EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000021764 (Gene tree)
Gene ID: 108250372
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 6814 bases
Position: chrLWHD01000006.1:30511-37324
Accession: 108250372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000029380	ResIII	PF04851.15	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000029746	-	2678	XM_017440231	ENSKMAP00000029380	783 (aa)	XP_017295720	UPI0007F8647A

Gene Model

Click here to download ENSKMAG00000021764's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03022	Basal transcription factors	KEGG
kmr03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021764	ercc3	100	88.168	ENSG00000163161	ERCC3	99	96.273	Homo_sapiens
ENSKMAG00000021764	ercc3	100	95.147	ENSAPOG00000014383	ercc3	100	95.147	Acanthochromis_polyacanthus
ENSKMAG00000021764	ercc3	100	87.659	ENSAMEG00000016840	ERCC3	100	88.041	Ailuropoda_melanoleuca
ENSKMAG00000021764	ercc3	99	93.677	ENSACIG00000000126	ercc3	100	93.677	Amphilophus_citrinellus
ENSKMAG00000021764	ercc3	100	95.019	ENSAOCG00000009396	ercc3	100	95.019	Amphiprion_ocellaris
ENSKMAG00000021764	ercc3	100	95.019	ENSAPEG00000023077	ercc3	100	95.019	Amphiprion_percula
ENSKMAG00000021764	ercc3	100	94.636	ENSATEG00000014860	ercc3	100	94.636	Anabas_testudineus
ENSKMAG00000021764	ercc3	91	88.748	ENSAPLG00000012068	ERCC3	98	88.748	Anas_platyrhynchos
ENSKMAG00000021764	ercc3	92	89.889	ENSACAG00000009919	ERCC3	100	89.889	Anolis_carolinensis
ENSKMAG00000021764	ercc3	100	88.041	ENSANAG00000031091	ERCC3	100	88.041	Aotus_nancymaae
ENSKMAG00000021764	ercc3	100	94.125	ENSACLG00000022508	ercc3	100	94.125	Astatotilapia_calliptera
ENSKMAG00000021764	ercc3	100	92.082	ENSAMXG00000036947	ercc3	100	92.082	Astyanax_mexicanus
ENSKMAG00000021764	ercc3	100	87.786	ENSBTAG00000020777	ERCC3	100	87.786	Bos_taurus
ENSKMAG00000021764	ercc3	99	62.172	WBGene00013441	xpb-1	99	62.453	Caenorhabditis_elegans
ENSKMAG00000021764	ercc3	100	88.168	ENSCJAG00000010416	ERCC3	100	88.168	Callithrix_jacchus
ENSKMAG00000021764	ercc3	96	89.153	ENSCAFG00000004497	ERCC3	100	87.389	Canis_familiaris
ENSKMAG00000021764	ercc3	96	89.153	ENSCAFG00020003495	ERCC3	100	87.389	Canis_lupus_dingo
ENSKMAG00000021764	ercc3	100	87.786	ENSCHIG00000014551	ERCC3	100	87.786	Capra_hircus
ENSKMAG00000021764	ercc3	99	87.387	ENSTSYG00000004137	ERCC3	99	87.387	Carlito_syrichta
ENSKMAG00000021764	ercc3	78	80.456	ENSCAPG00000017027	ERCC3	93	80.456	Cavia_aperea
ENSKMAG00000021764	ercc3	100	86.514	ENSCPOG00000002144	ERCC3	100	87.150	Cavia_porcellus
ENSKMAG00000021764	ercc3	100	88.168	ENSCCAG00000024421	ERCC3	100	88.168	Cebus_capucinus
