EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000021039 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein rab7-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 13018 bases
Position: chrLWHD01000140.1:681608-694625
Accession: 108244383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000028381	MMR_HSR1	PF01926.23	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000028739	-	3497	XM_017430533	ENSKMAP00000028381	238 (aa)	XP_017286022	-

Gene Model

Click here to download ENSKMAG00000021039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000021039	si:dkey-13a21.4	69	33.333	ENSKMAG00000015488	rab25b	77	34.146
ENSKMAG00000021039	si:dkey-13a21.4	94	31.556	ENSKMAG00000020392	rab15	77	34.524
ENSKMAG00000021039	si:dkey-13a21.4	74	34.831	ENSKMAG00000001908	rab13	92	34.831
ENSKMAG00000021039	si:dkey-13a21.4	63	31.126	ENSKMAG00000017893	mras	71	31.126
ENSKMAG00000021039	si:dkey-13a21.4	72	30.939	ENSKMAG00000004945	rab25a	84	30.939
ENSKMAG00000021039	si:dkey-13a21.4	75	33.516	ENSKMAG00000009799	rab2a	81	34.091
ENSKMAG00000021039	si:dkey-13a21.4	66	41.139	ENSKMAG00000006854	rab35b	76	40.506
ENSKMAG00000021039	si:dkey-13a21.4	80	31.795	ENSKMAG00000018973	-	86	31.795
ENSKMAG00000021039	si:dkey-13a21.4	66	32.500	ENSKMAG00000006170	-	71	32.500
ENSKMAG00000021039	si:dkey-13a21.4	75	33.880	ENSKMAG00000014038	-	85	33.880
ENSKMAG00000021039	si:dkey-13a21.4	71	35.294	ENSKMAG00000005111	rab5aa	77	35.294
ENSKMAG00000021039	si:dkey-13a21.4	66	32.500	ENSKMAG00000009033	rab11bb	71	32.500
ENSKMAG00000021039	si:dkey-13a21.4	74	36.066	ENSKMAG00000012778	si:dkey-34d22.5	81	36.066
ENSKMAG00000021039	si:dkey-13a21.4	68	34.146	ENSKMAG00000017417	-	73	34.146
ENSKMAG00000021039	si:dkey-13a21.4	69	51.205	ENSKMAG00000003646	-	83	51.205
ENSKMAG00000021039	si:dkey-13a21.4	78	33.854	ENSKMAG00000015507	rab6ba	90	33.854
ENSKMAG00000021039	si:dkey-13a21.4	61	30.345	ENSKMAG00000001922	Ha-ras	80	31.410
ENSKMAG00000021039	si:dkey-13a21.4	66	32.500	ENSKMAG00000006082	-	71	32.500
ENSKMAG00000021039	si:dkey-13a21.4	69	30.120	ENSKMAG00000000984	rasd4	78	30.120
ENSKMAG00000021039	si:dkey-13a21.4	68	53.049	ENSKMAG00000019964	rab9b	81	53.049
ENSKMAG00000021039	si:dkey-13a21.4	71	36.686	ENSKMAG00000002545	-	78	36.686
ENSKMAG00000021039	si:dkey-13a21.4	68	38.788	ENSKMAG00000002862	zgc:101559	68	38.788
ENSKMAG00000021039	si:dkey-13a21.4	93	31.799	ENSKMAG00000003105	rab33ba	87	30.769
ENSKMAG00000021039	si:dkey-13a21.4	53	39.062	ENSKMAG00000017150	-	57	39.062
ENSKMAG00000021039	si:dkey-13a21.4	94	32.444	ENSKMAG00000012657	-	77	34.286
ENSKMAG00000021039	si:dkey-13a21.4	71	32.948	ENSKMAG00000019341	rab34b	67	32.948
ENSKMAG00000021039	si:dkey-13a21.4	69	36.747	ENSKMAG00000011954	dnajc27	61	36.747
ENSKMAG00000021039	si:dkey-13a21.4	66	30.818	ENSKMAG00000020448	rheb	84	30.818
ENSKMAG00000021039	si:dkey-13a21.4	71	36.095	ENSKMAG00000011278	rab6bb	79	36.095
ENSKMAG00000021039	si:dkey-13a21.4	65	36.774	ENSKMAG00000013146	-	79	36.774
