EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000021674 (Gene tree)
Gene ID: 108243854
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 26508 bases
Position: chrLWHD01000125.1:657986-684493
Accession: 108243854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000029262	La	PF05383.17	1.1e-13	1	1
ENSKMAP00000029254	La	PF05383.17	1.2e-13	1	1
ENSKMAP00000029269	La	PF05383.17	1.3e-13	1	1
ENSKMAP00000029284	La	PF05383.17	2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000029619	LARP4B-201	2877	XM_017429563	ENSKMAP00000029254	766 (aa)	XP_017285052	UPI0007F9373B
ENSKMAT00000029635	LARP4B-203	2654	-	ENSKMAP00000029269	791 (aa)	-	UPI0007F8712D
ENSKMAT00000029628	LARP4B-202	2703	XM_017429565	ENSKMAP00000029262	708 (aa)	XP_017285054	UPI0007F8DCF7
ENSKMAT00000029650	LARP4B-204	1839	-	ENSKMAP00000029284	612 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000021674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000021674	LARP4B	84	37.428	ENSKMAG00000018556	larp4ab	87	36.738
ENSKMAG00000021674	LARP4B	74	42.342	ENSKMAG00000006800	larp4aa	76	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021674	LARP4B	100	57.125	ENSG00000107929	LARP4B	100	56.250	Homo_sapiens
ENSKMAG00000021674	LARP4B	100	76.438	ENSAPOG00000020531	LARP4B	94	89.247	Acanthochromis_polyacanthus
ENSKMAG00000021674	LARP4B	95	57.333	ENSAMEG00000001810	LARP4B	100	54.442	Ailuropoda_melanoleuca
ENSKMAG00000021674	LARP4B	96	76.151	ENSAOCG00000007887	-	99	89.964	Amphiprion_ocellaris
ENSKMAG00000021674	LARP4B	92	87.306	ENSAPEG00000002512	LARP4B	96	84.906	Amphiprion_percula
ENSKMAG00000021674	LARP4B	100	86.118	ENSATEG00000012614	LARP4B	100	86.118	Anabas_testudineus
ENSKMAG00000021674	LARP4B	100	59.627	ENSAPLG00000003813	LARP4B	98	58.663	Anas_platyrhynchos
ENSKMAG00000021674	LARP4B	100	60.255	ENSACAG00000002858	LARP4B	100	59.264	Anolis_carolinensis
ENSKMAG00000021674	LARP4B	100	57.125	ENSANAG00000007531	-	100	56.250	Aotus_nancymaae
ENSKMAG00000021674	LARP4B	100	88.966	ENSACLG00000026356	LARP4B	100	88.966	Astatotilapia_calliptera
ENSKMAG00000021674	LARP4B	94	53.406	ENSAMXG00000003335	larp4b	97	52.925	Astyanax_mexicanus
ENSKMAG00000021674	LARP4B	97	58.847	ENSBTAG00000013899	LARP4B	97	58.233	Bos_taurus
ENSKMAG00000021674	LARP4B	100	56.875	ENSCJAG00000018434	LARP4B	100	55.890	Callithrix_jacchus
ENSKMAG00000021674	LARP4B	95	57.926	ENSCAFG00020004209	LARP4B	100	55.000	Canis_lupus_dingo
ENSKMAG00000021674	LARP4B	100	55.985	ENSCHIG00000013543	LARP4B	100	55.273	Capra_hircus
ENSKMAG00000021674	LARP4B	86	64.956	ENSTSYG00000002568	LARP4B	100	61.059	Carlito_syrichta
ENSKMAG00000021674	LARP4B	90	58.418	ENSCAPG00000009725	LARP4B	85	55.322	Cavia_aperea
