EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000021023 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 24463 bases
Position: chrLWHD01000062.1:1626469-1650931
Accession: 108239220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000028447	RRM_1	PF00076.22	0.00015	1	1
ENSKMAP00000028440	RRM_1	PF00076.22	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000028805	-	4482	-	ENSKMAP00000028447	1493 (aa)	-	-
ENSKMAT00000028798	-	5286	XM_017421803	ENSKMAP00000028440	1761 (aa)	XP_017277292	-

Gene Model

Click here to download ENSKMAG00000021023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021023	tnrc6c1	100	50.489	ENSG00000078687	TNRC6C	100	49.138	Homo_sapiens
ENSKMAG00000021023	tnrc6c1	100	80.762	ENSAPOG00000019749	tnrc6c1	98	79.965	Acanthochromis_polyacanthus
ENSKMAG00000021023	tnrc6c1	97	48.691	ENSAMEG00000013756	TNRC6C	98	48.188	Ailuropoda_melanoleuca
ENSKMAG00000021023	tnrc6c1	100	74.151	ENSACIG00000008075	tnrc6c1	97	75.841	Amphilophus_citrinellus
ENSKMAG00000021023	tnrc6c1	100	79.104	ENSAOCG00000023968	tnrc6c1	98	81.856	Amphiprion_ocellaris
ENSKMAG00000021023	tnrc6c1	100	79.146	ENSAPEG00000009020	tnrc6c1	98	81.808	Amphiprion_percula
ENSKMAG00000021023	tnrc6c1	97	50.581	ENSAPLG00000005456	TNRC6C	99	48.884	Anas_platyrhynchos
ENSKMAG00000021023	tnrc6c1	97	50.907	ENSACAG00000016198	TNRC6C	91	49.781	Anolis_carolinensis
ENSKMAG00000021023	tnrc6c1	100	50.806	ENSANAG00000021554	TNRC6C	99	48.305	Aotus_nancymaae
ENSKMAG00000021023	tnrc6c1	100	69.156	ENSACLG00000000424	tnrc6c1	97	73.271	Astatotilapia_calliptera
ENSKMAG00000021023	tnrc6c1	96	56.814	ENSBTAG00000018658	TNRC6C	97	47.751	Bos_taurus
ENSKMAG00000021023	tnrc6c1	100	50.432	ENSCJAG00000019431	TNRC6C	99	47.859	Callithrix_jacchus
ENSKMAG00000021023	tnrc6c1	97	49.709	ENSCAFG00000005224	TNRC6C	99	47.539	Canis_familiaris
ENSKMAG00000021023	tnrc6c1	97	50.531	ENSCAFG00020006661	TNRC6C	100	47.386	Canis_lupus_dingo
ENSKMAG00000021023	tnrc6c1	97	50.448	ENSCHIG00000026004	TNRC6C	94	50.831	Capra_hircus
ENSKMAG00000021023	tnrc6c1	97	50.233	ENSTSYG00000005403	TNRC6C	94	50.570	Carlito_syrichta
ENSKMAG00000021023	tnrc6c1	100	46.334	ENSCAPG00000007307	TNRC6C	99	43.884	Cavia_aperea
ENSKMAG00000021023	tnrc6c1	100	49.539	ENSCPOG00000000467	TNRC6C	99	47.377	Cavia_porcellus
ENSKMAG00000021023	tnrc6c1	100	50.604	ENSCCAG00000030524	TNRC6C	99	48.038	Cebus_capucinus
ENSKMAG00000021023	tnrc6c1	100	50.690	ENSCATG00000033135	TNRC6C	99	48.089	Cercocebus_atys
