EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000020768 (Gene tree)
Gene ID: 108240943
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 20944 bases
Position: chrLWHD01000080.1:1536717-1557660
Accession: 108240943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000028011	GTP_EFTU	PF00009.27	7.2e-61	1	1
ENSKMAP00000028031	GTP_EFTU	PF00009.27	8.7e-61	1	1
ENSKMAP00000028011	GTP_EFTU_D2	PF03144.25	1.2e-16	1	1
ENSKMAP00000028031	GTP_EFTU_D2	PF03144.25	1.4e-16	1	1
ENSKMAP00000028011	EFG_IV	PF03764.18	1.5e-37	1	1
ENSKMAP00000028031	EFG_IV	PF03764.18	1.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000028364	-	7036	XM_017424756	ENSKMAP00000028011	748 (aa)	XP_017280245	UPI0007F90584
ENSKMAT00000028385	-	2415	-	ENSKMAP00000028031	804 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000020768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000020768	gfm1	76	38.255	ENSKMAG00000006881	eef2b	75	38.255
ENSKMAG00000020768	gfm1	94	34.079	ENSKMAG00000013277	gfm2	95	34.474
ENSKMAG00000020768	gfm1	73	38.000	ENSKMAG00000003647	-	72	38.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000020768	gfm1	98	78.367	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSKMAG00000020768	gfm1	92	86.628	ENSAPOG00000016489	gfm1	98	86.628	Acanthochromis_polyacanthus
ENSKMAG00000020768	gfm1	96	80.223	ENSAMEG00000013542	GFM1	98	78.649	Ailuropoda_melanoleuca
ENSKMAG00000020768	gfm1	97	82.759	ENSACIG00000014465	gfm1	94	82.759	Amphilophus_citrinellus
ENSKMAG00000020768	gfm1	100	86.765	ENSAOCG00000006023	gfm1	100	86.765	Amphiprion_ocellaris
ENSKMAG00000020768	gfm1	100	86.631	ENSAPEG00000024499	gfm1	100	86.631	Amphiprion_percula
ENSKMAG00000020768	gfm1	100	86.898	ENSATEG00000013789	gfm1	100	86.898	Anabas_testudineus
ENSKMAG00000020768	gfm1	97	80.000	ENSAPLG00000005022	GFM1	100	80.000	Anas_platyrhynchos
ENSKMAG00000020768	gfm1	97	79.172	ENSACAG00000006829	GFM1	98	79.391	Anolis_carolinensis
ENSKMAG00000020768	gfm1	100	76.831	ENSANAG00000035983	GFM1	100	76.831	Aotus_nancymaae
ENSKMAG00000020768	gfm1	100	87.834	ENSACLG00000016586	gfm1	100	87.834	Astatotilapia_calliptera
ENSKMAG00000020768	gfm1	100	82.219	ENSAMXG00000013435	gfm1	98	82.900	Astyanax_mexicanus
ENSKMAG00000020768	gfm1	96	79.944	ENSBTAG00000027795	GFM1	95	79.944	Bos_taurus
ENSKMAG00000020768	gfm1	93	58.960	WBGene00009246	gfm-1	92	58.960	Caenorhabditis_elegans
ENSKMAG00000020768	gfm1	97	79.063	ENSCJAG00000000363	GFM1	97	79.063	Callithrix_jacchus
ENSKMAG00000020768	gfm1	98	79.155	ENSCAFG00000009006	GFM1	100	80.030	Canis_familiaris
ENSKMAG00000020768	gfm1	98	79.048	ENSCAFG00020005878	GFM1	98	80.501	Canis_lupus_dingo
ENSKMAG00000020768	gfm1	96	79.805	ENSCHIG00000015220	GFM1	95	79.805	Capra_hircus
