EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000021400 (Gene tree)
Gene ID: 108245559
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 14861 bases
Position: chrLWHD01000178.1:758648-773508
Accession: 108245559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000028893	RRM_1	PF00076.22	2.9e-05	1	1
ENSKMAP00000028876	RRM_1	PF00076.22	3.3e-05	1	1
ENSKMAP00000028893	G-patch	PF01585.23	2.9e-13	1	1
ENSKMAP00000028876	G-patch	PF01585.23	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000029239	-	2088	XM_017432584	ENSKMAP00000028876	420 (aa)	XP_017288073	UPI0007F8938A
ENSKMAT00000029256	-	1191	-	ENSKMAP00000028893	396 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000021400's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021400	rbm17	100	79.361	ENSG00000134453	RBM17	100	78.624	Homo_sapiens
ENSKMAG00000021400	rbm17	99	93.525	ENSAPOG00000007101	rbm17	99	93.525	Acanthochromis_polyacanthus
ENSKMAG00000021400	rbm17	100	79.607	ENSAMEG00000002107	RBM17	100	78.870	Ailuropoda_melanoleuca
ENSKMAG00000021400	rbm17	100	89.136	ENSACIG00000006251	rbm17	100	89.136	Amphilophus_citrinellus
ENSKMAG00000021400	rbm17	100	93.349	ENSAOCG00000014892	rbm17	100	93.349	Amphiprion_ocellaris
ENSKMAG00000021400	rbm17	100	93.349	ENSAPEG00000022779	rbm17	100	93.349	Amphiprion_percula
ENSKMAG00000021400	rbm17	100	91.924	ENSATEG00000004406	rbm17	100	91.924	Anabas_testudineus
ENSKMAG00000021400	rbm17	100	80.098	ENSAPLG00000004190	RBM17	100	79.361	Anas_platyrhynchos
ENSKMAG00000021400	rbm17	90	77.062	ENSACAG00000005418	RBM17	99	77.062	Anolis_carolinensis
ENSKMAG00000021400	rbm17	100	71.182	ENSANAG00000019330	-	95	86.207	Aotus_nancymaae
ENSKMAG00000021400	rbm17	100	80.050	ENSANAG00000030127	RBM17	95	89.831	Aotus_nancymaae
ENSKMAG00000021400	rbm17	100	91.436	ENSACLG00000003928	rbm17	100	91.436	Astatotilapia_calliptera
ENSKMAG00000021400	rbm17	100	82.464	ENSAMXG00000005853	rbm17	100	81.754	Astyanax_mexicanus
ENSKMAG00000021400	rbm17	100	78.133	ENSBTAG00000011094	-	100	77.396	Bos_taurus
ENSKMAG00000021400	rbm17	100	79.115	ENSBTAG00000021951	RBM17	100	78.378	Bos_taurus
ENSKMAG00000021400	rbm17	75	33.648	WBGene00010233	F58B3.7	97	30.303	Caenorhabditis_elegans
ENSKMAG00000021400	rbm17	100	79.853	ENSCJAG00000020573	RBM17	100	80.702	Callithrix_jacchus
ENSKMAG00000021400	rbm17	100	79.607	ENSCAFG00000005206	RBM17	100	78.870	Canis_familiaris
ENSKMAG00000021400	rbm17	100	80.905	ENSCAFG00020005420	RBM17	100	80.151	Canis_lupus_dingo
ENSKMAG00000021400	rbm17	100	76.904	ENSCHIG00000019921	-	100	76.167	Capra_hircus
ENSKMAG00000021400	rbm17	100	79.115	ENSCHIG00000023204	-	100	79.397	Capra_hircus
ENSKMAG00000021400	rbm17	100	79.024	ENSTSYG00000001165	RBM17	99	88.983	Carlito_syrichta
ENSKMAG00000021400	rbm17	90	67.403	ENSCAPG00000006275	RBM17	100	68.785	Cavia_aperea
ENSKMAG00000021400	rbm17	100	78.554	ENSCPOG00000005679	RBM17	100	78.079	Cavia_porcellus
ENSKMAG00000021400	rbm17	100	79.853	ENSCCAG00000018655	RBM17	95	89.831	Cebus_capucinus