ENSKMAG00000021023	tnrc6c1	100	50.808	ENSCLAG00000011139	TNRC6C	99	47.726	Chinchilla_lanigera
ENSKMAG00000021023	tnrc6c1	100	49.549	ENSCSAG00000005167	TNRC6C	99	48.181	Chlorocebus_sabaeus
ENSKMAG00000021023	tnrc6c1	66	64.706	ENSCHOG00000000088	TNRC6C	52	64.706	Choloepus_hoffmanni
ENSKMAG00000021023	tnrc6c1	97	52.421	ENSCPBG00000027960	TNRC6C	98	48.824	Chrysemys_picta_bellii
ENSKMAG00000021023	tnrc6c1	100	50.635	ENSCANG00000041771	TNRC6C	99	47.958	Colobus_angolensis_palliatus
ENSKMAG00000021023	tnrc6c1	97	50.801	ENSCGRG00001022686	Tnrc6c	99	46.740	Cricetulus_griseus_chok1gshd
ENSKMAG00000021023	tnrc6c1	97	51.104	ENSCGRG00000018041	Tnrc6c	99	46.740	Cricetulus_griseus_crigri
ENSKMAG00000021023	tnrc6c1	100	71.925	ENSCSEG00000012744	tnrc6c1	99	69.804	Cynoglossus_semilaevis
ENSKMAG00000021023	tnrc6c1	100	59.543	ENSDARG00000076847	tnrc6c1	99	59.755	Danio_rerio
ENSKMAG00000021023	tnrc6c1	97	50.269	ENSDNOG00000003247	TNRC6C	98	49.888	Dasypus_novemcinctus
ENSKMAG00000021023	tnrc6c1	97	48.280	ENSDORG00000004558	Tnrc6c	99	44.852	Dipodomys_ordii
ENSKMAG00000021023	tnrc6c1	81	54.828	ENSETEG00000005527	TNRC6C	79	52.192	Echinops_telfairi
ENSKMAG00000021023	tnrc6c1	97	50.267	ENSEASG00005004799	TNRC6C	94	50.400	Equus_asinus_asinus
ENSKMAG00000021023	tnrc6c1	97	50.267	ENSECAG00000012486	TNRC6C	98	48.359	Equus_caballus
ENSKMAG00000021023	tnrc6c1	90	56.379	ENSEEUG00000010008	TNRC6C	93	53.958	Erinaceus_europaeus
ENSKMAG00000021023	tnrc6c1	97	50.119	ENSFCAG00000028358	TNRC6C	100	49.106	Felis_catus
ENSKMAG00000021023	tnrc6c1	97	49.656	ENSFALG00000000848	TNRC6C	94	50.766	Ficedula_albicollis
ENSKMAG00000021023	tnrc6c1	100	50.288	ENSFDAG00000010368	TNRC6C	78	54.212	Fukomys_damarensis
ENSKMAG00000021023	tnrc6c1	100	80.386	ENSFHEG00000002936	tnrc6c1	98	81.342	Fundulus_heteroclitus
ENSKMAG00000021023	tnrc6c1	97	52.241	ENSGALG00000001725	TNRC6C	77	57.344	Gallus_gallus
ENSKMAG00000021023	tnrc6c1	100	80.410	ENSGAFG00000019019	tnrc6c1	100	79.540	Gambusia_affinis
ENSKMAG00000021023	tnrc6c1	100	73.681	ENSGACG00000012320	tnrc6c1	99	69.502	Gasterosteus_aculeatus
ENSKMAG00000021023	tnrc6c1	97	53.709	ENSGAGG00000022043	TNRC6C	98	49.891	Gopherus_agassizii
ENSKMAG00000021023	tnrc6c1	100	50.461	ENSGGOG00000011304	TNRC6C	99	48.571	Gorilla_gorilla
ENSKMAG00000021023	tnrc6c1	100	74.922	ENSHBUG00000010846	tnrc6c1	100	75.405	Haplochromis_burtoni
ENSKMAG00000021023	tnrc6c1	100	50.115	ENSHGLG00000004809	TNRC6C	71	54.140	Heterocephalus_glaber_female