ENSKMAG00000020768	gfm1	100	77.689	ENSTSYG00000002013	GFM1	100	77.689	Carlito_syrichta
ENSKMAG00000020768	gfm1	96	69.890	ENSCAPG00000005699	GFM1	97	69.890	Cavia_aperea
ENSKMAG00000020768	gfm1	100	77.321	ENSCPOG00000001194	GFM1	100	77.321	Cavia_porcellus
ENSKMAG00000020768	gfm1	100	76.698	ENSCCAG00000025561	GFM1	100	76.698	Cebus_capucinus
ENSKMAG00000020768	gfm1	100	76.831	ENSCATG00000037622	GFM1	100	76.831	Cercocebus_atys
ENSKMAG00000020768	gfm1	97	78.788	ENSCLAG00000002503	GFM1	97	78.689	Chinchilla_lanigera
ENSKMAG00000020768	gfm1	100	77.097	ENSCSAG00000012162	GFM1	100	77.097	Chlorocebus_sabaeus
ENSKMAG00000020768	gfm1	100	69.098	ENSCHOG00000004867	GFM1	100	69.098	Choloepus_hoffmanni
ENSKMAG00000020768	gfm1	100	79.278	ENSCPBG00000018367	GFM1	97	81.440	Chrysemys_picta_bellii
ENSKMAG00000020768	gfm1	94	58.659	ENSCING00000011960	-	93	58.659	Ciona_intestinalis
ENSKMAG00000020768	gfm1	94	60.198	ENSCSAVG00000008514	-	100	58.159	Ciona_savignyi
ENSKMAG00000020768	gfm1	98	77.959	ENSCANG00000031714	GFM1	100	76.831	Colobus_angolensis_palliatus
ENSKMAG00000020768	gfm1	100	77.497	ENSCGRG00001022095	GFM1	100	77.497	Cricetulus_griseus_chok1gshd
ENSKMAG00000020768	gfm1	100	77.497	ENSCGRG00000012043	GFM1	100	77.497	Cricetulus_griseus_crigri
ENSKMAG00000020768	gfm1	97	81.051	ENSCSEG00000017088	gfm1	99	81.051	Cynoglossus_semilaevis
ENSKMAG00000020768	gfm1	100	89.572	ENSCVAG00000004126	gfm1	100	89.572	Cyprinodon_variegatus
ENSKMAG00000020768	gfm1	100	81.417	ENSDARG00000063624	gfm1	100	81.417	Danio_rerio
ENSKMAG00000020768	gfm1	55	77.262	ENSDNOG00000016385	-	100	77.262	Dasypus_novemcinctus
ENSKMAG00000020768	gfm1	99	76.819	ENSDORG00000014165	Gfm1	98	76.819	Dipodomys_ordii
ENSKMAG00000020768	gfm1	95	68.688	FBgn0263133	mEFG1	95	68.688	Drosophila_melanogaster
ENSKMAG00000020768	gfm1	96	71.706	ENSETEG00000019197	GFM1	95	71.706	Echinops_telfairi
ENSKMAG00000020768	gfm1	90	63.056	ENSEBUG00000012794	gfm1	99	63.056	Eptatretus_burgeri
ENSKMAG00000020768	gfm1	96	59.444	ENSEEUG00000000429	GFM1	99	59.583	Erinaceus_europaeus
ENSKMAG00000020768	gfm1	100	83.690	ENSELUG00000014728	gfm1	100	83.690	Esox_lucius
ENSKMAG00000020768	gfm1	97	79.890	ENSFCAG00000013291	GFM1	100	77.984	Felis_catus
ENSKMAG00000020768	gfm1	90	79.556	ENSFALG00000007619	GFM1	100	79.556	Ficedula_albicollis
ENSKMAG00000020768	gfm1	100	76.923	ENSFDAG00000016559	GFM1	100	76.923	Fukomys_damarensis
ENSKMAG00000020768	gfm1	100	89.439	ENSFHEG00000006091	gfm1	100	89.439	Fundulus_heteroclitus
ENSKMAG00000020768	gfm1	97	84.319	ENSGMOG00000010161	gfm1	100	84.319	Gadus_morhua
ENSKMAG00000020768	gfm1	97	80.138	ENSGALG00000009634	GFM1	98	80.471	Gallus_gallus
