EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000020760 (Gene tree)
Gene ID: 108244367
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG-binding domain protein 1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 18088 bases
Position: chrLWHD01000140.1:570611-588698
Accession: 108244367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000027985	MBD	PF01429.19	3.1e-13	1	1
ENSKMAP00000027972	MBD	PF01429.19	3.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000028326	-	4039	XM_017430509	ENSKMAP00000027972	820 (aa)	XP_017285998	UPI0007F8C46E
ENSKMAT00000028338	-	3958	XM_017430510	ENSKMAP00000027985	793 (aa)	XP_017285999	UPI0007F86B9D

Gene Model

Click here to download ENSKMAG00000020760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020760's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020760	mbd1b	50	30.348	ENSG00000141644	MBD1	75	57.576	Homo_sapiens
ENSKMAG00000020760	mbd1b	99	66.466	ENSAPOG00000012810	mbd1b	99	66.226	Acanthochromis_polyacanthus
ENSKMAG00000020760	mbd1b	91	73.684	ENSACIG00000010590	mbd1b	84	73.684	Amphilophus_citrinellus
ENSKMAG00000020760	mbd1b	99	66.907	ENSAOCG00000020272	mbd1b	99	66.546	Amphiprion_ocellaris
ENSKMAG00000020760	mbd1b	99	66.707	ENSAPEG00000023230	mbd1b	99	66.346	Amphiprion_percula
ENSKMAG00000020760	mbd1b	99	65.444	ENSATEG00000009608	mbd1b	100	65.917	Anabas_testudineus
ENSKMAG00000020760	mbd1b	50	34.463	ENSANAG00000036253	MBD1	67	32.227	Aotus_nancymaae
ENSKMAG00000020760	mbd1b	97	65.767	ENSACLG00000021383	mbd1b	96	64.994	Astatotilapia_calliptera
ENSKMAG00000020760	mbd1b	61	32.218	ENSBTAG00000003801	MBD1	73	32.301	Bos_taurus
ENSKMAG00000020760	mbd1b	50	31.172	ENSCJAG00000004959	MBD1	74	32.093	Callithrix_jacchus
ENSKMAG00000020760	mbd1b	58	30.526	ENSCPOG00000001671	MBD1	64	30.657	Cavia_porcellus
ENSKMAG00000020760	mbd1b	50	35.028	ENSCCAG00000034600	MBD1	74	34.123	Cebus_capucinus
ENSKMAG00000020760	mbd1b	99	56.019	ENSCSEG00000009082	mbd1b	99	55.440	Cynoglossus_semilaevis
ENSKMAG00000020760	mbd1b	99	67.266	ENSCVAG00000001167	mbd1b	99	67.506	Cyprinodon_variegatus
ENSKMAG00000020760	mbd1b	92	35.956	ENSDARG00000025699	mbd1b	89	35.241	Danio_rerio
ENSKMAG00000020760	mbd1b	54	34.928	ENSEASG00005003857	MBD1	69	33.184	Equus_asinus_asinus
ENSKMAG00000020760	mbd1b	54	33.491	ENSECAG00000011497	MBD1	55	33.184	Equus_caballus
ENSKMAG00000020760	mbd1b	81	57.692	ENSELUG00000004375	mbd1b	86	44.600	Esox_lucius
ENSKMAG00000020760	mbd1b	54	31.207	ENSFCAG00000015730	MBD1	66	30.485	Felis_catus
ENSKMAG00000020760	mbd1b	99	67.067	ENSFHEG00000020120	mbd1b	99	66.747	Fundulus_heteroclitus
ENSKMAG00000020760	mbd1b	100	69.788	ENSGAFG00000008975	mbd1b	99	69.701	Gambusia_affinis
ENSKMAG00000020760	mbd1b	80	50.957	ENSGACG00000012106	-	98	78.082	Gasterosteus_aculeatus
ENSKMAG00000020760	mbd1b	97	65.890	ENSHBUG00000014270	mbd1b	96	65.361	Haplochromis_burtoni