ENSKMAG00000021023	tnrc6c1	100	49.771	ENSHGLG00100012597	TNRC6C	71	53.648	Heterocephalus_glaber_male
ENSKMAG00000021023	tnrc6c1	100	59.515	ENSIPUG00000000818	tnrc6c1	99	56.598	Ictalurus_punctatus
ENSKMAG00000021023	tnrc6c1	85	54.811	ENSSTOG00000009101	TNRC6C	99	48.197	Ictidomys_tridecemlineatus
ENSKMAG00000021023	tnrc6c1	97	50.593	ENSJJAG00000017055	Tnrc6c	99	45.350	Jaculus_jaculus
ENSKMAG00000021023	tnrc6c1	84	67.039	ENSLACG00000015283	TNRC6C	73	67.039	Latimeria_chalumnae
ENSKMAG00000021023	tnrc6c1	99	56.410	ENSLOCG00000013377	tnrc6c1	99	57.077	Lepisosteus_oculatus
ENSKMAG00000021023	tnrc6c1	97	50.711	ENSLAFG00000011122	TNRC6C	98	49.000	Loxodonta_africana
ENSKMAG00000021023	tnrc6c1	100	50.690	ENSMFAG00000043943	TNRC6C	98	48.854	Macaca_fascicularis
ENSKMAG00000021023	tnrc6c1	100	50.690	ENSMMUG00000011924	TNRC6C	98	48.281	Macaca_mulatta
ENSKMAG00000021023	tnrc6c1	100	50.633	ENSMNEG00000030405	TNRC6C	99	47.990	Macaca_nemestrina
ENSKMAG00000021023	tnrc6c1	100	50.690	ENSMLEG00000033436	TNRC6C	99	48.089	Mandrillus_leucophaeus
ENSKMAG00000021023	tnrc6c1	100	76.412	ENSMAMG00000023613	tnrc6c1	100	78.894	Mastacembelus_armatus
ENSKMAG00000021023	tnrc6c1	100	74.891	ENSMZEG00005010920	tnrc6c1	98	75.688	Maylandia_zebra
ENSKMAG00000021023	tnrc6c1	90	68.284	ENSMGAG00000003906	TNRC6C	80	66.415	Meleagris_gallopavo
ENSKMAG00000021023	tnrc6c1	97	50.473	ENSMAUG00000021618	Tnrc6c	94	50.551	Mesocricetus_auratus
ENSKMAG00000021023	tnrc6c1	100	50.115	ENSMICG00000003952	TNRC6C	100	49.711	Microcebus_murinus
ENSKMAG00000021023	tnrc6c1	97	51.014	ENSMOCG00000015879	Tnrc6c	99	47.838	Microtus_ochrogaster
ENSKMAG00000021023	tnrc6c1	100	78.335	ENSMMOG00000005203	tnrc6c1	100	77.722	Mola_mola
ENSKMAG00000021023	tnrc6c1	97	51.474	ENSMODG00000001785	TNRC6C	71	54.290	Monodelphis_domestica
ENSKMAG00000021023	tnrc6c1	97	50.563	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	47.510	Mus_caroli
ENSKMAG00000021023	tnrc6c1	97	50.564	ENSMUSG00000025571	Tnrc6c	99	47.512	Mus_musculus
ENSKMAG00000021023	tnrc6c1	97	50.711	MGP_PahariEiJ_G0018593	Tnrc6c	99	47.619	Mus_pahari
ENSKMAG00000021023	tnrc6c1	97	50.594	MGP_SPRETEiJ_G0018309	Tnrc6c	99	47.294	Mus_spretus
ENSKMAG00000021023	tnrc6c1	98	48.592	ENSMPUG00000013348	TNRC6C	96	48.002	Mustela_putorius_furo
ENSKMAG00000021023	tnrc6c1	97	47.897	ENSMLUG00000014431	TNRC6C	96	46.310	Myotis_lucifugus
ENSKMAG00000021023	tnrc6c1	97	50.297	ENSNGAG00000012203	Tnrc6c	99	46.357	Nannospalax_galili