ENSKMAG00000021039	si:dkey-13a21.4	70	34.731	ENSKMAG00000017487	rab14	76	34.731
ENSKMAG00000021039	si:dkey-13a21.4	71	32.370	ENSKMAG00000019647	rab34a	64	32.370
ENSKMAG00000021039	si:dkey-13a21.4	75	55.000	ENSKMAG00000006812	RAB7A	87	55.000
ENSKMAG00000021039	si:dkey-13a21.4	72	32.955	ENSKMAG00000006810	rab1ba	86	32.955
ENSKMAG00000021039	si:dkey-13a21.4	66	39.623	ENSKMAG00000007267	rab42a	72	39.623
ENSKMAG00000021039	si:dkey-13a21.4	66	33.750	ENSKMAG00000011905	rab11a	72	33.750
ENSKMAG00000021039	si:dkey-13a21.4	66	31.013	ENSKMAG00000015516	rab11al	72	32.500
ENSKMAG00000021039	si:dkey-13a21.4	73	34.857	ENSKMAG00000009856	zgc:171927	80	34.857
ENSKMAG00000021039	si:dkey-13a21.4	71	39.645	ENSKMAG00000004439	rab30	81	39.645
ENSKMAG00000021039	si:dkey-13a21.4	76	53.804	ENSKMAG00000020013	-	89	53.804
ENSKMAG00000021039	si:dkey-13a21.4	68	37.500	ENSKMAG00000006593	rab33a	77	37.500
ENSKMAG00000021039	si:dkey-13a21.4	66	38.365	ENSKMAG00000003494	si:dkey-16l2.16	73	38.365
ENSKMAG00000021039	si:dkey-13a21.4	70	51.497	ENSKMAG00000017662	rab9a	83	51.497
ENSKMAG00000021039	si:dkey-13a21.4	79	33.862	ENSKMAG00000020250	rab4a	87	33.862
ENSKMAG00000021039	si:dkey-13a21.4	71	33.136	ENSKMAG00000001191	RAB15	79	33.136
ENSKMAG00000021039	si:dkey-13a21.4	82	34.518	ENSKMAG00000018270	rab23	73	36.364
ENSKMAG00000021039	si:dkey-13a21.4	68	41.463	ENSKMAG00000014705	rab22a	82	41.463
ENSKMAG00000021039	si:dkey-13a21.4	70	37.126	ENSKMAG00000007364	rab18b	80	37.126
ENSKMAG00000021039	si:dkey-13a21.4	74	34.637	ENSKMAG00000017357	rab1ab	86	34.637
ENSKMAG00000021039	si:dkey-13a21.4	66	36.875	ENSKMAG00000008625	RAB39B	74	36.875
ENSKMAG00000021039	si:dkey-13a21.4	70	35.329	ENSKMAG00000011301	-	76	35.329
ENSKMAG00000021039	si:dkey-13a21.4	63	40.000	ENSKMAG00000020034	-	52	40.000
ENSKMAG00000021039	si:dkey-13a21.4	68	35.976	ENSKMAG00000020038	rab5c	73	35.976
ENSKMAG00000021039	si:dkey-13a21.4	69	35.928	ENSKMAG00000020056	rab12	68	35.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021039	si:dkey-13a21.4	74	80.114	ENSACIG00000011024	si:dkey-13a21.4	86	80.114	Amphilophus_citrinellus
ENSKMAG00000021039	si:dkey-13a21.4	76	77.901	ENSAOCG00000020491	si:dkey-13a21.4	86	78.977	Amphiprion_ocellaris
ENSKMAG00000021039	si:dkey-13a21.4	73	79.885	ENSAPEG00000023338	si:dkey-13a21.4	79	79.885	Amphiprion_percula
ENSKMAG00000021039	si:dkey-13a21.4	74	76.705	ENSATEG00000014958	si:dkey-13a21.4	86	76.705	Anabas_testudineus
ENSKMAG00000021039	si:dkey-13a21.4	69	59.281	ENSACAG00000012345	-	83	59.281	Anolis_carolinensis
ENSKMAG00000021039	si:dkey-13a21.4	74	79.545	ENSACLG00000021109	si:dkey-13a21.4	85	79.545	Astatotilapia_calliptera
ENSKMAG00000021039	si:dkey-13a21.4	70	57.988	ENSAMXG00000032663	si:dkey-13a21.4	78	57.988	Astyanax_mexicanus
ENSKMAG00000021039	si:dkey-13a21.4	73	56.818	WBGene00004271	rab-7	84	56.818	Caenorhabditis_elegans
ENSKMAG00000021039	si:dkey-13a21.4	74	81.818	ENSCVAG00000001150	si:dkey-13a21.4	86	81.818	Cyprinodon_variegatus
ENSKMAG00000021039	si:dkey-13a21.4	70	68.072	ENSDARG00000026098	si:dkey-13a21.4	81	68.072	Danio_rerio