ENSKMAG00000020760	mbd1b	98	54.410	ENSHCOG00000009952	mbd1b	99	53.913	Hippocampus_comes
ENSKMAG00000020760	mbd1b	90	36.445	ENSIPUG00000015243	-	90	36.242	Ictalurus_punctatus
ENSKMAG00000020760	mbd1b	70	68.013	ENSMAMG00000023341	-	94	62.992	Mastacembelus_armatus
ENSKMAG00000020760	mbd1b	97	65.890	ENSMZEG00005010421	mbd1b	96	65.116	Maylandia_zebra
ENSKMAG00000020760	mbd1b	88	76.923	ENSMMOG00000011607	mbd1b	88	90.000	Mola_mola
ENSKMAG00000020760	mbd1b	51	44.444	ENSMODG00000001286	-	75	42.353	Monodelphis_domestica
ENSKMAG00000020760	mbd1b	98	65.780	ENSMALG00000007808	mbd1b	98	64.294	Monopterus_albus
ENSKMAG00000020760	mbd1b	99	64.235	ENSONIG00000020289	mbd1b	96	65.037	Oreochromis_niloticus
ENSKMAG00000020760	mbd1b	99	63.679	ENSORLG00000029390	mbd1b	99	63.604	Oryzias_latipes
ENSKMAG00000020760	mbd1b	99	63.797	ENSORLG00020000575	mbd1b	99	63.604	Oryzias_latipes_hni
ENSKMAG00000020760	mbd1b	99	63.840	ENSORLG00015014812	mbd1b	99	63.647	Oryzias_latipes_hsok
ENSKMAG00000020760	mbd1b	99	62.864	ENSOMEG00000023660	mbd1b	99	63.213	Oryzias_melastigma
ENSKMAG00000020760	mbd1b	54	31.207	ENSPPRG00000021387	MBD1	66	30.485	Panthera_pardus
ENSKMAG00000020760	mbd1b	51	52.308	ENSPCIG00000027937	-	56	52.308	Phascolarctos_cinereus
ENSKMAG00000020760	mbd1b	100	70.062	ENSPFOG00000007511	mbd1b	99	69.880	Poecilia_formosa
ENSKMAG00000020760	mbd1b	100	70.486	ENSPLAG00000021258	mbd1b	99	70.149	Poecilia_latipinna
ENSKMAG00000020760	mbd1b	100	70.237	ENSPMEG00000024145	mbd1b	99	69.900	Poecilia_mexicana
ENSKMAG00000020760	mbd1b	100	70.647	ENSPREG00000021805	mbd1b	99	70.186	Poecilia_reticulata
ENSKMAG00000020760	mbd1b	92	38.025	ENSPNAG00000018075	mbd1b	99	36.042	Pygocentrus_nattereri
ENSKMAG00000020760	mbd1b	50	30.100	ENSRROG00000032517	MBD1	78	35.071	Rhinopithecus_roxellana
ENSKMAG00000020760	mbd1b	50	30.392	ENSSBOG00000027169	MBD1	74	33.803	Saimiri_boliviensis_boliviensis
ENSKMAG00000020760	mbd1b	59	45.455	ENSSFOG00015008591	-	60	54.000	Scleropages_formosus
ENSKMAG00000020760	mbd1b	94	64.808	ENSSMAG00000014640	mbd1b	79	67.647	Scophthalmus_maximus
ENSKMAG00000020760	mbd1b	91	70.558	ENSSDUG00000012996	mbd1b	94	65.677	Seriola_dumerili
ENSKMAG00000020760	mbd1b	87	57.588	ENSSLDG00000012422	mbd1b	100	58.004	Seriola_lalandi_dorsalis
ENSKMAG00000020760	mbd1b	99	68.275	ENSSPAG00000021447	mbd1b	99	67.028	Stegastes_partitus
ENSKMAG00000020760	mbd1b	51	30.485	ENSSSCG00000004516	MBD1	64	31.034	Sus_scrofa
ENSKMAG00000020760	mbd1b	98	59.976	ENSTRUG00000013422	mbd1b	99	59.732	Takifugu_rubripes
ENSKMAG00000020760	mbd1b	62	64.122	ENSTNIG00000007326	-	69	69.231	Tetraodon_nigroviridis
ENSKMAG00000020760	mbd1b	54	30.856	ENSUMAG00000002947	MBD1	68	30.090	Ursus_maritimus
ENSKMAG00000020760	mbd1b	100	69.307	ENSXMAG00000005628	mbd1b	99	69.098	Xiphophorus_maculatus