EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000021805 (Gene tree)
Gene ID: 108235722
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: mitochondrial RNA pseudouridine synthase rpusd4-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 8765 bases
Position: chrLWHD01000035.1:3944477-3953241
Accession: 108235722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000029429	PseudoU_synth_2	PF00849.22	4.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000029795	-	5959	XM_017415909	ENSKMAP00000029429	383 (aa)	XP_017271398	UPI0007F8DD5D

Gene Model

Click here to download ENSKMAG00000021805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021805's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021805	rpusd4	84	51.840	ENSG00000165526	RPUSD4	89	50.737	Homo_sapiens
ENSKMAG00000021805	rpusd4	100	70.408	ENSAPOG00000011024	rpusd4	98	70.408	Acanthochromis_polyacanthus
ENSKMAG00000021805	rpusd4	76	46.032	ENSAMEG00000005953	-	95	46.032	Ailuropoda_melanoleuca
ENSKMAG00000021805	rpusd4	89	52.339	ENSAMEG00000000127	-	89	52.339	Ailuropoda_melanoleuca
ENSKMAG00000021805	rpusd4	85	73.313	ENSACIG00000003533	rpusd4	96	73.313	Amphilophus_citrinellus
ENSKMAG00000021805	rpusd4	100	70.153	ENSAOCG00000015409	rpusd4	97	70.153	Amphiprion_ocellaris
ENSKMAG00000021805	rpusd4	100	70.408	ENSAPEG00000018935	rpusd4	97	70.408	Amphiprion_percula
ENSKMAG00000021805	rpusd4	100	70.844	ENSATEG00000008059	rpusd4	96	70.844	Anabas_testudineus
ENSKMAG00000021805	rpusd4	73	52.482	ENSAPLG00000013250	RPUSD4	96	52.650	Anas_platyrhynchos
ENSKMAG00000021805	rpusd4	92	49.859	ENSACAG00000000189	RPUSD4	96	49.859	Anolis_carolinensis
ENSKMAG00000021805	rpusd4	88	51.471	ENSANAG00000024050	RPUSD4	90	51.471	Aotus_nancymaae
ENSKMAG00000021805	rpusd4	99	70.769	ENSACLG00000020996	rpusd4	99	70.769	Astatotilapia_calliptera
ENSKMAG00000021805	rpusd4	93	58.056	ENSAMXG00000031479	rpusd4	99	57.910	Astyanax_mexicanus
ENSKMAG00000021805	rpusd4	95	50.685	ENSBTAG00000020900	RPUSD4	94	50.685	Bos_taurus
ENSKMAG00000021805	rpusd4	87	51.642	ENSCJAG00000042850	RPUSD4	83	51.642	Callithrix_jacchus
ENSKMAG00000021805	rpusd4	86	54.683	ENSCAFG00000010488	RPUSD4	86	54.683	Canis_familiaris
ENSKMAG00000021805	rpusd4	86	54.683	ENSCAFG00020010621	RPUSD4	86	54.683	Canis_lupus_dingo
ENSKMAG00000021805	rpusd4	85	51.807	ENSCHIG00000009975	RPUSD4	94	50.411	Capra_hircus
ENSKMAG00000021805	rpusd4	88	52.212	ENSTSYG00000008456	RPUSD4	89	52.212	Carlito_syrichta
ENSKMAG00000021805	rpusd4	64	51.417	ENSCAPG00000006040	RPUSD4	94	51.417	Cavia_aperea
ENSKMAG00000021805	rpusd4	97	51.200	ENSCPOG00000014971	RPUSD4	96	51.200	Cavia_porcellus
ENSKMAG00000021805	rpusd4	88	51.312	ENSCCAG00000027838	RPUSD4	91	51.312	Cebus_capucinus