ENSKMAG00000021674	LARP4B	100	56.571	ENSCPOG00000009375	LARP4B	100	55.820	Cavia_porcellus
ENSKMAG00000021674	LARP4B	100	56.875	ENSCCAG00000024869	LARP4B	100	56.000	Cebus_capucinus
ENSKMAG00000021674	LARP4B	100	57.250	ENSCATG00000019750	LARP4B	100	56.375	Cercocebus_atys
ENSKMAG00000021674	LARP4B	100	57.692	ENSCLAG00000011570	LARP4B	100	57.179	Chinchilla_lanigera
ENSKMAG00000021674	LARP4B	67	75.758	ENSCHOG00000007831	-	58	75.758	Choloepus_hoffmanni
ENSKMAG00000021674	LARP4B	100	60.358	ENSCPBG00000017063	LARP4B	100	60.102	Chrysemys_picta_bellii
ENSKMAG00000021674	LARP4B	100	55.375	ENSCANG00000038021	LARP4B	100	54.500	Colobus_angolensis_palliatus
ENSKMAG00000021674	LARP4B	100	57.036	ENSCGRG00001022930	Larp4b	100	62.847	Cricetulus_griseus_chok1gshd
ENSKMAG00000021674	LARP4B	100	57.036	ENSCGRG00000006022	Larp4b	100	62.847	Cricetulus_griseus_crigri
ENSKMAG00000021674	LARP4B	100	73.677	ENSCSEG00000007342	LARP4B	100	73.677	Cynoglossus_semilaevis
ENSKMAG00000021674	LARP4B	100	86.761	ENSCVAG00000008910	LARP4B	100	86.198	Cyprinodon_variegatus
ENSKMAG00000021674	LARP4B	94	53.342	ENSDARG00000062146	larp4b	98	53.012	Danio_rerio
ENSKMAG00000021674	LARP4B	96	56.933	ENSDNOG00000045543	-	100	63.830	Dasypus_novemcinctus
ENSKMAG00000021674	LARP4B	100	54.000	ENSDORG00000009328	Larp4b	100	59.898	Dipodomys_ordii
ENSKMAG00000021674	LARP4B	88	58.640	ENSETEG00000011249	LARP4B	90	58.640	Echinops_telfairi
ENSKMAG00000021674	LARP4B	94	57.635	ENSEASG00005019068	-	100	55.375	Equus_asinus_asinus
ENSKMAG00000021674	LARP4B	94	57.784	ENSECAG00000024040	LARP4B	100	55.486	Equus_caballus
ENSKMAG00000021674	LARP4B	87	64.035	ENSEEUG00000008391	LARP4B	98	53.789	Erinaceus_europaeus
ENSKMAG00000021674	LARP4B	87	43.345	ENSELUG00000001417	-	94	42.835	Esox_lucius
ENSKMAG00000021674	LARP4B	97	72.157	ENSELUG00000008626	LARP4B	100	70.996	Esox_lucius
ENSKMAG00000021674	LARP4B	97	56.170	ENSFCAG00000000721	-	100	55.750	Felis_catus
ENSKMAG00000021674	LARP4B	100	60.920	ENSFALG00000006961	LARP4B	100	60.129	Ficedula_albicollis
ENSKMAG00000021674	LARP4B	100	56.642	ENSFDAG00000006158	LARP4B	97	55.764	Fukomys_damarensis
ENSKMAG00000021674	LARP4B	100	68.668	ENSFHEG00000013037	LARP4B	100	68.668	Fundulus_heteroclitus
ENSKMAG00000021674	LARP4B	89	61.613	ENSGMOG00000010818	-	100	61.613	Gadus_morhua
ENSKMAG00000021674	LARP4B	100	59.898	ENSGALG00000006672	LARP4B	100	59.466	Gallus_gallus
ENSKMAG00000021674	LARP4B	100	73.457	ENSGACG00000017535	LARP4B	98	73.580	Gasterosteus_aculeatus
ENSKMAG00000021674	LARP4B	90	63.696	ENSGAGG00000008598	LARP4B	100	57.987	Gopherus_agassizii
ENSKMAG00000021674	LARP4B	100	57.000	ENSGGOG00000003572	LARP4B	100	56.125	Gorilla_gorilla
ENSKMAG00000021674	LARP4B	100	89.986	ENSHBUG00000007535	LARP4B	100	89.986	Haplochromis_burtoni