ENSKMAG00000021039	si:dkey-13a21.4	76	50.538	ENSDNOG00000043559	-	92	50.000	Dasypus_novemcinctus
ENSKMAG00000021039	si:dkey-13a21.4	79	77.202	ENSFHEG00000002502	si:dkey-13a21.4	86	81.921	Fundulus_heteroclitus
ENSKMAG00000021039	si:dkey-13a21.4	74	80.114	ENSGAFG00000020102	si:dkey-13a21.4	86	80.114	Gambusia_affinis
ENSKMAG00000021039	si:dkey-13a21.4	74	80.114	ENSHBUG00000014023	si:dkey-13a21.4	85	80.114	Haplochromis_burtoni
ENSKMAG00000021039	si:dkey-13a21.4	74	75.000	ENSLBEG00000018180	si:dkey-13a21.4	86	75.000	Labrus_bergylta
ENSKMAG00000021039	si:dkey-13a21.4	74	63.687	ENSLOCG00000014749	si:dkey-13a21.4	87	63.687	Lepisosteus_oculatus
ENSKMAG00000021039	si:dkey-13a21.4	70	54.491	ENSLAFG00000028984	-	81	54.491	Loxodonta_africana
ENSKMAG00000021039	si:dkey-13a21.4	74	78.409	ENSMAMG00000021095	si:dkey-13a21.4	86	78.409	Mastacembelus_armatus
ENSKMAG00000021039	si:dkey-13a21.4	74	79.545	ENSMZEG00005010220	si:dkey-13a21.4	85	79.545	Maylandia_zebra
ENSKMAG00000021039	si:dkey-13a21.4	74	80.000	ENSNBRG00000023214	si:dkey-13a21.4	85	80.000	Neolamprologus_brichardi
ENSKMAG00000021039	si:dkey-13a21.4	74	78.977	ENSONIG00000020296	si:dkey-13a21.4	86	78.977	Oreochromis_niloticus
ENSKMAG00000021039	si:dkey-13a21.4	74	78.977	ENSORLG00000025098	si:dkey-13a21.4	86	78.977	Oryzias_latipes
ENSKMAG00000021039	si:dkey-13a21.4	74	77.841	ENSORLG00020019465	si:dkey-13a21.4	86	77.841	Oryzias_latipes_hni
ENSKMAG00000021039	si:dkey-13a21.4	74	78.409	ENSORLG00015015121	si:dkey-13a21.4	86	78.409	Oryzias_latipes_hsok
ENSKMAG00000021039	si:dkey-13a21.4	71	64.118	ENSPKIG00000008691	si:dkey-13a21.4	82	65.625	Paramormyrops_kingsleyae
ENSKMAG00000021039	si:dkey-13a21.4	74	68.750	ENSPMGG00000023170	si:dkey-13a21.4	83	69.886	Periophthalmus_magnuspinnatus
ENSKMAG00000021039	si:dkey-13a21.4	74	80.682	ENSPFOG00000015409	si:dkey-13a21.4	86	80.682	Poecilia_formosa
ENSKMAG00000021039	si:dkey-13a21.4	74	80.682	ENSPLAG00000019688	si:dkey-13a21.4	86	80.682	Poecilia_latipinna
ENSKMAG00000021039	si:dkey-13a21.4	74	80.682	ENSPMEG00000019159	si:dkey-13a21.4	86	80.682	Poecilia_mexicana
ENSKMAG00000021039	si:dkey-13a21.4	73	79.310	ENSPREG00000022241	si:dkey-13a21.4	85	79.310	Poecilia_reticulata
ENSKMAG00000021039	si:dkey-13a21.4	74	79.545	ENSPNYG00000018613	si:dkey-13a21.4	85	79.545	Pundamilia_nyererei
ENSKMAG00000021039	si:dkey-13a21.4	74	46.961	YML001W	YPT7	87	46.961	Saccharomyces_cerevisiae
ENSKMAG00000021039	si:dkey-13a21.4	87	56.667	ENSSFOG00015009566	si:dkey-13a21.4	94	56.667	Scleropages_formosus
ENSKMAG00000021039	si:dkey-13a21.4	74	77.528	ENSSMAG00000013945	si:dkey-13a21.4	86	77.528	Scophthalmus_maximus
ENSKMAG00000021039	si:dkey-13a21.4	74	81.250	ENSSDUG00000019738	si:dkey-13a21.4	87	81.250	Seriola_dumerili
ENSKMAG00000021039	si:dkey-13a21.4	74	80.682	ENSSLDG00000011597	si:dkey-13a21.4	86	80.682	Seriola_lalandi_dorsalis
ENSKMAG00000021039	si:dkey-13a21.4	67	61.250	ENSXETG00000014257	mgc75872	80	61.250	Xenopus_tropicalis