ENSKMAG00000021400	rbm17	100	79.361	ENSCATG00000041566	RBM17	95	89.831	Cercocebus_atys
ENSKMAG00000021400	rbm17	100	79.009	ENSCLAG00000012195	RBM17	99	78.049	Chinchilla_lanigera
ENSKMAG00000021400	rbm17	100	79.361	ENSCSAG00000013564	RBM17	100	78.624	Chlorocebus_sabaeus
ENSKMAG00000021400	rbm17	93	62.850	ENSCHOG00000005131	RBM17	100	61.968	Choloepus_hoffmanni
ENSKMAG00000021400	rbm17	100	80.098	ENSCPBG00000019836	RBM17	100	79.361	Chrysemys_picta_bellii
ENSKMAG00000021400	rbm17	100	45.667	ENSCSAVG00000008782	-	100	43.326	Ciona_savignyi
ENSKMAG00000021400	rbm17	100	79.115	ENSCANG00000030987	RBM17	95	89.831	Colobus_angolensis_palliatus
ENSKMAG00000021400	rbm17	98	71.220	ENSCANG00000023715	-	99	71.318	Colobus_angolensis_palliatus
ENSKMAG00000021400	rbm17	100	64.286	ENSCGRG00001009256	-	100	61.481	Cricetulus_griseus_chok1gshd
ENSKMAG00000021400	rbm17	100	79.245	ENSCGRG00001013842	Rbm17	100	78.293	Cricetulus_griseus_chok1gshd
ENSKMAG00000021400	rbm17	100	79.245	ENSCGRG00000006907	Rbm17	100	78.293	Cricetulus_griseus_crigri
ENSKMAG00000021400	rbm17	100	85.545	ENSCSEG00000018164	rbm17	100	85.545	Cynoglossus_semilaevis
ENSKMAG00000021400	rbm17	100	88.917	ENSCVAG00000002476	rbm17	100	88.279	Cyprinodon_variegatus
ENSKMAG00000021400	rbm17	100	76.761	ENSDARG00000031346	rbm17	100	78.169	Danio_rerio
ENSKMAG00000021400	rbm17	100	79.361	ENSDNOG00000035920	RBM17	100	78.624	Dasypus_novemcinctus
ENSKMAG00000021400	rbm17	99	37.251	FBgn0086683	Spf45	99	36.607	Drosophila_melanogaster
ENSKMAG00000021400	rbm17	87	84.360	ENSETEG00000006642	RBM17	84	84.360	Echinops_telfairi
ENSKMAG00000021400	rbm17	61	69.048	ENSEBUG00000010253	rbm17	81	69.048	Eptatretus_burgeri
ENSKMAG00000021400	rbm17	100	78.358	ENSEASG00005019205	-	100	78.856	Equus_asinus_asinus
ENSKMAG00000021400	rbm17	92	76.862	ENSEASG00005009236	-	100	76.862	Equus_asinus_asinus
ENSKMAG00000021400	rbm17	100	71.859	ENSECAG00000008939	RBM17	100	72.362	Equus_caballus
ENSKMAG00000021400	rbm17	100	70.762	ENSECAG00000001379	-	100	70.762	Equus_caballus
ENSKMAG00000021400	rbm17	86	62.125	ENSEEUG00000013077	RBM17	100	61.308	Erinaceus_europaeus
ENSKMAG00000021400	rbm17	100	84.382	ENSELUG00000006440	rbm17	100	84.149	Esox_lucius
ENSKMAG00000021400	rbm17	100	79.607	ENSFCAG00000031988	RBM17	100	78.870	Felis_catus
ENSKMAG00000021400	rbm17	100	79.115	ENSFALG00000001790	RBM17	100	78.378	Ficedula_albicollis
ENSKMAG00000021400	rbm17	100	79.009	ENSFDAG00000007470	RBM17	100	78.049	Fukomys_damarensis
ENSKMAG00000021400	rbm17	100	92.399	ENSFHEG00000001266	rbm17	100	91.184	Fundulus_heteroclitus
ENSKMAG00000021400	rbm17	99	79.714	ENSGMOG00000008438	rbm17	100	78.520	Gadus_morhua
ENSKMAG00000021400	rbm17	100	80.590	ENSGALG00000006332	RBM17	100	79.853	Gallus_gallus
ENSKMAG00000021400	rbm17	100	91.184	ENSGAFG00000019879	rbm17	100	91.184	Gambusia_affinis
ENSKMAG00000021400	rbm17	99	89.074	ENSGACG00000019174	rbm17	99	89.074	Gasterosteus_aculeatus
ENSKMAG00000021400	rbm17	100	80.098	ENSGAGG00000019906	RBM17	100	79.361	Gopherus_agassizii
