EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000020427 (Gene tree)
Gene ID: 108240812
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 12124 bases
Position: chrLWHD01000080.1:1246352-1258475
Accession: 108240812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000027546	NMD3	PF04981.13	5.9e-81	1	1
ENSKMAP00000027570	NMD3	PF04981.13	5.8e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027916	-	3133	XM_025007740	ENSKMAP00000027570	551 (aa)	XP_024863508	-
ENSKMAT00000027892	-	3111	XM_017424593	ENSKMAP00000027546	504 (aa)	XP_017280082	UPI0007F90745

Gene Model

Click here to download ENSKMAG00000020427's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG
kmr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020427's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020427	nmd3	99	78.175	ENSG00000169251	NMD3	100	79.817	Homo_sapiens
ENSKMAG00000020427	nmd3	100	94.246	ENSAPOG00000022912	nmd3	100	94.246	Acanthochromis_polyacanthus
ENSKMAG00000020427	nmd3	99	78.218	ENSAMEG00000001584	NMD3	99	78.218	Ailuropoda_melanoleuca
ENSKMAG00000020427	nmd3	100	88.889	ENSACIG00000015196	nmd3	100	88.889	Amphilophus_citrinellus
ENSKMAG00000020427	nmd3	100	95.238	ENSAOCG00000009086	nmd3	100	95.238	Amphiprion_ocellaris
ENSKMAG00000020427	nmd3	100	94.841	ENSAPEG00000000329	nmd3	100	94.841	Amphiprion_percula
ENSKMAG00000020427	nmd3	100	93.849	ENSATEG00000014351	nmd3	100	93.849	Anabas_testudineus
ENSKMAG00000020427	nmd3	100	76.634	ENSAPLG00000014786	NMD3	100	76.634	Anas_platyrhynchos
ENSKMAG00000020427	nmd3	100	80.198	ENSACAG00000007349	NMD3	100	80.198	Anolis_carolinensis
ENSKMAG00000020427	nmd3	99	78.156	ENSANAG00000026434	NMD3	99	78.156	Aotus_nancymaae
ENSKMAG00000020427	nmd3	100	93.849	ENSACLG00000015520	nmd3	100	93.849	Astatotilapia_calliptera
ENSKMAG00000020427	nmd3	100	89.286	ENSAMXG00000014415	nmd3	100	89.286	Astyanax_mexicanus
ENSKMAG00000020427	nmd3	99	77.579	ENSBTAG00000016228	NMD3	100	77.579	Bos_taurus
ENSKMAG00000020427	nmd3	98	50.600	WBGene00012030	T25G3.3	97	50.600	Caenorhabditis_elegans
ENSKMAG00000020427	nmd3	99	78.514	ENSCJAG00000002900	NMD3	97	78.514	Callithrix_jacchus
ENSKMAG00000020427	nmd3	99	77.510	ENSCAFG00000014352	NMD3	97	77.510	Canis_familiaris
ENSKMAG00000020427	nmd3	99	77.183	ENSCAFG00020021145	NMD3	99	77.183	Canis_lupus_dingo
ENSKMAG00000020427	nmd3	99	77.381	ENSCHIG00000016015	NMD3	100	77.381	Capra_hircus
ENSKMAG00000020427	nmd3	99	78.373	ENSTSYG00000002155	NMD3	99	78.373	Carlito_syrichta
ENSKMAG00000020427	nmd3	79	77.000	ENSCAPG00000017861	NMD3	93	77.000	Cavia_aperea
ENSKMAG00000020427	nmd3	87	77.574	ENSCPOG00000005953	NMD3	94	77.574	Cavia_porcellus
ENSKMAG00000020427	nmd3	99	78.373	ENSCCAG00000037460	NMD3	100	78.373	Cebus_capucinus