ENSKMAG00000021674	LARP4B	100	56.875	ENSHGLG00000012936	LARP4B	100	63.452	Heterocephalus_glaber_female
ENSKMAG00000021674	LARP4B	84	53.752	ENSHGLG00100017261	-	100	51.227	Heterocephalus_glaber_male
ENSKMAG00000021674	LARP4B	100	56.892	ENSHGLG00100016220	-	100	56.391	Heterocephalus_glaber_male
ENSKMAG00000021674	LARP4B	96	72.038	ENSHCOG00000011581	LARP4B	88	91.071	Hippocampus_comes
ENSKMAG00000021674	LARP4B	94	51.037	ENSIPUG00000009705	larp4b	97	52.215	Ictalurus_punctatus
ENSKMAG00000021674	LARP4B	97	59.163	ENSSTOG00000000587	LARP4B	94	66.310	Ictidomys_tridecemlineatus
ENSKMAG00000021674	LARP4B	100	56.733	ENSJJAG00000020847	Larp4b	100	56.538	Jaculus_jaculus
ENSKMAG00000021674	LARP4B	76	90.972	ENSLBEG00000025293	-	82	90.051	Labrus_bergylta
ENSKMAG00000021674	LARP4B	96	61.669	ENSLACG00000009492	LARP4B	100	60.218	Latimeria_chalumnae
ENSKMAG00000021674	LARP4B	100	65.517	ENSLOCG00000012290	larp4b	100	65.776	Lepisosteus_oculatus
ENSKMAG00000021674	LARP4B	100	56.366	ENSLAFG00000015334	LARP4B	100	55.303	Loxodonta_africana
ENSKMAG00000021674	LARP4B	100	57.250	ENSMFAG00000001766	LARP4B	100	54.500	Macaca_fascicularis
ENSKMAG00000021674	LARP4B	100	57.250	ENSMMUG00000005279	LARP4B	100	56.375	Macaca_mulatta
ENSKMAG00000021674	LARP4B	100	57.125	ENSMNEG00000014019	LARP4B	100	54.375	Macaca_nemestrina
ENSKMAG00000021674	LARP4B	100	57.179	ENSMLEG00000035198	LARP4B	100	56.305	Mandrillus_leucophaeus
ENSKMAG00000021674	LARP4B	100	86.287	ENSMAMG00000013742	LARP4B	100	85.770	Mastacembelus_armatus
ENSKMAG00000021674	LARP4B	100	76.184	ENSMZEG00005006498	-	95	92.655	Maylandia_zebra
ENSKMAG00000021674	LARP4B	94	88.920	ENSMZEG00005014594	-	100	88.920	Maylandia_zebra
ENSKMAG00000021674	LARP4B	100	57.285	ENSMGAG00000005472	LARP4B	100	57.285	Meleagris_gallopavo
ENSKMAG00000021674	LARP4B	100	57.036	ENSMAUG00000021657	Larp4b	100	63.406	Mesocricetus_auratus
ENSKMAG00000021674	LARP4B	100	56.878	ENSMICG00000001301	LARP4B	100	56.614	Microcebus_murinus
ENSKMAG00000021674	LARP4B	97	55.294	ENSMOCG00000021452	Larp4b	100	62.732	Microtus_ochrogaster
ENSKMAG00000021674	LARP4B	86	93.103	ENSMMOG00000011253	-	100	72.778	Mola_mola
ENSKMAG00000021674	LARP4B	100	57.557	ENSMODG00000005957	LARP4B	100	57.233	Monodelphis_domestica
ENSKMAG00000021674	LARP4B	100	70.056	ENSMALG00000012432	LARP4B	100	70.240	Monopterus_albus
ENSKMAG00000021674	LARP4B	100	57.179	MGP_CAROLIEiJ_G0018216	Larp4b	100	61.935	Mus_caroli
ENSKMAG00000021674	LARP4B	100	57.783	ENSMUSG00000033499	Larp4b	100	61.148	Mus_musculus
ENSKMAG00000021674	LARP4B	100	57.731	MGP_PahariEiJ_G0019266	Larp4b	100	62.988	Mus_pahari
ENSKMAG00000021674	LARP4B	100	57.659	MGP_SPRETEiJ_G0019074	Larp4b	100	61.311	Mus_spretus