ENSKMAG00000021400	rbm17	100	92.399	ENSHBUG00000016624	rbm17	100	92.399	Haplochromis_burtoni
ENSKMAG00000021400	rbm17	100	79.009	ENSHGLG00000011580	RBM17	100	78.049	Heterocephalus_glaber_female
ENSKMAG00000021400	rbm17	100	66.416	ENSHGLG00100010556	-	100	61.667	Heterocephalus_glaber_male
ENSKMAG00000021400	rbm17	100	79.009	ENSHGLG00100010460	RBM17	100	78.049	Heterocephalus_glaber_male
ENSKMAG00000021400	rbm17	99	88.305	ENSHCOG00000010865	rbm17	100	87.589	Hippocampus_comes
ENSKMAG00000021400	rbm17	100	82.783	ENSIPUG00000007699	Rbm17	100	82.075	Ictalurus_punctatus
ENSKMAG00000021400	rbm17	100	79.245	ENSSTOG00000013591	RBM17	100	78.293	Ictidomys_tridecemlineatus
ENSKMAG00000021400	rbm17	100	58.255	ENSJJAG00000000993	-	100	57.783	Jaculus_jaculus
ENSKMAG00000021400	rbm17	100	79.245	ENSJJAG00000022886	Rbm17	100	78.293	Jaculus_jaculus
ENSKMAG00000021400	rbm17	100	89.549	ENSLBEG00000000881	rbm17	100	89.549	Labrus_bergylta
ENSKMAG00000021400	rbm17	99	65.654	ENSLACG00000017297	RBM17	99	65.187	Latimeria_chalumnae
ENSKMAG00000021400	rbm17	100	81.863	ENSLOCG00000015659	rbm17	100	80.882	Lepisosteus_oculatus
ENSKMAG00000021400	rbm17	100	79.481	ENSLAFG00000011629	RBM17	100	78.155	Loxodonta_africana
ENSKMAG00000021400	rbm17	100	79.361	ENSMFAG00000035521	RBM17	95	89.831	Macaca_fascicularis
ENSKMAG00000021400	rbm17	100	79.361	ENSMMUG00000015152	RBM17	95	89.831	Macaca_mulatta
ENSKMAG00000021400	rbm17	100	79.361	ENSMNEG00000017264	RBM17	95	89.831	Macaca_nemestrina
ENSKMAG00000021400	rbm17	100	79.361	ENSMLEG00000029340	RBM17	95	89.831	Mandrillus_leucophaeus
ENSKMAG00000021400	rbm17	100	91.211	ENSMAMG00000000387	rbm17	100	91.211	Mastacembelus_armatus
ENSKMAG00000021400	rbm17	100	92.399	ENSMZEG00005015179	rbm17	100	92.399	Maylandia_zebra
ENSKMAG00000021400	rbm17	100	79.577	ENSMGAG00000003981	RBM17	100	78.692	Meleagris_gallopavo
ENSKMAG00000021400	rbm17	100	79.245	ENSMAUG00000019247	Rbm17	100	78.293	Mesocricetus_auratus
ENSKMAG00000021400	rbm17	100	73.882	ENSMICG00000041489	-	100	72.941	Microcebus_murinus
ENSKMAG00000021400	rbm17	100	79.104	ENSMICG00000003976	-	100	79.653	Microcebus_murinus
ENSKMAG00000021400	rbm17	92	66.038	ENSMOCG00000014517	-	99	66.038	Microtus_ochrogaster
ENSKMAG00000021400	rbm17	100	79.245	ENSMOCG00000011847	Rbm17	100	78.293	Microtus_ochrogaster
ENSKMAG00000021400	rbm17	100	83.130	ENSMMOG00000010264	rbm17	100	83.130	Mola_mola
ENSKMAG00000021400	rbm17	100	79.853	ENSMODG00000016648	RBM17	100	79.115	Monodelphis_domestica
ENSKMAG00000021400	rbm17	100	89.810	ENSMALG00000010597	rbm17	100	90.995	Monopterus_albus
ENSKMAG00000021400	rbm17	100	79.481	MGP_CAROLIEiJ_G0023173	Rbm17	100	78.293	Mus_caroli
ENSKMAG00000021400	rbm17	100	79.481	ENSMUSG00000037197	Rbm17	100	78.293	Mus_musculus
ENSKMAG00000021400	rbm17	100	79.481	MGP_PahariEiJ_G0019233	Rbm17	100	78.537	Mus_pahari
ENSKMAG00000021400	rbm17	100	79.481	MGP_SPRETEiJ_G0024091	Rbm17	100	78.293	Mus_spretus
ENSKMAG00000021400	rbm17	86	77.429	ENSMPUG00000016359	RBM17	96	76.571	Mustela_putorius_furo
