EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000020486 (Gene tree)
Gene ID: 108233477
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5031 bases
Position: chrLWHD01000021.1:3432809-3437839
Accession: 108233477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000027625	RRM_1	PF00076.22	4.7e-32	1	2
ENSKMAP00000027625	RRM_1	PF00076.22	4.7e-32	2	2
ENSKMAP00000027638	RRM_1	PF00076.22	7.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027971	-	1044	XM_017411996	ENSKMAP00000027625	299 (aa)	XP_017267485	UPI0007F914CB
ENSKMAT00000027984	-	829	-	ENSKMAP00000027638	150 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000020486's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG
kmr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000020486	srsf5b	90	64.286	ENSKMAG00000014937	srsf5a	90	53.220
ENSKMAG00000020486	srsf5b	83	57.258	ENSKMAG00000011934	srsf6a	57	62.360
ENSKMAG00000020486	srsf5b	83	62.400	ENSKMAG00000013631	srsf4	79	54.854
ENSKMAG00000020486	srsf5b	82	45.312	ENSKMAG00000019232	srsf1a	65	46.471
ENSKMAG00000020486	srsf5b	84	37.405	ENSKMAG00000007113	srsf9	68	43.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020486	srsf5b	87	78.788	ENSG00000100650	SRSF5	100	79.231	Homo_sapiens
ENSKMAG00000020486	srsf5b	89	94.052	ENSAPOG00000008642	srsf5b	92	94.424	Acanthochromis_polyacanthus
ENSKMAG00000020486	srsf5b	84	79.528	ENSAMEG00000014574	SRSF5	67	82.888	Ailuropoda_melanoleuca
ENSKMAG00000020486	srsf5b	100	90.066	ENSACIG00000010742	srsf5b	92	93.704	Amphilophus_citrinellus
ENSKMAG00000020486	srsf5b	89	93.680	ENSAOCG00000005719	srsf5b	92	94.052	Amphiprion_ocellaris
ENSKMAG00000020486	srsf5b	89	93.680	ENSAPEG00000007830	srsf5b	92	94.052	Amphiprion_percula
ENSKMAG00000020486	srsf5b	89	92.193	ENSATEG00000019112	srsf5b	92	92.565	Anabas_testudineus
ENSKMAG00000020486	srsf5b	81	74.590	ENSAPLG00000014681	SRSF5	69	79.032	Anas_platyrhynchos
ENSKMAG00000020486	srsf5b	84	82.540	ENSACAG00000005143	SRSF5	99	62.333	Anolis_carolinensis
ENSKMAG00000020486	srsf5b	86	76.154	ENSANAG00000037529	-	96	76.923	Aotus_nancymaae
ENSKMAG00000020486	srsf5b	87	78.788	ENSANAG00000027977	-	92	79.545	Aotus_nancymaae
ENSKMAG00000020486	srsf5b	100	90.033	ENSACLG00000026424	srsf5b	92	93.680	Astatotilapia_calliptera
ENSKMAG00000020486	srsf5b	100	90.000	ENSAMXG00000011932	srsf5b	100	90.000	Astyanax_mexicanus
ENSKMAG00000020486	srsf5b	84	79.528	ENSBTAG00000011596	SRSF5	67	82.888	Bos_taurus
ENSKMAG00000020486	srsf5b	87	78.788	ENSCJAG00000014884	SRSF5	92	79.545	Callithrix_jacchus
ENSKMAG00000020486	srsf5b	84	79.528	ENSCAFG00000016589	SRSF5	67	82.888	Canis_familiaris