ENSKMAG00000021674	LARP4B	97	55.492	ENSMPUG00000016220	LARP4B	97	55.125	Mustela_putorius_furo
ENSKMAG00000021674	LARP4B	91	59.341	ENSMLUG00000005880	LARP4B	99	56.914	Myotis_lucifugus
ENSKMAG00000021674	LARP4B	100	57.054	ENSNGAG00000001750	Larp4b	100	56.679	Nannospalax_galili
ENSKMAG00000021674	LARP4B	100	69.081	ENSNBRG00000020018	LARP4B	97	72.387	Neolamprologus_brichardi
ENSKMAG00000021674	LARP4B	100	57.000	ENSNLEG00000013442	LARP4B	100	56.125	Nomascus_leucogenys
ENSKMAG00000021674	LARP4B	73	76.250	ENSMEUG00000013114	-	66	76.250	Notamacropus_eugenii
ENSKMAG00000021674	LARP4B	100	54.534	ENSOPRG00000003300	LARP4B	100	53.408	Ochotona_princeps
ENSKMAG00000021674	LARP4B	100	52.941	ENSODEG00000001109	LARP4B	100	58.574	Octodon_degus
ENSKMAG00000021674	LARP4B	100	88.372	ENSONIG00000017705	LARP4B	100	88.372	Oreochromis_niloticus
ENSKMAG00000021674	LARP4B	100	56.704	ENSOANG00000006100	LARP4B	100	56.442	Ornithorhynchus_anatinus
ENSKMAG00000021674	LARP4B	100	54.678	ENSOCUG00000004950	LARP4B	97	54.070	Oryctolagus_cuniculus
ENSKMAG00000021674	LARP4B	100	84.505	ENSORLG00000006080	LARP4B	100	83.854	Oryzias_latipes
ENSKMAG00000021674	LARP4B	100	84.951	ENSORLG00020020940	LARP4B	100	84.265	Oryzias_latipes_hni
ENSKMAG00000021674	LARP4B	100	84.485	ENSORLG00015020608	LARP4B	100	83.780	Oryzias_latipes_hsok
ENSKMAG00000021674	LARP4B	100	84.062	ENSOMEG00000019619	LARP4B	100	83.357	Oryzias_melastigma
ENSKMAG00000021674	LARP4B	96	55.983	ENSOGAG00000011540	LARP4B	99	55.698	Otolemur_garnettii
ENSKMAG00000021674	LARP4B	97	56.433	ENSOARG00000015320	LARP4B	96	55.714	Ovis_aries
ENSKMAG00000021674	LARP4B	100	57.250	ENSPPAG00000039232	LARP4B	100	56.375	Pan_paniscus
ENSKMAG00000021674	LARP4B	97	56.472	ENSPPRG00000009489	LARP4B	100	55.625	Panthera_pardus
ENSKMAG00000021674	LARP4B	97	56.472	ENSPTIG00000008543	LARP4B	100	55.625	Panthera_tigris_altaica
ENSKMAG00000021674	LARP4B	100	57.250	ENSPTRG00000002235	LARP4B	100	56.375	Pan_troglodytes
ENSKMAG00000021674	LARP4B	100	57.250	ENSPANG00000023546	LARP4B	100	54.500	Papio_anubis
ENSKMAG00000021674	LARP4B	98	60.392	ENSPKIG00000012368	LARP4B	96	60.686	Paramormyrops_kingsleyae
ENSKMAG00000021674	LARP4B	74	71.519	ENSPSIG00000005600	LARP4B	99	69.459	Pelodiscus_sinensis
ENSKMAG00000021674	LARP4B	95	67.305	ENSPMGG00000008261	LARP4B	87	73.945	Periophthalmus_magnuspinnatus
ENSKMAG00000021674	LARP4B	100	56.625	ENSPEMG00000014052	Larp4b	100	55.750	Peromyscus_maniculatus_bairdii
ENSKMAG00000021674	LARP4B	100	84.645	ENSPFOG00000000029	LARP4B	100	84.258	Poecilia_formosa
ENSKMAG00000021674	LARP4B	100	85.032	ENSPLAG00000002871	LARP4B	100	84.903	Poecilia_latipinna
ENSKMAG00000021674	LARP4B	100	84.407	ENSPMEG00000016361	LARP4B	100	84.021	Poecilia_mexicana
ENSKMAG00000021674	LARP4B	100	56.554	ENSPPYG00000002035	LARP4B	97	55.431	Pongo_abelii