ENSKMAG00000021400	rbm17	100	77.412	ENSMLUG00000002302	-	100	76.399	Myotis_lucifugus
ENSKMAG00000021400	rbm17	100	74.693	ENSMLUG00000025709	-	100	74.201	Myotis_lucifugus
ENSKMAG00000021400	rbm17	100	57.286	ENSNGAG00000000663	-	95	76.404	Nannospalax_galili
ENSKMAG00000021400	rbm17	100	79.245	ENSNGAG00000000741	Rbm17	100	78.293	Nannospalax_galili
ENSKMAG00000021400	rbm17	100	88.413	ENSNBRG00000018148	rbm17	100	88.413	Neolamprologus_brichardi
ENSKMAG00000021400	rbm17	100	79.361	ENSNLEG00000033350	RBM17	95	89.831	Nomascus_leucogenys
ENSKMAG00000021400	rbm17	100	74.447	ENSMEUG00000011347	RBM17	100	73.710	Notamacropus_eugenii
ENSKMAG00000021400	rbm17	100	68.719	ENSOPRG00000002993	RBM17	100	67.453	Ochotona_princeps
ENSKMAG00000021400	rbm17	97	61.240	ENSODEG00000007286	-	99	59.897	Octodon_degus
ENSKMAG00000021400	rbm17	100	79.059	ENSODEG00000004393	RBM17	100	77.859	Octodon_degus
ENSKMAG00000021400	rbm17	100	89.549	ENSONIG00000011838	rbm17	100	89.549	Oreochromis_niloticus
ENSKMAG00000021400	rbm17	100	78.922	ENSOANG00000015455	RBM17	100	78.676	Ornithorhynchus_anatinus
ENSKMAG00000021400	rbm17	100	90.736	ENSORLG00000028798	rbm17	100	90.736	Oryzias_latipes
ENSKMAG00000021400	rbm17	100	90.974	ENSORLG00020004593	rbm17	100	89.673	Oryzias_latipes_hni
ENSKMAG00000021400	rbm17	100	90.974	ENSORLG00015000033	rbm17	99	90.974	Oryzias_latipes_hsok
ENSKMAG00000021400	rbm17	100	91.211	ENSOMEG00000012060	rbm17	100	91.875	Oryzias_melastigma
ENSKMAG00000021400	rbm17	100	79.268	ENSOGAG00000015687	RBM17	100	78.538	Otolemur_garnettii
ENSKMAG00000021400	rbm17	100	79.115	ENSOARG00000012975	RBM17	100	78.378	Ovis_aries
ENSKMAG00000021400	rbm17	100	79.361	ENSPPAG00000032347	RBM17	95	89.831	Pan_paniscus
ENSKMAG00000021400	rbm17	100	79.607	ENSPPRG00000010706	RBM17	100	78.870	Panthera_pardus
ENSKMAG00000021400	rbm17	100	79.607	ENSPTIG00000007596	RBM17	100	78.870	Panthera_tigris_altaica
ENSKMAG00000021400	rbm17	100	79.361	ENSPTRG00000002265	RBM17	95	89.831	Pan_troglodytes
ENSKMAG00000021400	rbm17	100	79.361	ENSPANG00000023425	RBM17	95	89.831	Papio_anubis
ENSKMAG00000021400	rbm17	100	77.136	ENSPKIG00000005048	-	100	77.136	Paramormyrops_kingsleyae
ENSKMAG00000021400	rbm17	100	80.094	ENSPKIG00000025526	rbm17	100	78.454	Paramormyrops_kingsleyae
ENSKMAG00000021400	rbm17	100	78.454	ENSPSIG00000012332	RBM17	100	78.049	Pelodiscus_sinensis
ENSKMAG00000021400	rbm17	100	86.500	ENSPMGG00000007980	rbm17	100	86.500	Periophthalmus_magnuspinnatus
ENSKMAG00000021400	rbm17	100	79.245	ENSPEMG00000014320	Rbm17	100	78.293	Peromyscus_maniculatus_bairdii
ENSKMAG00000021400	rbm17	100	79.462	ENSPCIG00000019260	-	100	78.729	Phascolarctos_cinereus
ENSKMAG00000021400	rbm17	100	92.399	ENSPFOG00000013271	rbm17	100	92.399	Poecilia_formosa
ENSKMAG00000021400	rbm17	100	91.924	ENSPLAG00000004455	rbm17	100	91.924	Poecilia_latipinna
ENSKMAG00000021400	rbm17	100	92.399	ENSPMEG00000014864	rbm17	100	92.399	Poecilia_mexicana
ENSKMAG00000021400	rbm17	100	92.637	ENSPREG00000015589	rbm17	100	92.637	Poecilia_reticulata
