EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000020455 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5696 bases
Position: chrLWHD01000156.1:754414-760109
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000027669	RVT_1	PF00078.27	7.7e-43	1	1
ENSKMAP00000027669	Exo_endo_phos	PF03372.23	5.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000028015	-	5696	-	ENSKMAP00000027669	1264 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000020455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000020455	-	84	40.131	ENSKMAG00000000374	-	99	40.131
ENSKMAG00000020455	-	99	35.159	ENSKMAG00000015152	-	99	35.159
ENSKMAG00000020455	-	99	37.619	ENSKMAG00000002570	-	99	37.619
ENSKMAG00000020455	-	99	34.022	ENSKMAG00000018279	-	99	33.863
ENSKMAG00000020455	-	69	38.673	ENSKMAG00000015838	-	99	38.673
ENSKMAG00000020455	-	78	35.585	ENSKMAG00000006893	-	99	35.585
ENSKMAG00000020455	-	51	30.108	ENSKMAG00000018235	-	67	30.108
ENSKMAG00000020455	-	99	35.090	ENSKMAG00000008495	-	99	34.933
ENSKMAG00000020455	-	79	33.598	ENSKMAG00000006263	-	99	33.598
ENSKMAG00000020455	-	64	38.841	ENSKMAG00000009272	-	99	38.841
ENSKMAG00000020455	-	88	36.299	ENSKMAG00000000885	-	99	36.299
ENSKMAG00000020455	-	89	40.160	ENSKMAG00000016041	-	99	40.160
ENSKMAG00000020455	-	63	32.709	ENSKMAG00000015028	-	99	32.709
ENSKMAG00000020455	-	99	38.933	ENSKMAG00000007098	-	99	38.933
ENSKMAG00000020455	-	99	39.155	ENSKMAG00000022168	-	99	39.155
ENSKMAG00000020455	-	99	35.090	ENSKMAG00000006247	-	99	34.933
ENSKMAG00000020455	-	91	38.315	ENSKMAG00000015935	-	99	38.315
ENSKMAG00000020455	-	99	33.150	ENSKMAG00000014428	-	99	33.071
ENSKMAG00000020455	-	86	35.839	ENSKMAG00000000167	-	99	35.839
ENSKMAG00000020455	-	99	39.396	ENSKMAG00000009901	-	99	39.396
ENSKMAG00000020455	-	61	38.802	ENSKMAG00000014507	-	99	38.802
ENSKMAG00000020455	-	98	33.675	ENSKMAG00000020345	-	99	33.517
ENSKMAG00000020455	-	69	44.165	ENSKMAG00000020777	-	99	44.165
ENSKMAG00000020455	-	79	33.628	ENSKMAG00000003480	-	99	33.628
ENSKMAG00000020455	-	99	36.543	ENSKMAG00000013004	-	99	36.543
ENSKMAG00000020455	-	92	34.442	ENSKMAG00000006598	-	99	34.527
ENSKMAG00000020455	-	97	36.761	ENSKMAG00000002601	-	99	36.761
ENSKMAG00000020455	-	66	39.521	ENSKMAG00000014872	-	100	39.521

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020455	-	58	37.382	ENSAPEG00000013789	-	98	37.382	Amphiprion_percula
ENSKMAG00000020455	-	96	36.475	ENSAPEG00000000638	-	80	36.869	Amphiprion_percula
ENSKMAG00000020455	-	86	42.177	ENSDARG00000099418	CABZ01030017.1	99	42.177	Danio_rerio
ENSKMAG00000020455	-	50	33.385	ENSXETG00000034336	-	80	33.385	Xenopus_tropicalis
ENSKMAG00000020455	-	98	30.924	ENSXETG00000030359	-	88	31.397	Xenopus_tropicalis
ENSKMAG00000020455	-	72	33.750	ENSXETG00000033831	-	93	33.750	Xenopus_tropicalis
ENSKMAG00000020455	-	72	33.333	ENSXETG00000031859	-	96	30.959	Xenopus_tropicalis
ENSKMAG00000020455	-	80	34.510	ENSXMAG00000028904	-	97	34.510	Xiphophorus_maculatus