	Oryzias_melastigma
ENSKMAG00000020181	sf3b2	97	67.189	ENSOARG00000002125	SF3B2	72	88.158	Ovis_aries
ENSKMAG00000020181	sf3b2	84	74.079	ENSPPAG00000007359	SF3B2	60	87.970	Pan_paniscus
ENSKMAG00000020181	sf3b2	84	73.747	ENSPPRG00000013334	SF3B2	60	87.970	Panthera_pardus
ENSKMAG00000020181	sf3b2	84	73.747	ENSPTIG00000015022	SF3B2	60	87.970	Panthera_tigris_altaica
ENSKMAG00000020181	sf3b2	84	74.079	ENSPTRG00000003912	SF3B2	60	87.970	Pan_troglodytes
ENSKMAG00000020181	sf3b2	84	74.079	ENSPANG00000008593	SF3B2	61	87.970	Papio_anubis
ENSKMAG00000020181	sf3b2	100	72.648	ENSPKIG00000016576	sf3b2	89	92.060	Paramormyrops_kingsleyae
ENSKMAG00000020181	sf3b2	86	73.281	ENSPSIG00000003158	SF3B2	84	88.889	Pelodiscus_sinensis
ENSKMAG00000020181	sf3b2	94	74.771	ENSPMGG00000000819	sf3b2	92	87.992	Periophthalmus_magnuspinnatus
ENSKMAG00000020181	sf3b2	83	65.912	ENSPEMG00000015451	-	68	81.426	Peromyscus_maniculatus_bairdii
ENSKMAG00000020181	sf3b2	83	73.861	ENSPEMG00000015437	Sf3b2	60	88.158	Peromyscus_maniculatus_bairdii
ENSKMAG00000020181	sf3b2	86	72.021	ENSPCIG00000008381	SF3B2	62	88.136	Phascolarctos_cinereus
ENSKMAG00000020181	sf3b2	100	85.240	ENSPFOG00000002552	sf3b2	100	84.554	Poecilia_formosa
ENSKMAG00000020181	sf3b2	100	84.668	ENSPLAG00000001471	sf3b2	100	84.897	Poecilia_latipinna
ENSKMAG00000020181	sf3b2	100	85.011	ENSPMEG00000013180	sf3b2	100	83.982	Poecilia_mexicana
ENSKMAG00000020181	sf3b2	87	86.243	ENSPREG00000002665	sf3b2	100	83.867	Poecilia_reticulata
ENSKMAG00000020181	sf3b2	84	73.844	ENSPCAG00000005129	SF3B2	59	87.782	Procavia_capensis
ENSKMAG00000020181	sf3b2	84	73.947	ENSPCOG00000025375	SF3B2	60	87.782	Propithecus_coquereli
ENSKMAG00000020181	sf3b2	93	83.056	ENSPNYG00000023594	sf3b2	100	83.333	Pundamilia_nyererei
ENSKMAG00000020181	sf3b2	100	70.824	ENSPNAG00000001891	sf3b2	60	91.745	Pygocentrus_nattereri
ENSKMAG00000020181	sf3b2	83	71.946	ENSRNOG00000020412	Sf3b2	60	87.970	Rattus_norvegicus
ENSKMAG00000020181	sf3b2	84	73.947	ENSRBIG00000034065	SF3B2	60	87.970	Rhinopithecus_bieti
ENSKMAG00000020181	sf3b2	84	73.947	ENSRROG00000034496	SF3B2	60	87.970	Rhinopithecus_roxellana
ENSKMAG00000020181	sf3b2	86	72.244	ENSSBOG00000026337	SF3B2	60	87.970	Saimiri_boliviensis_boliviensis
ENSKMAG00000020181	sf3b2	86	68.380	ENSSHAG00000010933	-	58	84.906	Sarcophilus_harrisii
ENSKMAG00000020181	sf3b2	96	57.742	ENSSHAG00000018043	-	64	73.783	Sarcophilus_harrisii
ENSKMAG00000020181	sf3b2	100	73.610	ENSSFOG00015021125	sf3b2	60	93.548	Scleropages_formosus
ENSKMAG00000020181	sf3b2	100	81.348	ENSSMAG00000004079	sf3b2	97	82.921	Scophthalmus_maximus
ENSKMAG00000020181	sf3b2	100	83.579	ENSSLDG00000006838	sf3b2	100	82.313	Seriola_lalandi_dorsalis
ENSKMAG00000020181	sf3b2	75	78.923	ENSSPUG00000009198	SF3B2	61	88.491	Sphenodon_punctatus
ENSKMAG00000020181	sf3b2	100	83.781	ENSSPAG00000004406	sf3b2	100	81.991	Stegastes_partitus
ENSKMAG00000020181	sf3b2	84	73.879	ENSSSCG00000012957	SF3B2	59	88.158	Sus_scrofa
ENSKMAG00000020181	sf3b2	100	64.294	ENSTRUG00000007611	sf3b2	83	83.114	Takifugu_rubripes
ENSKMAG00000020181	sf3b2	87	76.172	ENSTNIG00000007441	sf3b2	65	89.205	Tetraodon_nigroviridis
ENSKMAG00000020181	sf3b2	87	65.772	ENSTBEG00000004258	SF3B2	57	88.485	Tupaia_belangeri
ENSKMAG00000020181	sf3b2	84	73.615	ENSTTRG00000014339	SF3B2	59	87.970	Tursiops_truncatus
ENSKMAG00000020181	sf3b2	81	73.333	ENSUAMG00000020754	SF3B2	55	87.897	Ursus_americanus
ENSKMAG00000020181	sf3b2	84	73.747	ENSUMAG00000010994	SF3B2	59	87.970	Ursus_maritimus
ENSKMAG00000020181	sf3b2	57	85.000	ENSVPAG00000008695	SF3B2	62	85.000	Vicugna_pacos
ENSKMAG00000020181	sf3b2	84	73.747	ENSVVUG00000027029	SF3B2	59	87.970	Vulpes_vulpes
ENSKMAG00000020181	sf3b2	83	68.219	ENSXETG00000008422	sf3b2	67	84.310	Xenopus_tropicalis
ENSKMAG00000020181	sf3b2	77	94.140	ENSXCOG00000008943	sf3b2	90	94.140	Xiphophorus_couchianus
ENSKMAG00000020181	sf3b2	100	84.325	ENSXMAG00000008467	sf3b2	100	84.211	Xiphophorus_maculatus