ENSKMAG00000020486	srsf5b	84	79.528	ENSCAFG00020005661	SRSF5	67	82.888	Canis_lupus_dingo
ENSKMAG00000020486	srsf5b	84	78.740	ENSCHIG00000016794	SRSF5	66	82.888	Capra_hircus
ENSKMAG00000020486	srsf5b	87	78.030	ENSTSYG00000007786	SRSF5	92	78.788	Carlito_syrichta
ENSKMAG00000020486	srsf5b	85	77.519	ENSCAPG00000008801	SRSF5	66	82.888	Cavia_aperea
ENSKMAG00000020486	srsf5b	85	77.519	ENSCPOG00000039926	SRSF5	92	71.429	Cavia_porcellus
ENSKMAG00000020486	srsf5b	87	78.788	ENSCCAG00000029002	SRSF5	92	79.545	Cebus_capucinus
ENSKMAG00000020486	srsf5b	87	78.788	ENSCATG00000045051	SRSF5	92	79.545	Cercocebus_atys
ENSKMAG00000020486	srsf5b	84	79.528	ENSCLAG00000004755	SRSF5	67	82.888	Chinchilla_lanigera
ENSKMAG00000020486	srsf5b	84	79.528	ENSCSAG00000013041	SRSF5	67	82.888	Chlorocebus_sabaeus
ENSKMAG00000020486	srsf5b	84	78.740	ENSCPBG00000021653	SRSF5	68	83.422	Chrysemys_picta_bellii
ENSKMAG00000020486	srsf5b	87	78.788	ENSCANG00000030560	SRSF5	92	79.545	Colobus_angolensis_palliatus
ENSKMAG00000020486	srsf5b	84	79.528	ENSCGRG00001015339	Srsf5	93	66.160	Cricetulus_griseus_chok1gshd
ENSKMAG00000020486	srsf5b	84	79.528	ENSCGRG00000009833	Srsf5	93	72.243	Cricetulus_griseus_crigri
ENSKMAG00000020486	srsf5b	84	95.385	ENSCSEG00000003801	srsf5b	91	89.139	Cynoglossus_semilaevis
ENSKMAG00000020486	srsf5b	84	96.875	ENSCVAG00000017240	srsf5b	88	88.850	Cyprinodon_variegatus
ENSKMAG00000020486	srsf5b	97	91.034	ENSDARG00000027734	srsf5b	90	95.238	Danio_rerio
ENSKMAG00000020486	srsf5b	84	78.740	ENSDNOG00000006160	SRSF5	68	82.888	Dasypus_novemcinctus
ENSKMAG00000020486	srsf5b	84	79.528	ENSDORG00000003989	Srsf5	96	63.929	Dipodomys_ordii
ENSKMAG00000020486	srsf5b	84	71.429	ENSETEG00000020396	SRSF5	99	65.232	Echinops_telfairi
ENSKMAG00000020486	srsf5b	84	59.843	ENSEBUG00000006229	srsf5b	69	63.978	Eptatretus_burgeri
ENSKMAG00000020486	srsf5b	84	79.528	ENSEASG00005016615	SRSF5	67	82.888	Equus_asinus_asinus
ENSKMAG00000020486	srsf5b	87	78.030	ENSECAG00000026873	SRSF5	92	78.788	Equus_caballus
ENSKMAG00000020486	srsf5b	100	79.882	ENSELUG00000019852	srsf5b	100	81.657	Esox_lucius
ENSKMAG00000020486	srsf5b	87	78.030	ENSFCAG00000008848	SRSF5	92	78.788	Felis_catus
ENSKMAG00000020486	srsf5b	84	76.984	ENSFALG00000004979	SRSF5	68	82.888	Ficedula_albicollis
ENSKMAG00000020486	srsf5b	84	79.528	ENSFDAG00000011562	SRSF5	68	82.888	Fukomys_damarensis
ENSKMAG00000020486	srsf5b	90	94.139	ENSFHEG00000009476	srsf5b	88	94.465	Fundulus_heteroclitus
ENSKMAG00000020486	srsf5b	84	85.294	ENSGMOG00000000595	srsf5b	99	76.991	Gadus_morhua
ENSKMAG00000020486	srsf5b	87	74.809	ENSGALG00000009421	SRSF5	92	77.273	Gallus_gallus
ENSKMAG00000020486	srsf5b	89	95.167	ENSGAFG00000002865	srsf5b	89	95.539	Gambusia_affinis
