EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000020250 (Gene tree)
Gene ID: 108237305
Gene Symbol: rab4a
Alias: fc93b03|wu:fc93b03
Full Name: RAB4A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4538 bases
Position: chrLWHD01000045.1:2623714-2628251
Accession: 108237305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000027307	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027664	-	615	-	ENSKMAP00000027322	204 (aa)	-	-
ENSKMAT00000027649	-	2382	XM_017418632	ENSKMAP00000027307	213 (aa)	XP_017274121	UPI000644B737

Gene Model

Click here to download ENSKMAG00000020250's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020250's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000020250	rab4a	80	54.386	ENSKMAG00000006170	-	77	54.386
ENSKMAG00000020250	rab4a	72	33.333	ENSKMAG00000012723	rabl2	67	33.333
ENSKMAG00000020250	rab4a	75	36.585	ENSKMAG00000006593	rab33a	77	36.585
ENSKMAG00000020250	rab4a	82	38.286	ENSKMAG00000002545	-	83	38.286
ENSKMAG00000020250	rab4a	79	40.000	ENSKMAG00000003494	si:dkey-16l2.16	85	37.778
ENSKMAG00000020250	rab4a	80	40.936	ENSKMAG00000018973	-	77	40.936
ENSKMAG00000020250	rab4a	97	34.123	ENSKMAG00000002862	zgc:101559	85	34.123
ENSKMAG00000020250	rab4a	83	45.763	ENSKMAG00000004439	rab30	87	45.763
ENSKMAG00000020250	rab4a	68	40.000	ENSKMAG00000020034	-	51	40.000
ENSKMAG00000020250	rab4a	76	43.478	ENSKMAG00000020038	rab5c	89	39.614
ENSKMAG00000020250	rab4a	97	38.571	ENSKMAG00000012778	si:dkey-34d22.5	95	38.571
ENSKMAG00000020250	rab4a	83	46.591	ENSKMAG00000017357	rab1ab	87	46.591
ENSKMAG00000020250	rab4a	89	42.188	ENSKMAG00000008625	RAB39B	90	42.188
ENSKMAG00000020250	rab4a	76	33.333	ENSKMAG00000001922	Ha-ras	85	33.333
ENSKMAG00000020250	rab4a	85	34.595	ENSKMAG00000019647	rab34a	68	34.595
ENSKMAG00000020250	rab4a	81	32.386	ENSKMAG00000019397	rhebl1	92	32.386
ENSKMAG00000020250	rab4a	82	46.857	ENSKMAG00000009856	zgc:171927	82	46.857
ENSKMAG00000020250	rab4a	96	39.806	ENSKMAG00000017417	-	89	39.806
ENSKMAG00000020250	rab4a	99	58.571	ENSKMAG00000011301	-	97	58.571
ENSKMAG00000020250	rab4a	81	33.333	ENSKMAG00000003938	kras	93	33.333
ENSKMAG00000020250	rab4a	76	43.478	ENSKMAG00000005111	rab5aa	75	43.478
ENSKMAG00000020250	rab4a	98	53.589	ENSKMAG00000009799	rab2a	98	53.589
ENSKMAG00000020250	rab4a	83	34.637	ENSKMAG00000019341	rab34b	70	34.637
ENSKMAG00000020250	rab4a	80	54.386	ENSKMAG00000009033	rab11bb	77	54.386
ENSKMAG00000020250	rab4a	82	38.286	ENSKMAG00000011278	rab6bb	84	38.286
ENSKMAG00000020250	rab4a	77	38.095	ENSKMAG00000019964	rab9b	83	38.095
ENSKMAG00000020250	rab4a	84	50.838	ENSKMAG00000015516	rab11al	83	50.838
ENSKMAG00000020250	rab4a	76	43.210	ENSKMAG00000006854	rab35b	80	43.210
ENSKMAG00000020250	rab4a	86	36.082	ENSKMAG00000020013	-	94	36.082
ENSKMAG00000020250	rab4a	91	36.410	ENSKMAG00000007267	rab42a	89	36.410
ENSKMAG00000020250	rab4a	80	35.795	ENSKMAG00000011954	dnajc27	64	35.795
ENSKMAG00000020250	rab4a	81	45.349	ENSKMAG00000001908	rab13	86	45.679
ENSKMAG00000020250	rab4a	72	33.766	ENSKMAG00000018270	rab23	74	33.333
ENSKMAG00000020250	rab4a	99	41.905	ENSKMAG00000014038	-	94	41.905
ENSKMAG00000020250	rab4a	81	34.104	ENSKMAG00000020733	rras	87	34.104
ENSKMAG00000020250	rab4a	96	47.059	ENSKMAG00000011905	rab11a	94	47.059
ENSKMAG00000020250	rab4a	68	37.415	ENSKMAG00000003105	rab33ba	63	37.415
ENSKMAG00000020250	rab4a	80	53.801	ENSKMAG00000006082	-	77	53.801
ENSKMAG00000020250	rab4a	89	43.455	ENSKMAG00000007364	rab18b	92	43.455
ENSKMAG00000020250	rab4a	99	59.048	ENSKMAG00000017487	rab14	97	59.048
ENSKMAG00000020250	rab4a	83	50.000	ENSKMAG00000004945	rab25a	83	50.000
ENSKMAG00000020250	rab4a	87	33.862	ENSKMAG00000021039	si:dkey-13a21.4	79	33.862
ENSKMAG00000020250	rab4a	77	34.503	ENSKMAG00000017150	-	76	34.503
ENSKMAG00000020250	rab4a	77	36.905	ENSKMAG00000003646	-	84	36.905
ENSKMAG00000020250	rab4a	76	40.373	ENSKMAG00000014705	rab22a	83	40.373
ENSKMAG00000020250	rab4a	83	47.727	ENSKMAG00000015488	rab25b	85	47.727
ENSKMAG00000020250	rab4a	100	38.785	ENSKMAG00000001191	RAB15	100	38.785
ENSKMAG00000020250	rab4a	54	31.092	ENSKMAG00000013576	arl8	63	31.092
ENSKMAG00000020250	rab4a	76	35.329	ENSKMAG00000017662	rab9a	82	35.329
ENSKMAG00000020250	rab4a	75	33.939	ENSKMAG00000003080	si:cabz01085950.1	81	33.939
ENSKMAG00000020250	rab4a	83	47.159	ENSKMAG00000006810	rab1ba	88	47.159
ENSKMAG00000020250	rab4a	100	34.842	ENSKMAG00000006812	RAB7A	100	34.842
ENSKMAG00000020250	rab4a	71	42.105	ENSKMAG00000013146	-	79	42.105
ENSKMAG00000020250	rab4a	79	40.828	ENSKMAG00000020056	rab12	71	40.828
ENSKMAG00000020250	rab4a	86	39.891	ENSKMAG00000020392	rab15	85	39.891
ENSKMAG00000020250	rab4a	89	39.791	ENSKMAG00000012657	-	81	39.791
ENSKMAG00000020250	rab4a	56	31.707	ENSKMAG00000011323	arl5c	65	31.707
ENSKMAG00000020250	rab4a	74	41.139	ENSKMAG00000015507	rab6ba	76	41.139