ENSKMAG00000020768	gfm1	100	88.770	ENSGAFG00000012527	gfm1	100	88.770	Gambusia_affinis
ENSKMAG00000020768	gfm1	99	86.230	ENSGACG00000009864	gfm1	99	86.230	Gasterosteus_aculeatus
ENSKMAG00000020768	gfm1	98	78.095	ENSGGOG00000003085	GFM1	100	76.964	Gorilla_gorilla
ENSKMAG00000020768	gfm1	100	88.102	ENSHBUG00000002120	gfm1	100	88.102	Haplochromis_burtoni
ENSKMAG00000020768	gfm1	97	78.650	ENSHGLG00000016855	GFM1	100	76.393	Heterocephalus_glaber_female
ENSKMAG00000020768	gfm1	97	78.650	ENSHGLG00100013049	GFM1	100	76.393	Heterocephalus_glaber_male
ENSKMAG00000020768	gfm1	100	84.626	ENSHCOG00000007638	gfm1	99	86.250	Hippocampus_comes
ENSKMAG00000020768	gfm1	100	82.754	ENSIPUG00000005873	gfm1	100	82.754	Ictalurus_punctatus
ENSKMAG00000020768	gfm1	97	77.961	ENSSTOG00000010150	GFM1	99	77.732	Ictidomys_tridecemlineatus
ENSKMAG00000020768	gfm1	97	78.483	ENSJJAG00000016447	Gfm1	97	78.483	Jaculus_jaculus
ENSKMAG00000020768	gfm1	94	86.876	ENSLBEG00000021315	gfm1	100	86.876	Labrus_bergylta
ENSKMAG00000020768	gfm1	100	78.877	ENSLACG00000012295	GFM1	99	80.384	Latimeria_chalumnae
ENSKMAG00000020768	gfm1	97	78.129	ENSLOCG00000003778	gfm1	100	78.129	Lepisosteus_oculatus
ENSKMAG00000020768	gfm1	99	75.600	ENSLAFG00000010945	GFM1	99	76.528	Loxodonta_africana
ENSKMAG00000020768	gfm1	100	76.831	ENSMFAG00000035731	GFM1	100	76.831	Macaca_fascicularis
ENSKMAG00000020768	gfm1	100	76.831	ENSMMUG00000004961	GFM1	100	76.831	Macaca_mulatta
ENSKMAG00000020768	gfm1	100	76.831	ENSMNEG00000033245	GFM1	100	76.831	Macaca_nemestrina
ENSKMAG00000020768	gfm1	97	77.241	ENSMLEG00000030908	GFM1	99	76.757	Mandrillus_leucophaeus
ENSKMAG00000020768	gfm1	100	86.631	ENSMAMG00000011760	gfm1	100	86.631	Mastacembelus_armatus
ENSKMAG00000020768	gfm1	100	87.834	ENSMZEG00005016639	gfm1	100	87.834	Maylandia_zebra
ENSKMAG00000020768	gfm1	97	79.558	ENSMGAG00000010641	GFM1	97	79.778	Meleagris_gallopavo
ENSKMAG00000020768	gfm1	97	79.586	ENSMAUG00000000611	Gfm1	97	79.586	Mesocricetus_auratus
ENSKMAG00000020768	gfm1	97	79.752	ENSMICG00000049086	GFM1	99	78.495	Microcebus_murinus
ENSKMAG00000020768	gfm1	100	77.763	ENSMOCG00000000465	Gfm1	100	77.763	Microtus_ochrogaster
ENSKMAG00000020768	gfm1	97	86.915	ENSMMOG00000012538	gfm1	98	87.275	Mola_mola
ENSKMAG00000020768	gfm1	97	78.621	ENSMODG00000015673	GFM1	98	78.621	Monodelphis_domestica
ENSKMAG00000020768	gfm1	96	86.611	ENSMALG00000012508	gfm1	97	85.383	Monopterus_albus
ENSKMAG00000020768	gfm1	100	77.630	MGP_CAROLIEiJ_G0025052	Gfm1	100	77.630	Mus_caroli
ENSKMAG00000020768	gfm1	100	77.364	ENSMUSG00000027774	Gfm1	100	77.364	Mus_musculus
ENSKMAG00000020768	gfm1	100	77.630	MGP_PahariEiJ_G0026495	Gfm1	100	77.630	Mus_pahari
ENSKMAG00000020768	gfm1	100	77.364	MGP_SPRETEiJ_G0025994	Gfm1	100	77.364	Mus_spretus