ENSKMAG00000021805	rpusd4	88	49.853	ENSCATG00000041570	RPUSD4	89	49.853	Cercocebus_atys
ENSKMAG00000021805	rpusd4	88	53.235	ENSCLAG00000016553	RPUSD4	89	53.235	Chinchilla_lanigera
ENSKMAG00000021805	rpusd4	88	50.442	ENSCSAG00000002274	RPUSD4	89	50.442	Chlorocebus_sabaeus
ENSKMAG00000021805	rpusd4	72	55.235	ENSCHOG00000010249	RPUSD4	96	55.235	Choloepus_hoffmanni
ENSKMAG00000021805	rpusd4	75	56.207	ENSCPBG00000011175	RPUSD4	99	56.207	Chrysemys_picta_bellii
ENSKMAG00000021805	rpusd4	83	37.500	ENSCSAVG00000000872	-	63	37.500	Ciona_savignyi
ENSKMAG00000021805	rpusd4	92	49.020	ENSCANG00000039684	RPUSD4	93	49.020	Colobus_angolensis_palliatus
ENSKMAG00000021805	rpusd4	84	53.374	ENSCGRG00001024141	Rpusd4	85	53.374	Cricetulus_griseus_chok1gshd
ENSKMAG00000021805	rpusd4	84	53.374	ENSCGRG00000014415	Rpusd4	85	53.374	Cricetulus_griseus_crigri
ENSKMAG00000021805	rpusd4	91	73.487	ENSCVAG00000000392	rpusd4	98	73.487	Cyprinodon_variegatus
ENSKMAG00000021805	rpusd4	100	68.182	ENSCVAG00000008761	rpusd4	99	68.182	Cyprinodon_variegatus
ENSKMAG00000021805	rpusd4	92	55.211	ENSDARG00000012674	rpusd4	98	55.211	Danio_rerio
ENSKMAG00000021805	rpusd4	86	52.252	ENSDNOG00000020026	RPUSD4	87	52.252	Dasypus_novemcinctus
ENSKMAG00000021805	rpusd4	88	51.312	ENSDORG00000016717	Rpusd4	89	51.312	Dipodomys_ordii
ENSKMAG00000021805	rpusd4	88	53.529	ENSETEG00000013953	RPUSD4	89	53.529	Echinops_telfairi
ENSKMAG00000021805	rpusd4	88	51.176	ENSEASG00005022982	RPUSD4	89	51.176	Equus_asinus_asinus
ENSKMAG00000021805	rpusd4	88	51.471	ENSECAG00000000557	RPUSD4	89	51.471	Equus_caballus
ENSKMAG00000021805	rpusd4	67	58.564	ENSEEUG00000014036	RPUSD4	68	58.564	Erinaceus_europaeus
ENSKMAG00000021805	rpusd4	87	62.391	ENSELUG00000008075	rpusd4	89	62.391	Esox_lucius
ENSKMAG00000021805	rpusd4	94	51.657	ENSFCAG00000029789	RPUSD4	95	51.366	Felis_catus
ENSKMAG00000021805	rpusd4	85	48.773	ENSFALG00000005171	RPUSD4	96	48.773	Ficedula_albicollis
ENSKMAG00000021805	rpusd4	88	51.765	ENSFDAG00000014307	RPUSD4	90	51.765	Fukomys_damarensis
ENSKMAG00000021805	rpusd4	100	71.939	ENSFHEG00000004329	rpusd4	99	71.939	Fundulus_heteroclitus
ENSKMAG00000021805	rpusd4	84	60.185	ENSGMOG00000017726	rpusd4	97	60.061	Gadus_morhua
ENSKMAG00000021805	rpusd4	73	54.610	ENSGALG00000024326	RPUSD4	90	50.920	Gallus_gallus
ENSKMAG00000021805	rpusd4	100	67.424	ENSGAFG00000021559	rpusd4	99	67.424	Gambusia_affinis
ENSKMAG00000021805	rpusd4	86	71.733	ENSGACG00000001657	rpusd4	98	72.036	Gasterosteus_aculeatus
ENSKMAG00000021805	rpusd4	91	51.412	ENSGAGG00000000132	RPUSD4	95	51.412	Gopherus_agassizii
ENSKMAG00000021805	rpusd4	84	52.454	ENSGGOG00000016494	RPUSD4	89	51.032	Gorilla_gorilla