ENSKMAG00000021674	LARP4B	100	54.956	ENSPCOG00000014688	LARP4B	100	54.705	Propithecus_coquereli
ENSKMAG00000021674	LARP4B	90	57.214	ENSPVAG00000009784	LARP4B	83	57.450	Pteropus_vampyrus
ENSKMAG00000021674	LARP4B	100	89.106	ENSPNYG00000024252	LARP4B	100	89.106	Pundamilia_nyererei
ENSKMAG00000021674	LARP4B	95	51.724	ENSPNAG00000028956	larp4b	99	51.596	Pygocentrus_nattereri
ENSKMAG00000021674	LARP4B	99	56.571	ENSRNOG00000015888	Larp4b	100	55.654	Rattus_norvegicus
ENSKMAG00000021674	LARP4B	100	57.125	ENSRBIG00000033294	LARP4B	100	56.250	Rhinopithecus_bieti
ENSKMAG00000021674	LARP4B	100	57.250	ENSRROG00000033879	LARP4B	100	56.375	Rhinopithecus_roxellana
ENSKMAG00000021674	LARP4B	100	52.130	ENSSBOG00000021109	LARP4B	100	51.403	Saimiri_boliviensis_boliviensis
ENSKMAG00000021674	LARP4B	100	58.801	ENSSHAG00000013392	LARP4B	100	58.291	Sarcophilus_harrisii
ENSKMAG00000021674	LARP4B	92	66.545	ENSSFOG00015003256	LARP4B	93	59.975	Scleropages_formosus
ENSKMAG00000021674	LARP4B	83	96.296	ENSSMAG00000005982	-	99	96.296	Scophthalmus_maximus
ENSKMAG00000021674	LARP4B	100	90.495	ENSSDUG00000006704	LARP4B	100	90.495	Seriola_dumerili
ENSKMAG00000021674	LARP4B	100	77.298	ENSSLDG00000020660	LARP4B	97	81.903	Seriola_lalandi_dorsalis
ENSKMAG00000021674	LARP4B	71	85.047	ENSSARG00000001243	-	79	85.047	Sorex_araneus
ENSKMAG00000021674	LARP4B	100	63.900	ENSSPUG00000002102	-	100	63.674	Sphenodon_punctatus
ENSKMAG00000021674	LARP4B	100	60.304	ENSSPUG00000013734	-	100	63.091	Sphenodon_punctatus
ENSKMAG00000021674	LARP4B	87	89.655	ENSSPAG00000014628	LARP4B	92	89.655	Stegastes_partitus
ENSKMAG00000021674	LARP4B	100	56.250	ENSSSCG00000011162	LARP4B	97	61.616	Sus_scrofa
ENSKMAG00000021674	LARP4B	100	59.747	ENSTGUG00000000811	-	100	59.010	Taeniopygia_guttata
ENSKMAG00000021674	LARP4B	99	67.640	ENSTNIG00000007991	LARP4B	100	73.574	Tetraodon_nigroviridis
ENSKMAG00000021674	LARP4B	100	69.554	ENSTNIG00000004571	-	98	69.936	Tetraodon_nigroviridis
ENSKMAG00000021674	LARP4B	80	62.609	ENSTTRG00000011151	LARP4B	82	61.829	Tursiops_truncatus
ENSKMAG00000021674	LARP4B	86	58.046	ENSUAMG00000016461	LARP4B	95	57.598	Ursus_americanus
ENSKMAG00000021674	LARP4B	97	56.170	ENSUMAG00000016127	LARP4B	100	54.931	Ursus_maritimus
ENSKMAG00000021674	LARP4B	55	85.955	ENSVPAG00000000128	-	64	87.079	Vicugna_pacos
ENSKMAG00000021674	LARP4B	95	57.926	ENSVVUG00000008641	LARP4B	100	55.500	Vulpes_vulpes
ENSKMAG00000021674	LARP4B	99	59.667	ENSXETG00000016882	larp4b	100	59.796	Xenopus_tropicalis
ENSKMAG00000021674	LARP4B	100	70.385	ENSXCOG00000019952	LARP4B	100	69.974	Xiphophorus_couchianus
ENSKMAG00000021674	LARP4B	100	83.829	ENSXMAG00000021533	LARP4B	100	83.182	Xiphophorus_maculatus