ENSKMAG00000021023	tnrc6c1	100	75.218	ENSNBRG00000005344	tnrc6c1	98	74.619	Neolamprologus_brichardi
ENSKMAG00000021023	tnrc6c1	100	48.079	ENSNLEG00000000047	TNRC6C	97	47.382	Nomascus_leucogenys
ENSKMAG00000021023	tnrc6c1	93	64.906	ENSMEUG00000005104	TNRC6C	73	64.055	Notamacropus_eugenii
ENSKMAG00000021023	tnrc6c1	98	51.086	ENSODEG00000012499	TNRC6C	100	50.231	Octodon_degus
ENSKMAG00000021023	tnrc6c1	100	75.998	ENSONIG00000002210	tnrc6c1	100	75.561	Oreochromis_niloticus
ENSKMAG00000021023	tnrc6c1	71	93.333	ENSOANG00000009758	-	69	56.452	Ornithorhynchus_anatinus
ENSKMAG00000021023	tnrc6c1	100	73.714	ENSORLG00000009837	tnrc6c1	100	80.657	Oryzias_latipes
ENSKMAG00000021023	tnrc6c1	100	73.714	ENSORLG00020016510	tnrc6c1	100	74.606	Oryzias_latipes_hni
ENSKMAG00000021023	tnrc6c1	78	69.771	ENSORLG00015000171	tnrc6c1	98	70.481	Oryzias_latipes_hsok
ENSKMAG00000021023	tnrc6c1	100	73.932	ENSOMEG00000000357	tnrc6c1	98	75.015	Oryzias_melastigma
ENSKMAG00000021023	tnrc6c1	97	48.899	ENSOGAG00000007197	TNRC6C	94	49.701	Otolemur_garnettii
ENSKMAG00000021023	tnrc6c1	93	47.716	ENSOARG00000006041	TNRC6C	99	45.119	Ovis_aries
ENSKMAG00000021023	tnrc6c1	100	50.576	ENSPPAG00000027160	TNRC6C	99	48.271	Pan_paniscus
ENSKMAG00000021023	tnrc6c1	97	49.881	ENSPPRG00000018881	TNRC6C	100	49.020	Panthera_pardus
ENSKMAG00000021023	tnrc6c1	92	50.211	ENSPTIG00000008791	TNRC6C	91	45.407	Panthera_tigris_altaica
ENSKMAG00000021023	tnrc6c1	100	50.576	ENSPTRG00000009699	TNRC6C	99	48.012	Pan_troglodytes
ENSKMAG00000021023	tnrc6c1	100	50.778	ENSPANG00000019994	TNRC6C	99	48.040	Papio_anubis
ENSKMAG00000021023	tnrc6c1	100	54.670	ENSPKIG00000005428	tnrc6c1	100	56.439	Paramormyrops_kingsleyae
ENSKMAG00000021023	tnrc6c1	97	51.497	ENSPSIG00000018069	TNRC6C	99	48.059	Pelodiscus_sinensis
ENSKMAG00000021023	tnrc6c1	92	70.705	ENSPMGG00000022911	tnrc6c1	98	78.367	Periophthalmus_magnuspinnatus
ENSKMAG00000021023	tnrc6c1	100	50.287	ENSPEMG00000009785	Tnrc6c	100	47.438	Peromyscus_maniculatus_bairdii
ENSKMAG00000021023	tnrc6c1	51	40.171	ENSPCIG00000017421	-	65	42.344	Phascolarctos_cinereus
ENSKMAG00000021023	tnrc6c1	100	79.801	ENSPFOG00000012560	tnrc6c1	99	79.058	Poecilia_formosa
ENSKMAG00000021023	tnrc6c1	100	80.671	ENSPLAG00000021055	tnrc6c1	100	80.050	Poecilia_latipinna
ENSKMAG00000021023	tnrc6c1	100	49.464	ENSPPYG00000008679	TNRC6C	99	48.283	Pongo_abelii
ENSKMAG00000021023	tnrc6c1	85	67.512	ENSPCAG00000012510	TNRC6C	68	66.129	Procavia_capensis
ENSKMAG00000021023	tnrc6c1	97	50.857	ENSPCOG00000021451	TNRC6C	94	50.722	Propithecus_coquereli