ENSKMAG00000021805	rpusd4	99	70.513	ENSHBUG00000022838	rpusd4	99	70.513	Haplochromis_burtoni
ENSKMAG00000021805	rpusd4	88	51.765	ENSHGLG00000002285	RPUSD4	89	51.765	Heterocephalus_glaber_female
ENSKMAG00000021805	rpusd4	88	51.765	ENSHGLG00100006385	RPUSD4	89	51.765	Heterocephalus_glaber_male
ENSKMAG00000021805	rpusd4	99	66.327	ENSHCOG00000006612	rpusd4	99	66.327	Hippocampus_comes
ENSKMAG00000021805	rpusd4	99	54.103	ENSIPUG00000023879	rusd4	99	54.103	Ictalurus_punctatus
ENSKMAG00000021805	rpusd4	87	53.433	ENSSTOG00000025280	RPUSD4	90	53.433	Ictidomys_tridecemlineatus
ENSKMAG00000021805	rpusd4	88	53.061	ENSJJAG00000018673	Rpusd4	91	53.061	Jaculus_jaculus
ENSKMAG00000021805	rpusd4	97	68.901	ENSLBEG00000020394	rpusd4	93	75.075	Labrus_bergylta
ENSKMAG00000021805	rpusd4	85	54.573	ENSLACG00000011028	RPUSD4	85	53.061	Latimeria_chalumnae
ENSKMAG00000021805	rpusd4	97	44.709	ENSLOCG00000003124	rpusd4	96	44.709	Lepisosteus_oculatus
ENSKMAG00000021805	rpusd4	88	53.097	ENSLAFG00000005211	RPUSD4	100	46.102	Loxodonta_africana
ENSKMAG00000021805	rpusd4	88	50.147	ENSMFAG00000039513	RPUSD4	89	50.147	Macaca_fascicularis
ENSKMAG00000021805	rpusd4	88	49.853	ENSMMUG00000007933	RPUSD4	89	49.853	Macaca_mulatta
ENSKMAG00000021805	rpusd4	88	50.147	ENSMNEG00000027414	RPUSD4	89	50.147	Macaca_nemestrina
ENSKMAG00000021805	rpusd4	88	50.442	ENSMLEG00000042461	RPUSD4	89	50.442	Mandrillus_leucophaeus
ENSKMAG00000021805	rpusd4	100	68.542	ENSMAMG00000023839	rpusd4	99	68.542	Mastacembelus_armatus
ENSKMAG00000021805	rpusd4	99	70.769	ENSMZEG00005011999	rpusd4	99	70.769	Maylandia_zebra
ENSKMAG00000021805	rpusd4	72	53.546	ENSMGAG00000000840	RPUSD4	98	49.695	Meleagris_gallopavo
ENSKMAG00000021805	rpusd4	84	53.374	ENSMAUG00000010280	Rpusd4	85	53.374	Mesocricetus_auratus
ENSKMAG00000021805	rpusd4	88	51.917	ENSMICG00000015979	RPUSD4	89	55.960	Microcebus_murinus
ENSKMAG00000021805	rpusd4	84	51.534	ENSMOCG00000000661	Rpusd4	85	51.534	Microtus_ochrogaster
ENSKMAG00000021805	rpusd4	80	75.896	ENSMMOG00000021731	rpusd4	92	75.896	Mola_mola
ENSKMAG00000021805	rpusd4	81	54.167	ENSMODG00000004521	RPUSD4	79	54.167	Monodelphis_domestica
ENSKMAG00000021805	rpusd4	80	74.593	ENSMALG00000005839	rpusd4	97	72.956	Monopterus_albus
ENSKMAG00000021805	rpusd4	84	53.067	MGP_CAROLIEiJ_G0031954	Rpusd4	85	53.067	Mus_caroli
ENSKMAG00000021805	rpusd4	84	53.374	ENSMUSG00000032044	Rpusd4	85	53.374	Mus_musculus
ENSKMAG00000021805	rpusd4	84	53.067	MGP_PahariEiJ_G0014819	Rpusd4	85	53.067	Mus_pahari
ENSKMAG00000021805	rpusd4	84	53.067	MGP_SPRETEiJ_G0033078	Rpusd4	85	53.067	Mus_spretus
ENSKMAG00000021805	rpusd4	89	53.216	ENSMPUG00000006608	RPUSD4	89	53.216	Mustela_putorius_furo