ENSKMAG00000020768	gfm1	97	79.477	ENSMPUG00000002859	GFM1	98	78.408	Mustela_putorius_furo
ENSKMAG00000020768	gfm1	97	79.614	ENSMLUG00000000452	GFM1	98	78.677	Myotis_lucifugus
ENSKMAG00000020768	gfm1	100	76.667	ENSNGAG00000012375	Gfm1	100	76.667	Nannospalax_galili
ENSKMAG00000020768	gfm1	97	87.912	ENSNBRG00000004631	gfm1	99	88.382	Neolamprologus_brichardi
ENSKMAG00000020768	gfm1	97	78.788	ENSNLEG00000004176	GFM1	100	76.964	Nomascus_leucogenys
ENSKMAG00000020768	gfm1	91	71.029	ENSMEUG00000007784	GFM1	99	71.029	Notamacropus_eugenii
ENSKMAG00000020768	gfm1	100	76.903	ENSOPRG00000009860	GFM1	100	76.903	Ochotona_princeps
ENSKMAG00000020768	gfm1	98	78.610	ENSODEG00000004316	GFM1	100	77.188	Octodon_degus
ENSKMAG00000020768	gfm1	100	87.968	ENSONIG00000003772	gfm1	100	87.968	Oreochromis_niloticus
ENSKMAG00000020768	gfm1	98	79.155	ENSOCUG00000013561	GFM1	99	78.313	Oryctolagus_cuniculus
ENSKMAG00000020768	gfm1	95	88.136	ENSORLG00000006487	gfm1	100	88.136	Oryzias_latipes
ENSKMAG00000020768	gfm1	100	87.433	ENSORLG00020003362	gfm1	100	87.433	Oryzias_latipes_hni
ENSKMAG00000020768	gfm1	100	87.299	ENSORLG00015005829	gfm1	100	87.299	Oryzias_latipes_hsok
ENSKMAG00000020768	gfm1	100	87.433	ENSOMEG00000012894	gfm1	100	87.433	Oryzias_melastigma
ENSKMAG00000020768	gfm1	97	79.063	ENSOGAG00000008298	GFM1	96	79.063	Otolemur_garnettii
ENSKMAG00000020768	gfm1	96	79.057	ENSOARG00000002409	GFM1	99	79.057	Ovis_aries
ENSKMAG00000020768	gfm1	98	78.095	ENSPPAG00000033881	GFM1	100	76.964	Pan_paniscus
ENSKMAG00000020768	gfm1	97	79.890	ENSPPRG00000009281	GFM1	96	79.890	Panthera_pardus
ENSKMAG00000020768	gfm1	97	79.752	ENSPTIG00000012416	GFM1	96	79.752	Panthera_tigris_altaica
ENSKMAG00000020768	gfm1	98	78.095	ENSPTRG00000015570	GFM1	100	76.964	Pan_troglodytes
ENSKMAG00000020768	gfm1	100	76.831	ENSPANG00000016512	GFM1	100	76.831	Papio_anubis
ENSKMAG00000020768	gfm1	100	82.219	ENSPKIG00000004876	gfm1	100	82.219	Paramormyrops_kingsleyae
ENSKMAG00000020768	gfm1	100	79.545	ENSPSIG00000012567	GFM1	99	80.514	Pelodiscus_sinensis
ENSKMAG00000020768	gfm1	97	84.414	ENSPMGG00000014068	gfm1	100	84.414	Periophthalmus_magnuspinnatus
ENSKMAG00000020768	gfm1	100	77.364	ENSPEMG00000008942	Gfm1	100	77.364	Peromyscus_maniculatus_bairdii
ENSKMAG00000020768	gfm1	86	76.050	ENSPCIG00000020195	GFM1	98	77.352	Phascolarctos_cinereus
ENSKMAG00000020768	gfm1	100	89.171	ENSPFOG00000011022	gfm1	100	89.171	Poecilia_formosa
ENSKMAG00000020768	gfm1	97	89.394	ENSPLAG00000019585	gfm1	100	88.624	Poecilia_latipinna
ENSKMAG00000020768	gfm1	100	89.037	ENSPMEG00000012376	gfm1	100	89.037	Poecilia_mexicana
ENSKMAG00000020768	gfm1	100	88.636	ENSPREG00000001332	gfm1	95	88.636	Poecilia_reticulata