ENSKMAG00000021400	rbm17	100	79.361	ENSPPYG00000002067	RBM17	100	78.624	Pongo_abelii
ENSKMAG00000021400	rbm17	99	59.953	ENSPPYG00000019881	-	100	59.242	Pongo_abelii
ENSKMAG00000021400	rbm17	81	56.522	ENSPPYG00000019042	-	100	56.615	Pongo_abelii
ENSKMAG00000021400	rbm17	100	72.482	ENSPCAG00000016879	RBM17	100	71.744	Procavia_capensis
ENSKMAG00000021400	rbm17	100	79.648	ENSPCOG00000027881	RBM17	100	80.402	Propithecus_coquereli
ENSKMAG00000021400	rbm17	100	70.660	ENSPVAG00000015499	RBM17	100	69.927	Pteropus_vampyrus
ENSKMAG00000021400	rbm17	100	83.123	ENSPNYG00000015274	rbm17	100	83.375	Pundamilia_nyererei
ENSKMAG00000021400	rbm17	100	82.701	ENSPNAG00000030046	rbm17	100	82.620	Pygocentrus_nattereri
ENSKMAG00000021400	rbm17	100	79.245	ENSRNOG00000018767	Rbm17	100	78.293	Rattus_norvegicus
ENSKMAG00000021400	rbm17	100	79.361	ENSRBIG00000043727	RBM17	95	89.831	Rhinopithecus_bieti
ENSKMAG00000021400	rbm17	100	79.361	ENSRROG00000044142	RBM17	95	89.831	Rhinopithecus_roxellana
ENSKMAG00000021400	rbm17	100	70.824	ENSSBOG00000023653	-	100	66.505	Saimiri_boliviensis_boliviensis
ENSKMAG00000021400	rbm17	100	80.402	ENSSBOG00000031661	-	93	90.435	Saimiri_boliviensis_boliviensis
ENSKMAG00000021400	rbm17	100	79.953	ENSSHAG00000012480	-	100	79.115	Sarcophilus_harrisii
ENSKMAG00000021400	rbm17	100	79.059	ENSSFOG00015009892	rbm17	100	79.059	Scleropages_formosus
ENSKMAG00000021400	rbm17	100	87.909	ENSSMAG00000012368	rbm17	100	87.657	Scophthalmus_maximus
ENSKMAG00000021400	rbm17	100	89.394	ENSSDUG00000015015	rbm17	100	90.680	Seriola_dumerili
ENSKMAG00000021400	rbm17	100	89.394	ENSSLDG00000014486	rbm17	100	90.680	Seriola_lalandi_dorsalis
ENSKMAG00000021400	rbm17	50	77.273	ENSSARG00000001792	-	79	77.273	Sorex_araneus
ENSKMAG00000021400	rbm17	99	80.542	ENSSPUG00000001036	RBM17	99	79.803	Sphenodon_punctatus
ENSKMAG00000021400	rbm17	100	94.299	ENSSPAG00000002338	rbm17	100	94.299	Stegastes_partitus
ENSKMAG00000021400	rbm17	100	79.115	ENSSSCG00000011134	RBM17	100	78.378	Sus_scrofa
ENSKMAG00000021400	rbm17	100	79.009	ENSTGUG00000002013	RBM17	100	78.302	Taeniopygia_guttata
ENSKMAG00000021400	rbm17	100	88.836	ENSTRUG00000010698	rbm17	100	88.361	Takifugu_rubripes
ENSKMAG00000021400	rbm17	100	87.886	ENSTNIG00000006892	rbm17	100	87.411	Tetraodon_nigroviridis
ENSKMAG00000021400	rbm17	100	63.457	ENSTBEG00000014686	RBM17	100	63.457	Tupaia_belangeri
ENSKMAG00000021400	rbm17	90	77.869	ENSTTRG00000001344	RBM17	100	77.869	Tursiops_truncatus
ENSKMAG00000021400	rbm17	100	80.905	ENSUAMG00000009499	RBM17	100	80.151	Ursus_americanus
ENSKMAG00000021400	rbm17	100	79.607	ENSUMAG00000012237	RBM17	100	79.899	Ursus_maritimus
ENSKMAG00000021400	rbm17	100	67.689	ENSVPAG00000005497	RBM17	84	85.156	Vicugna_pacos
ENSKMAG00000021400	rbm17	100	80.905	ENSVVUG00000006780	RBM17	100	80.151	Vulpes_vulpes
ENSKMAG00000021400	rbm17	99	75.990	ENSXETG00000018123	rbm17	100	75.495	Xenopus_tropicalis
ENSKMAG00000021400	rbm17	100	92.162	ENSXMAG00000008674	rbm17	100	92.162	Xiphophorus_maculatus