ENSKMAG00000021805	rpusd4	66	53.516	ENSMLUG00000029348	-	99	53.516	Myotis_lucifugus
ENSKMAG00000021805	rpusd4	88	52.802	ENSMLUG00000017328	-	88	52.199	Myotis_lucifugus
ENSKMAG00000021805	rpusd4	86	55.389	ENSNGAG00000020847	Rpusd4	87	55.389	Nannospalax_galili
ENSKMAG00000021805	rpusd4	85	77.231	ENSNBRG00000005207	rpusd4	94	77.231	Neolamprologus_brichardi
ENSKMAG00000021805	rpusd4	92	48.739	ENSNLEG00000007465	RPUSD4	93	48.739	Nomascus_leucogenys
ENSKMAG00000021805	rpusd4	85	53.354	ENSMEUG00000004370	RPUSD4	87	53.354	Notamacropus_eugenii
ENSKMAG00000021805	rpusd4	88	52.059	ENSODEG00000004577	RPUSD4	89	52.059	Octodon_degus
ENSKMAG00000021805	rpusd4	99	71.795	ENSONIG00000018879	rpusd4	99	71.795	Oreochromis_niloticus
ENSKMAG00000021805	rpusd4	76	51.007	ENSOANG00000007247	RPUSD4	95	50.831	Ornithorhynchus_anatinus
ENSKMAG00000021805	rpusd4	88	52.493	ENSOCUG00000017039	RPUSD4	89	52.493	Oryctolagus_cuniculus
ENSKMAG00000021805	rpusd4	95	68.835	ENSORLG00000002750	rpusd4	95	71.105	Oryzias_latipes
ENSKMAG00000021805	rpusd4	94	70.083	ENSORLG00020002044	rpusd4	89	70.083	Oryzias_latipes_hni
ENSKMAG00000021805	rpusd4	94	69.972	ENSORLG00015020034	rpusd4	92	68.351	Oryzias_latipes_hsok
ENSKMAG00000021805	rpusd4	92	70.986	ENSOMEG00000004861	rpusd4	87	70.986	Oryzias_melastigma
ENSKMAG00000021805	rpusd4	84	53.988	ENSOGAG00000008922	RPUSD4	86	53.776	Otolemur_garnettii
ENSKMAG00000021805	rpusd4	85	51.807	ENSOARG00000012238	RPUSD4	94	50.411	Ovis_aries
ENSKMAG00000021805	rpusd4	84	51.840	ENSPPAG00000042883	RPUSD4	82	50.442	Pan_paniscus
ENSKMAG00000021805	rpusd4	95	51.093	ENSPPRG00000003081	RPUSD4	95	51.093	Panthera_pardus
ENSKMAG00000021805	rpusd4	95	51.093	ENSPTIG00000012059	RPUSD4	95	51.093	Panthera_tigris_altaica
ENSKMAG00000021805	rpusd4	84	51.840	ENSPTRG00000004454	RPUSD4	89	50.442	Pan_troglodytes
ENSKMAG00000021805	rpusd4	88	50.147	ENSPANG00000015040	RPUSD4	89	50.147	Papio_anubis
ENSKMAG00000021805	rpusd4	94	57.341	ENSPKIG00000023986	rpusd4	92	57.341	Paramormyrops_kingsleyae
ENSKMAG00000021805	rpusd4	77	55.405	ENSPSIG00000014268	RPUSD4	93	55.405	Pelodiscus_sinensis
ENSKMAG00000021805	rpusd4	86	69.277	ENSPMGG00000002806	rpusd4	92	67.576	Periophthalmus_magnuspinnatus
ENSKMAG00000021805	rpusd4	86	44.311	ENSPEMG00000000278	Rpusd4	86	44.311	Peromyscus_maniculatus_bairdii
ENSKMAG00000021805	rpusd4	77	42.284	ENSPMAG00000008183	rpusd4	94	42.284	Petromyzon_marinus
ENSKMAG00000021805	rpusd4	87	52.679	ENSPCIG00000010212	RPUSD4	91	52.679	Phascolarctos_cinereus
ENSKMAG00000021805	rpusd4	95	68.684	ENSPFOG00000019030	rpusd4	99	68.684	Poecilia_formosa
ENSKMAG00000021805	rpusd4	100	67.929	ENSPLAG00000016848	rpusd4	99	67.929	Poecilia_latipinna