ENSKMAG00000021764	ercc3	100	88.168	ENSCATG00000032313	ERCC3	100	88.168	Cercocebus_atys
ENSKMAG00000021764	ercc3	100	86.768	ENSCLAG00000002965	ERCC3	96	87.532	Chinchilla_lanigera
ENSKMAG00000021764	ercc3	100	88.041	ENSCSAG00000016827	ERCC3	100	88.041	Chlorocebus_sabaeus
ENSKMAG00000021764	ercc3	83	94.737	ENSCHOG00000007414	ERCC3	83	94.737	Choloepus_hoffmanni
ENSKMAG00000021764	ercc3	92	89.751	ENSCPBG00000013638	ERCC3	100	89.751	Chrysemys_picta_bellii
ENSKMAG00000021764	ercc3	96	71.279	ENSCING00000002867	ercc3	96	71.279	Ciona_intestinalis
ENSKMAG00000021764	ercc3	100	88.168	ENSCANG00000007094	ERCC3	100	88.168	Colobus_angolensis_palliatus
ENSKMAG00000021764	ercc3	100	87.786	ENSCGRG00001009426	Ercc3	100	88.295	Cricetulus_griseus_chok1gshd
ENSKMAG00000021764	ercc3	97	87.533	ENSCGRG00000015547	Ercc3	100	88.058	Cricetulus_griseus_crigri
ENSKMAG00000021764	ercc3	100	91.720	ENSCSEG00000016479	ercc3	100	91.720	Cynoglossus_semilaevis
ENSKMAG00000021764	ercc3	100	94.636	ENSCVAG00000015177	ercc3	100	94.636	Cyprinodon_variegatus
ENSKMAG00000021764	ercc3	98	91.917	ENSDARG00000002402	ercc3	100	91.826	Danio_rerio
ENSKMAG00000021764	ercc3	56	92.760	ENSDNOG00000035027	ERCC3	95	92.760	Dasypus_novemcinctus
ENSKMAG00000021764	ercc3	97	89.314	ENSDORG00000004671	Ercc3	100	87.516	Dipodomys_ordii
ENSKMAG00000021764	ercc3	99	68.586	FBgn0001179	hay	99	68.625	Drosophila_melanogaster
ENSKMAG00000021764	ercc3	90	89.348	ENSETEG00000019887	ERCC3	90	89.348	Echinops_telfairi
ENSKMAG00000021764	ercc3	100	79.371	ENSEBUG00000009773	ercc3	100	79.497	Eptatretus_burgeri
ENSKMAG00000021764	ercc3	100	85.856	ENSEASG00005022466	ERCC3	100	85.856	Equus_asinus_asinus
ENSKMAG00000021764	ercc3	100	88.041	ENSECAG00000006589	ERCC3	100	88.041	Equus_caballus
ENSKMAG00000021764	ercc3	93	88.082	ENSEEUG00000001057	ERCC3	99	88.082	Erinaceus_europaeus
ENSKMAG00000021764	ercc3	100	89.554	ENSELUG00000000089	ercc3	99	89.554	Esox_lucius
ENSKMAG00000021764	ercc3	100	87.532	ENSFCAG00000006989	ERCC3	100	87.913	Felis_catus
ENSKMAG00000021764	ercc3	99	86.615	ENSFALG00000003936	ERCC3	99	86.744	Ficedula_albicollis
ENSKMAG00000021764	ercc3	100	87.023	ENSFDAG00000011924	ERCC3	100	87.659	Fukomys_damarensis
ENSKMAG00000021764	ercc3	100	94.125	ENSFHEG00000005185	ercc3	100	94.125	Fundulus_heteroclitus
ENSKMAG00000021764	ercc3	100	89.400	ENSGMOG00000018032	ercc3	99	89.400	Gadus_morhua
ENSKMAG00000021764	ercc3	97	87.467	ENSGALG00000011515	ERCC3	100	86.242	Gallus_gallus
ENSKMAG00000021764	ercc3	100	94.636	ENSGAFG00000011936	ercc3	100	94.636	Gambusia_affinis
ENSKMAG00000021764	ercc3	100	91.847	ENSGACG00000015218	ercc3	99	93.132	Gasterosteus_aculeatus
ENSKMAG00000021764	ercc3	92	89.889	ENSGAGG00000018579	ERCC3	100	89.889	Gopherus_agassizii