ENSKMAG00000020768	gfm1	98	77.959	ENSPPYG00000014244	GFM1	100	76.831	Pongo_abelii
ENSKMAG00000020768	gfm1	94	78.094	ENSPCAG00000008934	GFM1	100	78.094	Procavia_capensis
ENSKMAG00000020768	gfm1	97	79.339	ENSPCOG00000022259	GFM1	100	77.188	Propithecus_coquereli
ENSKMAG00000020768	gfm1	97	78.926	ENSPVAG00000013605	GFM1	96	78.926	Pteropus_vampyrus
ENSKMAG00000020768	gfm1	100	87.567	ENSPNYG00000006037	gfm1	100	87.567	Pundamilia_nyererei
ENSKMAG00000020768	gfm1	100	82.888	ENSPNAG00000001237	gfm1	100	82.888	Pygocentrus_nattereri
ENSKMAG00000020768	gfm1	97	78.621	ENSRNOG00000012873	Gfm1	97	78.621	Rattus_norvegicus
ENSKMAG00000020768	gfm1	98	77.959	ENSRBIG00000031363	GFM1	100	76.831	Rhinopithecus_bieti
ENSKMAG00000020768	gfm1	98	78.095	ENSRROG00000031081	GFM1	100	76.964	Rhinopithecus_roxellana
ENSKMAG00000020768	gfm1	92	55.988	YLR069C	-	90	55.988	Saccharomyces_cerevisiae
ENSKMAG00000020768	gfm1	100	76.964	ENSSBOG00000023252	GFM1	100	76.964	Saimiri_boliviensis_boliviensis
ENSKMAG00000020768	gfm1	97	79.115	ENSSHAG00000017772	GFM1	98	78.125	Sarcophilus_harrisii
ENSKMAG00000020768	gfm1	100	82.644	ENSSFOG00015003117	gfm1	100	82.644	Scleropages_formosus
ENSKMAG00000020768	gfm1	100	85.695	ENSSMAG00000013221	gfm1	100	85.695	Scophthalmus_maximus
ENSKMAG00000020768	gfm1	100	86.631	ENSSDUG00000018665	gfm1	100	86.631	Seriola_dumerili
ENSKMAG00000020768	gfm1	100	86.497	ENSSLDG00000020606	gfm1	100	86.497	Seriola_lalandi_dorsalis
ENSKMAG00000020768	gfm1	97	77.103	ENSSPUG00000018686	GFM1	98	77.166	Sphenodon_punctatus
ENSKMAG00000020768	gfm1	100	87.701	ENSSPAG00000008800	gfm1	100	87.701	Stegastes_partitus
ENSKMAG00000020768	gfm1	98	78.261	ENSSSCG00000025651	GFM1	97	78.261	Sus_scrofa
ENSKMAG00000020768	gfm1	100	83.957	ENSTRUG00000009244	gfm1	100	83.957	Takifugu_rubripes
ENSKMAG00000020768	gfm1	100	86.364	ENSTNIG00000007729	gfm1	100	86.364	Tetraodon_nigroviridis
ENSKMAG00000020768	gfm1	90	71.407	ENSTBEG00000017404	GFM1	89	71.407	Tupaia_belangeri
ENSKMAG00000020768	gfm1	96	78.969	ENSTTRG00000001735	GFM1	95	78.969	Tursiops_truncatus
ENSKMAG00000020768	gfm1	97	79.477	ENSUAMG00000026381	GFM1	96	79.477	Ursus_americanus
ENSKMAG00000020768	gfm1	97	79.477	ENSUMAG00000011268	GFM1	96	79.477	Ursus_maritimus
ENSKMAG00000020768	gfm1	97	75.586	ENSVPAG00000009444	GFM1	96	75.586	Vicugna_pacos
ENSKMAG00000020768	gfm1	98	78.962	ENSVVUG00000020091	GFM1	100	79.734	Vulpes_vulpes
ENSKMAG00000020768	gfm1	100	79.920	ENSXETG00000032551	GFM1	100	79.920	Xenopus_tropicalis
ENSKMAG00000020768	gfm1	54	88.586	ENSXCOG00000012590	gfm1	92	88.586	Xiphophorus_couchianus
ENSKMAG00000020768	gfm1	100	88.636	ENSXMAG00000000261	gfm1	100	88.636	Xiphophorus_maculatus