ENSKMAG00000020427	nmd3	99	78.770	ENSCATG00000030022	NMD3	100	78.770	Cercocebus_atys
ENSKMAG00000020427	nmd3	99	78.373	ENSCLAG00000003155	NMD3	100	78.373	Chinchilla_lanigera
ENSKMAG00000020427	nmd3	99	78.770	ENSCSAG00000012333	NMD3	100	78.770	Chlorocebus_sabaeus
ENSKMAG00000020427	nmd3	80	77.465	ENSCHOG00000001240	NMD3	80	77.465	Choloepus_hoffmanni
ENSKMAG00000020427	nmd3	99	81.548	ENSCPBG00000018318	NMD3	99	82.068	Chrysemys_picta_bellii
ENSKMAG00000020427	nmd3	97	54.878	ENSCING00000002129	-	97	54.878	Ciona_intestinalis
ENSKMAG00000020427	nmd3	87	55.227	ENSCSAVG00000001120	-	98	54.831	Ciona_savignyi
ENSKMAG00000020427	nmd3	99	73.161	ENSCANG00000042939	NMD3	95	72.763	Colobus_angolensis_palliatus
ENSKMAG00000020427	nmd3	91	68.980	ENSCGRG00001001792	Nmd3	97	68.980	Cricetulus_griseus_chok1gshd
ENSKMAG00000020427	nmd3	97	78.208	ENSCGRG00000007947	Nmd3	98	78.208	Cricetulus_griseus_crigri
ENSKMAG00000020427	nmd3	100	92.659	ENSCSEG00000017954	nmd3	100	92.659	Cynoglossus_semilaevis
ENSKMAG00000020427	nmd3	100	84.524	ENSCVAG00000004672	nmd3	100	84.921	Cyprinodon_variegatus
ENSKMAG00000020427	nmd3	100	86.733	ENSDARG00000015676	nmd3	100	86.733	Danio_rerio
ENSKMAG00000020427	nmd3	99	77.381	ENSDNOG00000045222	NMD3	100	77.381	Dasypus_novemcinctus
ENSKMAG00000020427	nmd3	97	70.348	ENSDORG00000005716	Nmd3	100	69.737	Dipodomys_ordii
ENSKMAG00000020427	nmd3	98	54.509	FBgn0023542	Nmd3	95	54.309	Drosophila_melanogaster
ENSKMAG00000020427	nmd3	99	68.056	ENSETEG00000003168	NMD3	99	68.056	Echinops_telfairi
ENSKMAG00000020427	nmd3	89	60.356	ENSEBUG00000014316	nmd3	97	60.356	Eptatretus_burgeri
ENSKMAG00000020427	nmd3	99	77.976	ENSEASG00005018672	NMD3	100	77.976	Equus_asinus_asinus
ENSKMAG00000020427	nmd3	99	77.689	ENSECAG00000000188	NMD3	98	77.689	Equus_caballus
ENSKMAG00000020427	nmd3	94	58.263	ENSEEUG00000010642	-	100	58.263	Erinaceus_europaeus
ENSKMAG00000020427	nmd3	100	89.286	ENSELUG00000024123	nmd3	100	89.286	Esox_lucius
ENSKMAG00000020427	nmd3	99	78.715	ENSFCAG00000022867	NMD3	99	78.571	Felis_catus
ENSKMAG00000020427	nmd3	94	80.000	ENSFALG00000008711	NMD3	100	80.000	Ficedula_albicollis
ENSKMAG00000020427	nmd3	99	77.030	ENSFDAG00000013724	-	100	77.030	Fukomys_damarensis
ENSKMAG00000020427	nmd3	97	64.300	ENSFDAG00000012197	-	98	65.298	Fukomys_damarensis
ENSKMAG00000020427	nmd3	100	93.849	ENSFHEG00000000415	nmd3	100	93.849	Fundulus_heteroclitus
ENSKMAG00000020427	nmd3	97	87.526	ENSGMOG00000009675	nmd3	100	87.526	Gadus_morhua
ENSKMAG00000020427	nmd3	100	78.614	ENSGALG00000009533	NMD3	100	78.614	Gallus_gallus
ENSKMAG00000020427	nmd3	99	93.800	ENSGAFG00000012798	nmd3	94	94.366	Gambusia_affinis
ENSKMAG00000020427	nmd3	100	91.468	ENSGACG00000010028	nmd3	100	91.468	Gasterosteus_aculeatus