ENSKMAG00000020486	srsf5b	100	83.750	ENSGACG00000007834	srsf5b	100	86.250	Gasterosteus_aculeatus
ENSKMAG00000020486	srsf5b	84	78.740	ENSGAGG00000004447	SRSF5	68	83.422	Gopherus_agassizii
ENSKMAG00000020486	srsf5b	87	78.788	ENSGGOG00000016462	SRSF5	92	79.545	Gorilla_gorilla
ENSKMAG00000020486	srsf5b	100	89.701	ENSHBUG00000012462	srsf5b	93	97.656	Haplochromis_burtoni
ENSKMAG00000020486	srsf5b	84	78.740	ENSHGLG00000010147	SRSF5	67	82.353	Heterocephalus_glaber_female
ENSKMAG00000020486	srsf5b	78	51.282	ENSHGLG00100000095	-	62	60.112	Heterocephalus_glaber_male
ENSKMAG00000020486	srsf5b	84	78.740	ENSHGLG00100015328	SRSF5	67	82.353	Heterocephalus_glaber_male
ENSKMAG00000020486	srsf5b	84	84.091	ENSHCOG00000005592	srsf5b	92	78.022	Hippocampus_comes
ENSKMAG00000020486	srsf5b	84	79.528	ENSSTOG00000020672	SRSF5	67	82.888	Ictidomys_tridecemlineatus
ENSKMAG00000020486	srsf5b	84	79.528	ENSJJAG00000001688	Srsf5	67	82.888	Jaculus_jaculus
ENSKMAG00000020486	srsf5b	89	91.144	ENSLBEG00000013647	srsf5b	92	91.513	Labrus_bergylta
ENSKMAG00000020486	srsf5b	84	82.677	ENSLACG00000005874	SRSF5	68	85.561	Latimeria_chalumnae
ENSKMAG00000020486	srsf5b	84	84.375	ENSLOCG00000012438	srsf5b	70	83.333	Lepisosteus_oculatus
ENSKMAG00000020486	srsf5b	84	78.740	ENSLAFG00000005260	SRSF5	67	82.353	Loxodonta_africana
ENSKMAG00000020486	srsf5b	87	78.788	ENSMFAG00000002393	SRSF5	92	79.545	Macaca_fascicularis
ENSKMAG00000020486	srsf5b	87	78.788	ENSMNEG00000030872	SRSF5	92	79.545	Macaca_nemestrina
ENSKMAG00000020486	srsf5b	87	78.788	ENSMLEG00000030017	SRSF5	92	79.545	Mandrillus_leucophaeus
ENSKMAG00000020486	srsf5b	84	97.656	ENSMAMG00000002673	srsf5b	92	92.937	Mastacembelus_armatus
ENSKMAG00000020486	srsf5b	100	90.033	ENSMZEG00005003550	srsf5b	92	93.680	Maylandia_zebra
ENSKMAG00000020486	srsf5b	58	59.770	ENSMGAG00000011835	SRSF5	99	54.135	Meleagris_gallopavo
ENSKMAG00000020486	srsf5b	84	79.528	ENSMAUG00000009544	Srsf5	93	72.243	Mesocricetus_auratus
ENSKMAG00000020486	srsf5b	87	78.030	ENSMICG00000037432	-	92	78.788	Microcebus_murinus
ENSKMAG00000020486	srsf5b	84	79.528	ENSMOCG00000013134	Srsf5	96	68.440	Microtus_ochrogaster
ENSKMAG00000020486	srsf5b	95	88.889	ENSMMOG00000000137	srsf5b	80	96.154	Mola_mola
ENSKMAG00000020486	srsf5b	84	78.740	ENSMODG00000011362	SRSF5	68	83.422	Monodelphis_domestica
ENSKMAG00000020486	srsf5b	100	96.732	ENSMALG00000021875	srsf5b	100	96.732	Monopterus_albus
ENSKMAG00000020486	srsf5b	84	79.528	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSKMAG00000020486	srsf5b	84	79.528	MGP_PahariEiJ_G0029659	Srsf5	93	72.243	Mus_pahari