ENSKMAG00000021023	tnrc6c1	92	66.949	ENSPVAG00000002008	TNRC6C	95	66.949	Pteropus_vampyrus
ENSKMAG00000021023	tnrc6c1	100	74.658	ENSPNYG00000014477	tnrc6c1	100	74.101	Pundamilia_nyererei
ENSKMAG00000021023	tnrc6c1	97	50.506	ENSRNOG00000022395	Tnrc6c	94	50.155	Rattus_norvegicus
ENSKMAG00000021023	tnrc6c1	100	50.720	ENSRBIG00000027777	TNRC6C	98	48.878	Rhinopithecus_bieti
ENSKMAG00000021023	tnrc6c1	100	50.720	ENSRROG00000042912	TNRC6C	99	48.062	Rhinopithecus_roxellana
ENSKMAG00000021023	tnrc6c1	100	49.606	ENSSBOG00000023981	TNRC6C	98	48.193	Saimiri_boliviensis_boliviensis
ENSKMAG00000021023	tnrc6c1	56	61.596	ENSSHAG00000018330	-	100	63.057	Sarcophilus_harrisii
ENSKMAG00000021023	tnrc6c1	99	55.935	ENSSFOG00015006475	tnrc6c1	99	55.515	Scleropages_formosus
ENSKMAG00000021023	tnrc6c1	91	61.778	ENSSFOG00015004735	-	99	67.277	Scleropages_formosus
ENSKMAG00000021023	tnrc6c1	100	75.746	ENSSMAG00000012761	tnrc6c1	100	76.306	Scophthalmus_maximus
ENSKMAG00000021023	tnrc6c1	100	80.543	ENSSDUG00000002366	tnrc6c1	97	78.929	Seriola_dumerili
ENSKMAG00000021023	tnrc6c1	100	79.065	ENSSLDG00000025613	tnrc6c1	100	79.065	Seriola_lalandi_dorsalis
ENSKMAG00000021023	tnrc6c1	62	67.227	ENSSARG00000006816	TNRC6C	90	67.227	Sorex_araneus
ENSKMAG00000021023	tnrc6c1	78	74.468	ENSSPUG00000007341	TNRC6C	91	73.810	Sphenodon_punctatus
ENSKMAG00000021023	tnrc6c1	98	79.356	ENSSPAG00000014977	tnrc6c1	95	81.161	Stegastes_partitus
ENSKMAG00000021023	tnrc6c1	97	50.711	ENSSSCG00000034373	TNRC6C	100	48.338	Sus_scrofa
ENSKMAG00000021023	tnrc6c1	97	51.634	ENSTGUG00000007733	TNRC6C	99	48.526	Taeniopygia_guttata
ENSKMAG00000021023	tnrc6c1	100	72.659	ENSTRUG00000011685	tnrc6c1	100	75.217	Takifugu_rubripes
ENSKMAG00000021023	tnrc6c1	100	72.117	ENSTNIG00000005273	tnrc6c1	100	77.377	Tetraodon_nigroviridis
ENSKMAG00000021023	tnrc6c1	69	49.783	ENSTBEG00000005046	TNRC6C	100	48.938	Tupaia_belangeri
ENSKMAG00000021023	tnrc6c1	97	50.978	ENSTTRG00000010828	TNRC6C	99	47.978	Tursiops_truncatus
ENSKMAG00000021023	tnrc6c1	99	46.823	ENSUMAG00000013614	TNRC6C	99	46.640	Ursus_maritimus
ENSKMAG00000021023	tnrc6c1	53	51.149	ENSVPAG00000006765	-	95	52.241	Vicugna_pacos
ENSKMAG00000021023	tnrc6c1	97	50.654	ENSVVUG00000015268	TNRC6C	100	49.942	Vulpes_vulpes
ENSKMAG00000021023	tnrc6c1	97	50.209	ENSXETG00000019470	tnrc6c	80	52.988	Xenopus_tropicalis
ENSKMAG00000021023	tnrc6c1	100	81.527	ENSXMAG00000025971	tnrc6c1	100	79.726	Xiphophorus_maculatus