ENSKMAG00000021764	ercc3	100	88.168	ENSGGOG00000015255	ERCC3	100	88.168	Gorilla_gorilla
ENSKMAG00000021764	ercc3	100	94.125	ENSHBUG00000003818	ercc3	100	94.125	Haplochromis_burtoni
ENSKMAG00000021764	ercc3	100	87.150	ENSHGLG00000011014	ERCC3	100	87.786	Heterocephalus_glaber_female
ENSKMAG00000021764	ercc3	100	87.150	ENSHGLG00100013806	ERCC3	100	87.786	Heterocephalus_glaber_male
ENSKMAG00000021764	ercc3	100	91.060	ENSHCOG00000016924	ercc3	100	91.060	Hippocampus_comes
ENSKMAG00000021764	ercc3	100	90.549	ENSIPUG00000021000	ercc3	100	90.549	Ictalurus_punctatus
ENSKMAG00000021764	ercc3	100	87.532	ENSSTOG00000011001	ERCC3	100	87.786	Ictidomys_tridecemlineatus
ENSKMAG00000021764	ercc3	90	87.870	ENSJJAG00000001117	Ercc3	100	87.870	Jaculus_jaculus
ENSKMAG00000021764	ercc3	100	92.720	ENSLBEG00000000468	ercc3	100	92.720	Labrus_bergylta
ENSKMAG00000021764	ercc3	96	83.963	ENSLACG00000014815	ERCC3	100	82.560	Latimeria_chalumnae
ENSKMAG00000021764	ercc3	90	88.136	ENSLOCG00000010907	ercc3	87	88.011	Lepisosteus_oculatus
ENSKMAG00000021764	ercc3	100	87.150	ENSLAFG00000014866	ERCC3	100	87.786	Loxodonta_africana
ENSKMAG00000021764	ercc3	100	88.168	ENSMFAG00000003370	ERCC3	100	88.168	Macaca_fascicularis
ENSKMAG00000021764	ercc3	100	84.422	ENSMNEG00000004215	ERCC3	100	84.422	Macaca_nemestrina
ENSKMAG00000021764	ercc3	100	88.168	ENSMLEG00000042061	ERCC3	100	88.168	Mandrillus_leucophaeus
ENSKMAG00000021764	ercc3	100	93.487	ENSMAMG00000004505	ercc3	99	93.487	Mastacembelus_armatus
ENSKMAG00000021764	ercc3	100	94.125	ENSMZEG00005004854	ercc3	100	94.125	Maylandia_zebra
ENSKMAG00000021764	ercc3	90	88.983	ENSMGAG00000011706	ERCC3	100	88.983	Meleagris_gallopavo
ENSKMAG00000021764	ercc3	100	87.421	ENSMAUG00000004515	Ercc3	100	88.056	Mesocricetus_auratus
ENSKMAG00000021764	ercc3	100	87.277	ENSMICG00000009578	ERCC3	100	87.659	Microcebus_murinus
ENSKMAG00000021764	ercc3	100	87.532	ENSMOCG00000021767	Ercc3	100	88.041	Microtus_ochrogaster
ENSKMAG00000021764	ercc3	99	92.506	ENSMMOG00000018174	ercc3	99	92.506	Mola_mola
ENSKMAG00000021764	ercc3	97	88.918	ENSMODG00000018695	ERCC3	100	88.168	Monodelphis_domestica
ENSKMAG00000021764	ercc3	100	93.742	ENSMALG00000014944	ercc3	100	93.742	Monopterus_albus
ENSKMAG00000021764	ercc3	100	87.405	MGP_CAROLIEiJ_G0022075	Ercc3	100	87.786	Mus_caroli
ENSKMAG00000021764	ercc3	100	87.548	ENSMUSG00000024382	Ercc3	100	87.929	Mus_musculus
ENSKMAG00000021764	ercc3	100	87.659	MGP_PahariEiJ_G0018809	Ercc3	100	88.041	Mus_pahari
ENSKMAG00000021764	ercc3	100	87.421	MGP_SPRETEiJ_G0022987	Ercc3	100	87.802	Mus_spretus
ENSKMAG00000021764	ercc3	100	87.532	ENSMPUG00000012021	ERCC3	100	87.913	Mustela_putorius_furo