ENSKMAG00000021805	rpusd4	100	67.172	ENSPMEG00000017534	rpusd4	99	67.172	Poecilia_mexicana
ENSKMAG00000021805	rpusd4	98	66.667	ENSPREG00000005689	rpusd4	98	66.667	Poecilia_reticulata
ENSKMAG00000021805	rpusd4	86	50.755	ENSPPYG00000004043	RPUSD4	86	50.755	Pongo_abelii
ENSKMAG00000021805	rpusd4	75	57.386	ENSPCAG00000000753	RPUSD4	72	57.386	Procavia_capensis
ENSKMAG00000021805	rpusd4	88	49.704	ENSPCOG00000020694	RPUSD4	89	49.704	Propithecus_coquereli
ENSKMAG00000021805	rpusd4	88	50.588	ENSPVAG00000000988	RPUSD4	89	50.588	Pteropus_vampyrus
ENSKMAG00000021805	rpusd4	99	69.744	ENSPNYG00000009652	rpusd4	99	69.744	Pundamilia_nyererei
ENSKMAG00000021805	rpusd4	93	59.167	ENSPNAG00000012264	rpusd4	94	59.167	Pygocentrus_nattereri
ENSKMAG00000021805	rpusd4	95	51.366	ENSRNOG00000011567	Rpusd4	94	51.366	Rattus_norvegicus
ENSKMAG00000021805	rpusd4	91	49.148	ENSRBIG00000034842	RPUSD4	93	48.739	Rhinopithecus_bieti
ENSKMAG00000021805	rpusd4	91	49.148	ENSRROG00000039753	RPUSD4	93	48.739	Rhinopithecus_roxellana
ENSKMAG00000021805	rpusd4	87	52.239	ENSSBOG00000030413	RPUSD4	88	52.239	Saimiri_boliviensis_boliviensis
ENSKMAG00000021805	rpusd4	78	54.785	ENSSHAG00000008304	RPUSD4	99	54.785	Sarcophilus_harrisii
ENSKMAG00000021805	rpusd4	85	59.517	ENSSFOG00015006203	rpusd4	89	59.517	Scleropages_formosus
ENSKMAG00000021805	rpusd4	100	71.279	ENSSMAG00000020978	rpusd4	99	71.658	Scophthalmus_maximus
ENSKMAG00000021805	rpusd4	99	69.554	ENSSDUG00000013399	rpusd4	100	69.554	Seriola_dumerili
ENSKMAG00000021805	rpusd4	99	70.341	ENSSLDG00000023507	rpusd4	100	70.341	Seriola_lalandi_dorsalis
ENSKMAG00000021805	rpusd4	77	55.743	ENSSPUG00000001401	RPUSD4	91	52.212	Sphenodon_punctatus
ENSKMAG00000021805	rpusd4	100	69.744	ENSSPAG00000012163	rpusd4	99	69.744	Stegastes_partitus
ENSKMAG00000021805	rpusd4	94	49.862	ENSSSCG00000015233	RPUSD4	94	49.862	Sus_scrofa
ENSKMAG00000021805	rpusd4	78	51.667	ENSTGUG00000000773	RPUSD4	99	51.667	Taeniopygia_guttata
ENSKMAG00000021805	rpusd4	91	70.286	ENSTRUG00000012283	rpusd4	89	70.286	Takifugu_rubripes
ENSKMAG00000021805	rpusd4	90	70.520	ENSTNIG00000014676	rpusd4	88	70.520	Tetraodon_nigroviridis
ENSKMAG00000021805	rpusd4	88	51.471	ENSTTRG00000001555	RPUSD4	89	51.471	Tursiops_truncatus
ENSKMAG00000021805	rpusd4	89	52.339	ENSUMAG00000002219	RPUSD4	89	52.339	Ursus_maritimus
ENSKMAG00000021805	rpusd4	60	48.261	ENSVPAG00000001066	RPUSD4	85	48.261	Vicugna_pacos
ENSKMAG00000021805	rpusd4	86	54.683	ENSVVUG00000020101	RPUSD4	86	54.683	Vulpes_vulpes
ENSKMAG00000021805	rpusd4	100	67.929	ENSXCOG00000004676	rpusd4	99	67.929	Xiphophorus_couchianus
ENSKMAG00000021805	rpusd4	100	67.929	ENSXMAG00000023351	rpusd4	99	67.929	Xiphophorus_maculatus