ENSKMAG00000020427	nmd3	99	80.754	ENSGAGG00000006556	NMD3	99	80.754	Gopherus_agassizii
ENSKMAG00000020427	nmd3	99	78.571	ENSGGOG00000007157	NMD3	100	78.571	Gorilla_gorilla
ENSKMAG00000020427	nmd3	99	63.618	ENSGGOG00000028590	-	99	63.618	Gorilla_gorilla
ENSKMAG00000020427	nmd3	100	93.849	ENSHBUG00000001781	nmd3	100	93.849	Haplochromis_burtoni
ENSKMAG00000020427	nmd3	99	77.976	ENSHGLG00000014451	-	100	77.976	Heterocephalus_glaber_female
ENSKMAG00000020427	nmd3	99	63.095	ENSHGLG00000010477	-	100	63.095	Heterocephalus_glaber_female
ENSKMAG00000020427	nmd3	99	63.492	ENSHGLG00100001042	-	100	63.492	Heterocephalus_glaber_male
ENSKMAG00000020427	nmd3	99	77.976	ENSHGLG00100006613	-	100	77.976	Heterocephalus_glaber_male
ENSKMAG00000020427	nmd3	99	90.438	ENSHCOG00000004292	nmd3	92	90.438	Hippocampus_comes
ENSKMAG00000020427	nmd3	100	85.317	ENSIPUG00000005073	nmd3	100	85.317	Ictalurus_punctatus
ENSKMAG00000020427	nmd3	99	78.770	ENSSTOG00000001899	NMD3	100	78.770	Ictidomys_tridecemlineatus
ENSKMAG00000020427	nmd3	97	79.346	ENSJJAG00000019759	Nmd3	99	79.346	Jaculus_jaculus
ENSKMAG00000020427	nmd3	100	91.502	ENSLBEG00000022216	nmd3	100	91.502	Labrus_bergylta
ENSKMAG00000020427	nmd3	99	78.357	ENSLACG00000005731	NMD3	99	81.922	Latimeria_chalumnae
ENSKMAG00000020427	nmd3	100	87.327	ENSLOCG00000003561	nmd3	100	87.327	Lepisosteus_oculatus
ENSKMAG00000020427	nmd3	99	75.842	ENSLAFG00000007231	NMD3	100	75.842	Loxodonta_africana
ENSKMAG00000020427	nmd3	99	78.571	ENSMFAG00000040934	NMD3	100	78.571	Macaca_fascicularis
ENSKMAG00000020427	nmd3	99	77.734	ENSMMUG00000009564	NMD3	99	77.885	Macaca_mulatta
ENSKMAG00000020427	nmd3	99	78.571	ENSMNEG00000034626	NMD3	100	78.571	Macaca_nemestrina
ENSKMAG00000020427	nmd3	88	78.829	ENSMLEG00000002741	NMD3	100	78.829	Mandrillus_leucophaeus
ENSKMAG00000020427	nmd3	100	91.865	ENSMAMG00000012427	nmd3	100	91.865	Mastacembelus_armatus
ENSKMAG00000020427	nmd3	100	93.849	ENSMZEG00005016888	nmd3	100	93.849	Maylandia_zebra
ENSKMAG00000020427	nmd3	100	78.614	ENSMGAG00000010498	NMD3	100	78.614	Meleagris_gallopavo
ENSKMAG00000020427	nmd3	99	77.579	ENSMAUG00000000633	Nmd3	100	77.579	Mesocricetus_auratus
ENSKMAG00000020427	nmd3	99	78.175	ENSMICG00000049196	NMD3	100	78.175	Microcebus_murinus
ENSKMAG00000020427	nmd3	99	77.137	ENSMOCG00000005180	Nmd3	100	77.137	Microtus_ochrogaster
ENSKMAG00000020427	nmd3	100	91.881	ENSMMOG00000012765	nmd3	100	91.881	Mola_mola
ENSKMAG00000020427	nmd3	99	61.896	ENSMODG00000016296	NMD3	100	62.500	Monodelphis_domestica
ENSKMAG00000020427	nmd3	100	93.651	ENSMALG00000009256	nmd3	100	93.651	Monopterus_albus
ENSKMAG00000020427	nmd3	99	77.381	MGP_CAROLIEiJ_G0025069	Nmd3	100	77.381	Mus_caroli
ENSKMAG00000020427	nmd3	99	77.183	ENSMUSG00000027787	Nmd3	100	77.183	Mus_musculus