ENSKMAG00000020486	srsf5b	84	79.528	ENSMPUG00000007458	SRSF5	67	82.888	Mustela_putorius_furo
ENSKMAG00000020486	srsf5b	85	77.519	ENSMLUG00000011939	SRSF5	92	65.152	Myotis_lucifugus
ENSKMAG00000020486	srsf5b	84	79.528	ENSNGAG00000010073	-	67	82.888	Nannospalax_galili
ENSKMAG00000020486	srsf5b	100	86.139	ENSNBRG00000001285	srsf5b	92	91.882	Neolamprologus_brichardi
ENSKMAG00000020486	srsf5b	87	78.788	ENSNLEG00000001615	SRSF5	92	79.545	Nomascus_leucogenys
ENSKMAG00000020486	srsf5b	85	77.519	ENSOPRG00000008286	SRSF5	65	82.888	Ochotona_princeps
ENSKMAG00000020486	srsf5b	85	75.969	ENSODEG00000000700	-	69	80.749	Octodon_degus
ENSKMAG00000020486	srsf5b	85	77.519	ENSODEG00000013469	-	68	82.888	Octodon_degus
ENSKMAG00000020486	srsf5b	100	90.033	ENSONIG00000005759	srsf5b	92	93.680	Oreochromis_niloticus
ENSKMAG00000020486	srsf5b	84	72.441	ENSOANG00000013336	SRSF5	68	79.144	Ornithorhynchus_anatinus
ENSKMAG00000020486	srsf5b	85	77.519	ENSOCUG00000009274	SRSF5	66	82.888	Oryctolagus_cuniculus
ENSKMAG00000020486	srsf5b	84	88.462	ENSORLG00000029854	srsf5b	92	80.405	Oryzias_latipes
ENSKMAG00000020486	srsf5b	89	90.775	ENSORLG00015001720	srsf5b	92	91.144	Oryzias_latipes_hsok
ENSKMAG00000020486	srsf5b	90	89.781	ENSOMEG00000020690	srsf5b	67	89.668	Oryzias_melastigma
ENSKMAG00000020486	srsf5b	84	78.740	ENSOGAG00000015122	SRSF5	67	82.888	Otolemur_garnettii
ENSKMAG00000020486	srsf5b	87	78.788	ENSPPAG00000029921	SRSF5	92	79.545	Pan_paniscus
ENSKMAG00000020486	srsf5b	87	78.030	ENSPPRG00000012903	SRSF5	92	78.788	Panthera_pardus
ENSKMAG00000020486	srsf5b	87	78.030	ENSPTIG00000018589	SRSF5	92	78.788	Panthera_tigris_altaica
ENSKMAG00000020486	srsf5b	87	78.788	ENSPTRG00000006488	SRSF5	92	79.545	Pan_troglodytes
ENSKMAG00000020486	srsf5b	87	78.788	ENSPANG00000021091	SRSF5	92	79.545	Papio_anubis
ENSKMAG00000020486	srsf5b	84	78.740	ENSPSIG00000012522	SRSF5	69	83.422	Pelodiscus_sinensis
ENSKMAG00000020486	srsf5b	86	95.385	ENSPMGG00000021646	srsf5b	95	93.284	Periophthalmus_magnuspinnatus
ENSKMAG00000020486	srsf5b	84	79.528	ENSPEMG00000020173	Srsf5	93	66.160	Peromyscus_maniculatus_bairdii
ENSKMAG00000020486	srsf5b	84	56.204	ENSPMAG00000007790	srsf5b	68	61.929	Petromyzon_marinus
ENSKMAG00000020486	srsf5b	84	78.740	ENSPCIG00000011877	SRSF5	68	83.422	Phascolarctos_cinereus
ENSKMAG00000020486	srsf5b	89	95.167	ENSPFOG00000017700	srsf5b	89	95.539	Poecilia_formosa
ENSKMAG00000020486	srsf5b	89	94.815	ENSPLAG00000006480	srsf5b	89	95.185	Poecilia_latipinna
ENSKMAG00000020486	srsf5b	100	95.395	ENSPMEG00000012751	srsf5b	100	95.395	Poecilia_mexicana
ENSKMAG00000020486	srsf5b	89	95.167	ENSPREG00000010381	srsf5b	89	95.539	Poecilia_reticulata