ENSKMAG00000021764	ercc3	93	85.479	ENSMLUG00000007429	ERCC3	99	85.479	Myotis_lucifugus
ENSKMAG00000021764	ercc3	97	86.911	ENSNGAG00000019598	Ercc3	99	89.417	Nannospalax_galili
ENSKMAG00000021764	ercc3	100	94.125	ENSNBRG00000019074	ercc3	100	94.125	Neolamprologus_brichardi
ENSKMAG00000021764	ercc3	92	87.639	ENSNLEG00000015665	ERCC3	97	87.639	Nomascus_leucogenys
ENSKMAG00000021764	ercc3	100	85.878	ENSOPRG00000004553	ERCC3	100	86.005	Ochotona_princeps
ENSKMAG00000021764	ercc3	100	87.277	ENSODEG00000005795	ERCC3	100	88.041	Octodon_degus
ENSKMAG00000021764	ercc3	100	93.997	ENSONIG00000003255	ercc3	100	93.997	Oreochromis_niloticus
ENSKMAG00000021764	ercc3	100	87.277	ENSOCUG00000002248	ERCC3	100	87.659	Oryctolagus_cuniculus
ENSKMAG00000021764	ercc3	100	92.593	ENSORLG00000004393	ercc3	100	92.593	Oryzias_latipes
ENSKMAG00000021764	ercc3	100	92.474	ENSORLG00020017718	ercc3	100	92.474	Oryzias_latipes_hni
ENSKMAG00000021764	ercc3	100	92.720	ENSORLG00015015695	ercc3	100	92.720	Oryzias_latipes_hsok
ENSKMAG00000021764	ercc3	100	93.231	ENSOMEG00000015374	ercc3	100	93.231	Oryzias_melastigma
ENSKMAG00000021764	ercc3	100	87.183	ENSOGAG00000009103	ERCC3	100	87.563	Otolemur_garnettii
ENSKMAG00000021764	ercc3	100	87.659	ENSOARG00000016147	ERCC3	100	87.659	Ovis_aries
ENSKMAG00000021764	ercc3	100	88.168	ENSPPAG00000036166	ERCC3	100	88.168	Pan_paniscus
ENSKMAG00000021764	ercc3	100	87.659	ENSPPRG00000001305	ERCC3	100	88.041	Panthera_pardus
ENSKMAG00000021764	ercc3	92	90.028	ENSPTIG00000016969	ERCC3	100	90.028	Panthera_tigris_altaica
ENSKMAG00000021764	ercc3	100	88.168	ENSPTRG00000046940	ERCC3	100	88.168	Pan_troglodytes
ENSKMAG00000021764	ercc3	100	88.168	ENSPANG00000007699	ERCC3	100	88.168	Papio_anubis
ENSKMAG00000021764	ercc3	100	89.796	ENSPKIG00000001319	ercc3	99	90.861	Paramormyrops_kingsleyae
ENSKMAG00000021764	ercc3	92	89.335	ENSPSIG00000014682	ERCC3	100	89.335	Pelodiscus_sinensis
ENSKMAG00000021764	ercc3	96	93.245	ENSPMGG00000017885	ercc3	99	92.209	Periophthalmus_magnuspinnatus
ENSKMAG00000021764	ercc3	100	88.041	ENSPEMG00000013733	Ercc3	100	88.550	Peromyscus_maniculatus_bairdii
ENSKMAG00000021764	ercc3	90	78.581	ENSPMAG00000005081	ercc3	99	78.581	Petromyzon_marinus
ENSKMAG00000021764	ercc3	100	87.372	ENSPCIG00000011821	ERCC3	100	88.041	Phascolarctos_cinereus
ENSKMAG00000021764	ercc3	98	94.661	ENSPFOG00000015604	ercc3	100	94.125	Poecilia_formosa
ENSKMAG00000021764	ercc3	98	91.948	ENSPLAG00000022245	ercc3	100	95.562	Poecilia_latipinna
ENSKMAG00000021764	ercc3	98	94.661	ENSPMEG00000016987	ercc3	100	94.125	Poecilia_mexicana
ENSKMAG00000021764	ercc3	100	94.381	ENSPREG00000020921	ercc3	100	94.381	Poecilia_reticulata