ENSKMAG00000020427	nmd3	99	77.183	MGP_PahariEiJ_G0026512	Nmd3	100	77.183	Mus_pahari
ENSKMAG00000020427	nmd3	99	77.381	MGP_SPRETEiJ_G0026011	Nmd3	100	77.381	Mus_spretus
ENSKMAG00000020427	nmd3	99	78.175	ENSMPUG00000002955	NMD3	99	78.175	Mustela_putorius_furo
ENSKMAG00000020427	nmd3	97	75.813	ENSMLUG00000000701	NMD3	97	75.813	Myotis_lucifugus
ENSKMAG00000020427	nmd3	99	77.535	ENSNGAG00000012307	Nmd3	99	77.535	Nannospalax_galili
ENSKMAG00000020427	nmd3	100	92.857	ENSNBRG00000003324	nmd3	100	92.857	Neolamprologus_brichardi
ENSKMAG00000020427	nmd3	99	78.373	ENSNLEG00000004655	NMD3	100	78.373	Nomascus_leucogenys
ENSKMAG00000020427	nmd3	73	69.298	ENSOPRG00000007690	-	73	69.298	Ochotona_princeps
ENSKMAG00000020427	nmd3	99	78.373	ENSODEG00000006270	NMD3	100	78.373	Octodon_degus
ENSKMAG00000020427	nmd3	100	93.651	ENSONIG00000003643	nmd3	100	93.651	Oreochromis_niloticus
ENSKMAG00000020427	nmd3	99	77.844	ENSOCUG00000017454	NMD3	100	77.844	Oryctolagus_cuniculus
ENSKMAG00000020427	nmd3	100	93.452	ENSORLG00000006279	nmd3	100	93.452	Oryzias_latipes
ENSKMAG00000020427	nmd3	100	93.651	ENSORLG00020003843	nmd3	100	93.651	Oryzias_latipes_hni
ENSKMAG00000020427	nmd3	100	93.254	ENSORLG00015006379	nmd3	100	93.254	Oryzias_latipes_hsok
ENSKMAG00000020427	nmd3	100	94.444	ENSOMEG00000012144	nmd3	100	94.444	Oryzias_melastigma
ENSKMAG00000020427	nmd3	99	78.175	ENSOGAG00000014910	NMD3	100	78.175	Otolemur_garnettii
ENSKMAG00000020427	nmd3	99	77.800	ENSOARG00000001883	NMD3	97	77.800	Ovis_aries
ENSKMAG00000020427	nmd3	99	78.175	ENSPPAG00000043829	NMD3	100	78.175	Pan_paniscus
ENSKMAG00000020427	nmd3	99	78.330	ENSPPRG00000000724	NMD3	98	78.330	Panthera_pardus
ENSKMAG00000020427	nmd3	99	78.373	ENSPTIG00000016761	NMD3	99	78.373	Panthera_tigris_altaica
ENSKMAG00000020427	nmd3	99	78.175	ENSPTRG00000015586	NMD3	100	78.175	Pan_troglodytes
ENSKMAG00000020427	nmd3	99	77.932	ENSPANG00000006665	NMD3	95	77.932	Papio_anubis
ENSKMAG00000020427	nmd3	100	87.500	ENSPKIG00000009928	nmd3	100	87.500	Paramormyrops_kingsleyae
ENSKMAG00000020427	nmd3	100	81.188	ENSPSIG00000007591	NMD3	100	81.188	Pelodiscus_sinensis
ENSKMAG00000020427	nmd3	100	87.897	ENSPMGG00000014015	nmd3	100	87.897	Periophthalmus_magnuspinnatus
ENSKMAG00000020427	nmd3	99	77.579	ENSPEMG00000021880	Nmd3	100	77.579	Peromyscus_maniculatus_bairdii
ENSKMAG00000020427	nmd3	99	80.952	ENSPCIG00000020869	NMD3	100	80.952	Phascolarctos_cinereus
ENSKMAG00000020427	nmd3	100	95.040	ENSPFOG00000012103	nmd3	100	95.040	Poecilia_formosa
ENSKMAG00000020427	nmd3	100	95.238	ENSPLAG00000008087	nmd3	100	95.238	Poecilia_latipinna
ENSKMAG00000020427	nmd3	100	95.040	ENSPMEG00000008506	nmd3	100	95.040	Poecilia_mexicana
ENSKMAG00000020427	nmd3	100	95.040	ENSPREG00000001848	nmd3	100	95.040	Poecilia_reticulata
