EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000020228 (Gene tree)
Gene ID: 108238627
Gene Symbol: -
Alias: -
Full Name: apoptotic chromatin condensation inducer in the nucleus
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 15979 bases
Position: chrLWHD01000056.1:409678-425656
Accession: 108238627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000027290	SAP	PF02037.27	9.4e-10	1	1
ENSKMAP00000027276	SAP	PF02037.27	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027618	-	6203	XM_017420836	ENSKMAP00000027276	1713 (aa)	XP_017276325	UPI0007F89BEB
ENSKMAT00000027632	-	4364	-	ENSKMAP00000027290	1240 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000020228's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03013	RNA transport	KEGG
kmr03015	mRNA surveillance pathway	KEGG
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020228	-	99	73.471	ENSAPOG00000015331	-	69	67.229	Acanthochromis_polyacanthus
ENSKMAG00000020228	-	96	74.165	ENSAOCG00000016504	-	66	63.708	Amphiprion_ocellaris
ENSKMAG00000020228	-	96	74.068	ENSAPEG00000020100	-	60	73.006	Amphiprion_percula
ENSKMAG00000020228	-	96	66.858	ENSATEG00000007348	-	97	60.543	Anabas_testudineus
ENSKMAG00000020228	-	96	76.705	ENSACLG00000019938	-	97	66.431	Astatotilapia_calliptera
ENSKMAG00000020228	-	66	64.512	ENSCSEG00000021145	acin1a	94	62.044	Cynoglossus_semilaevis
ENSKMAG00000020228	-	54	94.681	ENSELUG00000004511	acin1a	73	94.175	Esox_lucius
ENSKMAG00000020228	-	66	96.040	ENSGMOG00000014877	acin1a	67	96.040	Gadus_morhua
ENSKMAG00000020228	-	88	63.150	ENSGAFG00000015171	-	94	79.302	Gambusia_affinis
ENSKMAG00000020228	-	82	65.608	ENSGACG00000014063	acin1a	93	65.608	Gasterosteus_aculeatus
ENSKMAG00000020228	-	96	64.178	ENSHBUG00000002970	-	99	63.764	Haplochromis_burtoni
ENSKMAG00000020228	-	99	56.175	ENSHCOG00000016677	-	94	55.000	Hippocampus_comes
ENSKMAG00000020228	-	96	76.705	ENSMZEG00005012139	-	97	66.431	Maylandia_zebra
ENSKMAG00000020228	-	65	94.393	ENSONIG00000015556	acin1a	82	90.909	Oreochromis_niloticus
ENSKMAG00000020228	-	58	69.010	ENSORLG00000012188	-	95	62.874	Oryzias_latipes
ENSKMAG00000020228	-	57	70.794	ENSORLG00020007737	-	95	63.599	Oryzias_latipes_hni
ENSKMAG00000020228	-	56	65.714	ENSORLG00015002304	-	96	62.757	Oryzias_latipes_hsok
ENSKMAG00000020228	-	99	63.776	ENSOMEG00000013014	-	97	61.477	Oryzias_melastigma
ENSKMAG00000020228	-	86	52.341	ENSPMGG00000019929	-	92	88.462	Periophthalmus_magnuspinnatus
ENSKMAG00000020228	-	85	70.175	ENSPFOG00000016546	-	96	63.673	Poecilia_formosa
ENSKMAG00000020228	-	91	76.099	ENSPLAG00000018260	-	96	64.828	Poecilia_latipinna
ENSKMAG00000020228	-	60	64.894	ENSSFOG00015011452	-	64	70.122	Scleropages_formosus
ENSKMAG00000020228	-	99	62.979	ENSSMAG00000014213	-	93	61.044	Scophthalmus_maximus
ENSKMAG00000020228	-	83	66.769	ENSSDUG00000012164	-	94	63.739	Seriola_dumerili
ENSKMAG00000020228	-	95	67.328	ENSSPAG00000023019	-	69	68.400	Stegastes_partitus
ENSKMAG00000020228	-	95	61.538	ENSTRUG00000023910	-	99	53.008	Takifugu_rubripes
ENSKMAG00000020228	-	53	91.429	ENSTNIG00000007936	acin1a	92	91.429	Tetraodon_nigroviridis