ENSKMAG00000021764	ercc3	100	87.421	ENSPPYG00000012769	ERCC3	100	87.421	Pongo_abelii
ENSKMAG00000021764	ercc3	100	87.913	ENSPCOG00000024903	ERCC3	100	87.913	Propithecus_coquereli
ENSKMAG00000021764	ercc3	90	87.209	ENSPVAG00000013774	ERCC3	90	87.209	Pteropus_vampyrus
ENSKMAG00000021764	ercc3	100	94.125	ENSPNYG00000001208	ercc3	100	94.125	Pundamilia_nyererei
ENSKMAG00000021764	ercc3	100	91.699	ENSPNAG00000005748	ercc3	100	91.699	Pygocentrus_nattereri
ENSKMAG00000021764	ercc3	100	87.786	ENSRNOG00000013180	Ercc3	100	88.168	Rattus_norvegicus
ENSKMAG00000021764	ercc3	100	88.041	ENSRBIG00000027692	ERCC3	100	88.041	Rhinopithecus_bieti
ENSKMAG00000021764	ercc3	100	88.041	ENSRROG00000040673	ERCC3	100	88.041	Rhinopithecus_roxellana
ENSKMAG00000021764	ercc3	99	53.317	YIL143C	SSL2	85	56.114	Saccharomyces_cerevisiae
ENSKMAG00000021764	ercc3	100	87.786	ENSSBOG00000023079	ERCC3	100	87.786	Saimiri_boliviensis_boliviensis
ENSKMAG00000021764	ercc3	97	88.918	ENSSHAG00000007423	ERCC3	100	88.041	Sarcophilus_harrisii
ENSKMAG00000021764	ercc3	96	90.861	ENSSFOG00015012753	ercc3	100	89.158	Scleropages_formosus
ENSKMAG00000021764	ercc3	100	91.985	ENSSMAG00000011915	ercc3	100	91.730	Scophthalmus_maximus
ENSKMAG00000021764	ercc3	100	93.997	ENSSDUG00000021181	ercc3	100	93.997	Seriola_dumerili
ENSKMAG00000021764	ercc3	100	94.253	ENSSLDG00000008744	ercc3	98	94.253	Seriola_lalandi_dorsalis
ENSKMAG00000021764	ercc3	55	80.920	ENSSARG00000000751	-	85	80.920	Sorex_araneus
ENSKMAG00000021764	ercc3	90	88.277	ENSSPUG00000015183	ERCC3	91	88.277	Sphenodon_punctatus
ENSKMAG00000021764	ercc3	100	94.764	ENSSPAG00000004748	ercc3	100	94.764	Stegastes_partitus
ENSKMAG00000021764	ercc3	100	87.913	ENSSSCG00000015721	ERCC3	100	93.922	Sus_scrofa
ENSKMAG00000021764	ercc3	99	88.015	ENSTGUG00000004920	-	99	88.531	Taeniopygia_guttata
ENSKMAG00000021764	ercc3	100	91.188	ENSTRUG00000017185	ercc3	100	91.188	Takifugu_rubripes
ENSKMAG00000021764	ercc3	98	89.673	ENSTNIG00000005457	ercc3	99	90.861	Tetraodon_nigroviridis
ENSKMAG00000021764	ercc3	80	88.871	ENSTBEG00000009381	ERCC3	81	88.871	Tupaia_belangeri
ENSKMAG00000021764	ercc3	68	93.208	ENSUAMG00000009589	-	100	93.208	Ursus_americanus
ENSKMAG00000021764	ercc3	100	87.277	ENSUMAG00000008361	ERCC3	100	87.659	Ursus_maritimus
ENSKMAG00000021764	ercc3	92	89.612	ENSVVUG00000010431	ERCC3	100	89.612	Vulpes_vulpes
ENSKMAG00000021764	ercc3	100	86.439	ENSXETG00000033646	ercc3	100	86.312	Xenopus_tropicalis
ENSKMAG00000021764	ercc3	99	94.444	ENSXCOG00000001791	ercc3	99	94.444	Xiphophorus_couchianus
ENSKMAG00000021764	ercc3	100	94.764	ENSXMAG00000003641	ercc3	100	94.764	Xiphophorus_maculatus