ENSKMAG00000020427	nmd3	99	78.373	ENSPPYG00000014263	NMD3	100	78.373	Pongo_abelii
ENSKMAG00000020427	nmd3	91	64.130	ENSPCAG00000009851	NMD3	100	64.130	Procavia_capensis
ENSKMAG00000020427	nmd3	85	73.950	ENSPVAG00000003301	NMD3	85	73.950	Pteropus_vampyrus
ENSKMAG00000020427	nmd3	100	93.651	ENSPNYG00000006778	nmd3	100	93.651	Pundamilia_nyererei
ENSKMAG00000020427	nmd3	100	88.690	ENSPNAG00000009442	nmd3	100	88.690	Pygocentrus_nattereri
ENSKMAG00000020427	nmd3	99	76.786	ENSRNOG00000009310	Nmd3	100	76.786	Rattus_norvegicus
ENSKMAG00000020427	nmd3	99	74.405	ENSRBIG00000040379	NMD3	100	74.405	Rhinopithecus_bieti
ENSKMAG00000020427	nmd3	99	78.175	ENSRROG00000036181	NMD3	100	78.175	Rhinopithecus_roxellana
ENSKMAG00000020427	nmd3	96	43.787	YHR170W	NMD3	96	43.701	Saccharomyces_cerevisiae
ENSKMAG00000020427	nmd3	99	77.800	ENSSBOG00000024021	NMD3	99	77.800	Saimiri_boliviensis_boliviensis
ENSKMAG00000020427	nmd3	99	75.198	ENSSHAG00000016044	NMD3	100	75.198	Sarcophilus_harrisii
ENSKMAG00000020427	nmd3	100	88.095	ENSSFOG00015003609	nmd3	100	88.095	Scleropages_formosus
ENSKMAG00000020427	nmd3	100	91.270	ENSSMAG00000012887	nmd3	100	91.270	Scophthalmus_maximus
ENSKMAG00000020427	nmd3	100	94.048	ENSSDUG00000023721	nmd3	100	94.048	Seriola_dumerili
ENSKMAG00000020427	nmd3	100	93.849	ENSSLDG00000006565	nmd3	100	93.849	Seriola_lalandi_dorsalis
ENSKMAG00000020427	nmd3	97	78.937	ENSSARG00000010402	NMD3	99	78.937	Sorex_araneus
ENSKMAG00000020427	nmd3	99	79.600	ENSSPUG00000018791	NMD3	100	79.600	Sphenodon_punctatus
ENSKMAG00000020427	nmd3	100	93.651	ENSSPAG00000014328	nmd3	100	93.651	Stegastes_partitus
ENSKMAG00000020427	nmd3	99	77.510	ENSSSCG00000022952	NMD3	100	77.381	Sus_scrofa
ENSKMAG00000020427	nmd3	99	79.563	ENSTGUG00000011140	-	100	79.563	Taeniopygia_guttata
ENSKMAG00000020427	nmd3	91	78.091	ENSTGUG00000015141	-	100	78.091	Taeniopygia_guttata
ENSKMAG00000020427	nmd3	100	92.262	ENSTRUG00000005958	nmd3	100	92.262	Takifugu_rubripes
ENSKMAG00000020427	nmd3	99	56.746	ENSTBEG00000011783	-	100	56.746	Tupaia_belangeri
ENSKMAG00000020427	nmd3	99	73.214	ENSTTRG00000012938	NMD3	100	73.214	Tursiops_truncatus
ENSKMAG00000020427	nmd3	82	76.886	ENSUAMG00000009305	-	99	78.109	Ursus_americanus
ENSKMAG00000020427	nmd3	99	78.557	ENSUMAG00000011070	NMD3	99	78.514	Ursus_maritimus
ENSKMAG00000020427	nmd3	99	77.381	ENSVPAG00000008779	NMD3	100	77.381	Vicugna_pacos
ENSKMAG00000020427	nmd3	99	77.711	ENSVVUG00000023055	NMD3	99	77.711	Vulpes_vulpes
ENSKMAG00000020427	nmd3	100	82.376	ENSXETG00000027727	nmd3	100	82.376	Xenopus_tropicalis
ENSKMAG00000020427	nmd3	59	97.561	ENSXCOG00000012490	nmd3	86	97.531	Xiphophorus_couchianus
ENSKMAG00000020427	nmd3	100	94.841	ENSXMAG00000018406	nmd3	100	94.841	Xiphophorus_maculatus