EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000020467 (Gene tree)
Gene ID: 108243785
Gene Symbol: si:dkey-208k4.2
Alias: fi35c12|wu:fi35c12
Full Name: P43 5S RNA-binding protein-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 3933 bases
Position: chrLWHD01000124.1:802329-806261
Accession: 108243785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000027599	zf-C2H2	PF00096.26	8e-25	1	5
ENSKMAP00000027599	zf-C2H2	PF00096.26	8e-25	2	5
ENSKMAP00000027599	zf-C2H2	PF00096.26	8e-25	3	5
ENSKMAP00000027599	zf-C2H2	PF00096.26	8e-25	4	5
ENSKMAP00000027599	zf-C2H2	PF00096.26	8e-25	5	5
ENSKMAP00000027599	zf-met	PF12874.7	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027945	-	2173	XM_017429457	ENSKMAP00000027599	370 (aa)	XP_017284946	UPI0007F8667F

Gene Model

Click here to download ENSKMAG00000020467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000020467	si:dkey-208k4.2	74	31.092	ENSKMAG00000006231	-	76	31.092
ENSKMAG00000020467	si:dkey-208k4.2	74	33.813	ENSKMAG00000011031	-	52	33.333
ENSKMAG00000020467	si:dkey-208k4.2	74	30.233	ENSKMAG00000003766	-	89	30.233
ENSKMAG00000020467	si:dkey-208k4.2	62	31.925	ENSKMAG00000002583	-	87	31.925
ENSKMAG00000020467	si:dkey-208k4.2	85	35.484	ENSKMAG00000021817	znf236	53	35.484
ENSKMAG00000020467	si:dkey-208k4.2	63	30.709	ENSKMAG00000001357	-	59	30.709
ENSKMAG00000020467	si:dkey-208k4.2	72	31.008	ENSKMAG00000018648	-	55	31.008
ENSKMAG00000020467	si:dkey-208k4.2	72	34.444	ENSKMAG00000013863	-	56	34.444
ENSKMAG00000020467	si:dkey-208k4.2	72	30.189	ENSKMAG00000018636	-	72	30.189
ENSKMAG00000020467	si:dkey-208k4.2	59	31.527	ENSKMAG00000000668	-	72	31.527
ENSKMAG00000020467	si:dkey-208k4.2	63	30.921	ENSKMAG00000010903	-	55	30.921
ENSKMAG00000020467	si:dkey-208k4.2	72	40.000	ENSKMAG00000005747	-	74	40.000
ENSKMAG00000020467	si:dkey-208k4.2	72	36.275	ENSKMAG00000000462	-	86	36.275
ENSKMAG00000020467	si:dkey-208k4.2	69	31.500	ENSKMAG00000008316	-	78	31.500
ENSKMAG00000020467	si:dkey-208k4.2	71	30.566	ENSKMAG00000013843	-	62	30.566
ENSKMAG00000020467	si:dkey-208k4.2	75	33.645	ENSKMAG00000006773	-	76	33.645
ENSKMAG00000020467	si:dkey-208k4.2	52	30.151	ENSKMAG00000018656	si:dkey-77f5.14	92	30.151
ENSKMAG00000020467	si:dkey-208k4.2	85	30.000	ENSKMAG00000000073	-	76	30.000
ENSKMAG00000020467	si:dkey-208k4.2	73	33.553	ENSKMAG00000000802	-	77	33.553
ENSKMAG00000020467	si:dkey-208k4.2	72	32.836	ENSKMAG00000015304	-	60	32.836
ENSKMAG00000020467	si:dkey-208k4.2	85	35.681	ENSKMAG00000000543	-	94	32.453
ENSKMAG00000020467	si:dkey-208k4.2	82	30.882	ENSKMAG00000021874	-	86	30.882
ENSKMAG00000020467	si:dkey-208k4.2	72	36.066	ENSKMAG00000008319	-	71	36.066
ENSKMAG00000020467	si:dkey-208k4.2	89	31.224	ENSKMAG00000019130	-	77	31.224
ENSKMAG00000020467	si:dkey-208k4.2	72	31.325	ENSKMAG00000020025	-	84	31.325
ENSKMAG00000020467	si:dkey-208k4.2	84	30.182	ENSKMAG00000000597	-	95	30.182
ENSKMAG00000020467	si:dkey-208k4.2	74	30.258	ENSKMAG00000012202	-	73	30.258
ENSKMAG00000020467	si:dkey-208k4.2	72	30.851	ENSKMAG00000001996	-	93	30.851

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020467	si:dkey-208k4.2	99	74.860	ENSPREG00000010813	si:dkey-208k4.2	97	74.860	Poecilia_reticulata
ENSKMAG00000020467	si:dkey-208k4.2	96	70.787	ENSXCOG00000016471	si:dkey-208k4.2	96	72.391	Xiphophorus_couchianus