ENSKMAG00000020486	srsf5b	84	79.528	ENSPPYG00000005945	SRSF5	67	82.888	Pongo_abelii
ENSKMAG00000020486	srsf5b	85	76.744	ENSPCAG00000004405	SRSF5	100	82.119	Procavia_capensis
ENSKMAG00000020486	srsf5b	87	78.030	ENSPCOG00000014442	SRSF5	92	78.788	Propithecus_coquereli
ENSKMAG00000020486	srsf5b	100	82.060	ENSPNYG00000002669	srsf5b	94	97.656	Pundamilia_nyererei
ENSKMAG00000020486	srsf5b	100	89.333	ENSPNAG00000011262	srsf5b	100	89.333	Pygocentrus_nattereri
ENSKMAG00000020486	srsf5b	84	79.528	ENSRNOG00000005513	Srsf5	93	66.160	Rattus_norvegicus
ENSKMAG00000020486	srsf5b	87	78.788	ENSRBIG00000013003	SRSF5	92	79.545	Rhinopithecus_bieti
ENSKMAG00000020486	srsf5b	87	78.788	ENSRROG00000043407	SRSF5	92	79.545	Rhinopithecus_roxellana
ENSKMAG00000020486	srsf5b	87	78.788	ENSSBOG00000030784	SRSF5	92	79.545	Saimiri_boliviensis_boliviensis
ENSKMAG00000020486	srsf5b	84	78.740	ENSSHAG00000002871	SRSF5	68	83.422	Sarcophilus_harrisii
ENSKMAG00000020486	srsf5b	84	88.652	ENSSMAG00000019728	srsf5b	91	81.544	Scophthalmus_maximus
ENSKMAG00000020486	srsf5b	84	97.656	ENSSDUG00000005766	srsf5b	92	93.870	Seriola_dumerili
ENSKMAG00000020486	srsf5b	100	97.368	ENSSLDG00000023255	srsf5b	100	97.368	Seriola_lalandi_dorsalis
ENSKMAG00000020486	srsf5b	61	72.678	ENSSARG00000001059	SRSF5	96	63.004	Sorex_araneus
ENSKMAG00000020486	srsf5b	87	72.993	ENSSPUG00000002464	SRSF5	93	74.453	Sphenodon_punctatus
ENSKMAG00000020486	srsf5b	89	93.309	ENSSPAG00000015325	srsf5b	92	93.680	Stegastes_partitus
ENSKMAG00000020486	srsf5b	84	79.528	ENSSSCG00000032583	SRSF5	67	82.888	Sus_scrofa
ENSKMAG00000020486	srsf5b	85	74.219	ENSTGUG00000011425	SRSF5	88	63.838	Taeniopygia_guttata
ENSKMAG00000020486	srsf5b	84	87.402	ENSTRUG00000017811	srsf5b	95	77.517	Takifugu_rubripes
ENSKMAG00000020486	srsf5b	91	81.752	ENSTNIG00000016411	srsf5b	95	85.448	Tetraodon_nigroviridis
ENSKMAG00000020486	srsf5b	84	79.528	ENSTBEG00000001972	SRSF5	99	63.333	Tupaia_belangeri
ENSKMAG00000020486	srsf5b	83	78.571	ENSTTRG00000003318	SRSF5	66	82.796	Tursiops_truncatus
ENSKMAG00000020486	srsf5b	84	79.528	ENSUAMG00000014184	SRSF5	67	82.888	Ursus_americanus
ENSKMAG00000020486	srsf5b	84	79.528	ENSUMAG00000009827	SRSF5	67	82.888	Ursus_maritimus
ENSKMAG00000020486	srsf5b	84	79.528	ENSVPAG00000006448	SRSF5	67	82.888	Vicugna_pacos
ENSKMAG00000020486	srsf5b	84	79.528	ENSVVUG00000003790	SRSF5	67	82.888	Vulpes_vulpes
ENSKMAG00000020486	srsf5b	84	79.688	ENSXETG00000002211	srsf5	68	82.447	Xenopus_tropicalis
ENSKMAG00000020486	srsf5b	84	96.899	ENSXCOG00000001570	srsf5b	89	91.852	Xiphophorus_couchianus
ENSKMAG00000020486	srsf5b	100	94.771	ENSXMAG00000026416	srsf5b	100	94.771	Xiphophorus_maculatus