EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000021773 (Gene tree)
Gene ID: 108234722
Gene Symbol: -
Alias: -
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 148493 bases
Position: chrLWHD01000028.1:2196320-2344812
Accession: 108234722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000029419	Ribonuclease_3	PF00636.26	1.5e-42	1	2
ENSKMAP00000029419	Ribonuclease_3	PF00636.26	1.5e-42	2	2
ENSKMAP00000029406	Ribonuclease_3	PF00636.26	1.5e-42	1	2
ENSKMAP00000029406	Ribonuclease_3	PF00636.26	1.5e-42	2	2
ENSKMAP00000029419	dsrm	PF00035.26	9.7e-15	1	1
ENSKMAP00000029406	dsrm	PF00035.26	9.7e-15	1	1
ENSKMAP00000029419	Ribonucleas_3_3	PF14622.6	1e-44	1	2
ENSKMAP00000029419	Ribonucleas_3_3	PF14622.6	1e-44	2	2
ENSKMAP00000029406	Ribonucleas_3_3	PF14622.6	1.1e-44	1	2
ENSKMAP00000029406	Ribonucleas_3_3	PF14622.6	1.1e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000029785	-	3927	-	ENSKMAP00000029419	1308 (aa)	-	-
ENSKMAT00000029772	-	9221	XM_017414122	ENSKMAP00000029406	1338 (aa)	XP_017269611	UPI0007F871E5

Gene Model

Click here to download ENSKMAG00000021773's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021773's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021773	-	88	80.369	ENSOARG00000012525	-	97	81.997	Ovis_aries
ENSKMAG00000021773	-	88	78.451	ENSPSIG00000008708	-	99	80.168	Pelodiscus_sinensis
ENSKMAG00000021773	-	100	90.956	ENSSPAG00000020364	-	95	96.513	Stegastes_partitus
ENSKMAG00000021773	-	100	87.547	ENSXMAG00000014115	-	98	89.462	Xiphophorus_maculatus