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020250	rab4a	100	99.061	ENSCVAG00000010727	rab4a	100	99.061	Cyprinodon_variegatus
ENSKMAG00000020250	rab4a	100	95.305	ENSELUG00000014785	rab4a	100	95.305	Esox_lucius
ENSKMAG00000020250	rab4a	100	100.000	ENSFHEG00000010509	rab4a	100	100.000	Fundulus_heteroclitus
ENSKMAG00000020250	rab4a	100	99.061	ENSGAFG00000005477	rab4a	100	99.061	Gambusia_affinis
ENSKMAG00000020250	rab4a	100	97.664	ENSGACG00000016164	rab4a	98	97.664	Gasterosteus_aculeatus
ENSKMAG00000020250	rab4a	100	98.592	ENSLBEG00000003101	rab4a	100	98.592	Labrus_bergylta
ENSKMAG00000020250	rab4a	100	97.653	ENSMMOG00000015287	rab4a	100	97.653	Mola_mola
ENSKMAG00000020250	rab4a	100	99.061	ENSPFOG00000014630	rab4a	100	99.061	Poecilia_formosa
ENSKMAG00000020250	rab4a	100	99.061	ENSPLAG00000014563	rab4a	100	99.061	Poecilia_latipinna
ENSKMAG00000020250	rab4a	100	99.061	ENSPMEG00000012205	rab4a	100	99.061	Poecilia_mexicana
ENSKMAG00000020250	rab4a	100	99.061	ENSPREG00000010154	rab4a	100	99.061	Poecilia_reticulata
ENSKMAG00000020250	rab4a	100	94.836	ENSSFOG00015015336	rab4a	100	94.836	Scleropages_formosus
ENSKMAG00000020250	rab4a	100	99.061	ENSXMAG00000026193	rab4a	100	99.061	Xiphophorus_maculatus