EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000021880 (Gene tree)
Gene ID: 108241542
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 2-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 62948 bases
Position: chrLWHD01000087.1:689302-752249
Accession: 108241542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000029546	Fox-1_C	PF12414.8	4.6e-36	1	1
ENSKMAP00000029553	Fox-1_C	PF12414.8	6.4e-34	1	1
ENSKMAP00000029553	RRM_1	PF00076.22	3.5e-18	1	1
ENSKMAP00000029546	RRM_1	PF00076.22	3.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000029920	-	6203	XM_017425770	ENSKMAP00000029553	452 (aa)	XP_017281259	UPI0007F8B2E8
ENSKMAT00000029913	-	6212	XM_017425769	ENSKMAP00000029546	455 (aa)	XP_017281258	UPI0007F9048E

Gene Model

Click here to download ENSKMAG00000021880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000021880	-	100	69.083	ENSKMAG00000013354	-	100	70.190
ENSKMAG00000021880	-	73	54.596	ENSKMAG00000006726	rbfox3b	70	56.811
ENSKMAG00000021880	-	56	65.267	ENSKMAG00000005146	rbfox1l	64	65.299

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021880	-	91	56.674	ENSG00000100320	RBFOX2	99	65.041	Homo_sapiens
ENSKMAG00000021880	-	100	70.664	ENSAPOG00000021561	-	100	71.702	Acanthochromis_polyacanthus
ENSKMAG00000021880	-	100	92.140	ENSAPOG00000004877	rbfox2	100	89.956	Acanthochromis_polyacanthus
ENSKMAG00000021880	-	62	67.405	ENSAMEG00000007228	RBFOX2	94	70.470	Ailuropoda_melanoleuca
ENSKMAG00000021880	-	50	83.186	ENSACIG00000001690	rbfox2	89	80.000	Amphilophus_citrinellus
ENSKMAG00000021880	-	100	71.121	ENSAOCG00000015358	-	100	72.009	Amphiprion_ocellaris
ENSKMAG00000021880	-	100	91.703	ENSAOCG00000013752	rbfox2	100	90.175	Amphiprion_ocellaris
ENSKMAG00000021880	-	100	91.921	ENSAPEG00000022359	rbfox2	100	90.175	Amphiprion_percula
ENSKMAG00000021880	-	100	71.121	ENSAPEG00000013905	-	100	72.009	Amphiprion_percula
ENSKMAG00000021880	-	100	87.555	ENSATEG00000021951	rbfox2	100	86.463	Anabas_testudineus
ENSKMAG00000021880	-	100	70.538	ENSATEG00000009959	-	100	72.068	Anabas_testudineus
ENSKMAG00000021880	-	72	61.050	ENSAPLG00000007609	RBFOX2	79	66.981	Anas_platyrhynchos
ENSKMAG00000021880	-	94	55.696	ENSACAG00000016535	RBFOX2	97	56.144	Anolis_carolinensis
ENSKMAG00000021880	-	62	67.732	ENSANAG00000015245	RBFOX2	91	71.088	Aotus_nancymaae
ENSKMAG00000021880	-	100	70.726	ENSACLG00000017380	-	100	71.550	Astatotilapia_calliptera
ENSKMAG00000021880	-	100	90.372	ENSACLG00000009744	rbfox2	100	91.904	Astatotilapia_calliptera
ENSKMAG00000021880	-	100	76.559	ENSAMXG00000011451	rbfox2	100	76.774	Astyanax_mexicanus
ENSKMAG00000021880	-	91	56.209	ENSBTAG00000020125	RBFOX2	96	56.371	Bos_taurus
ENSKMAG00000021880	-	91	56.863	ENSCJAG00000019456	-	97	56.559	Callithrix_jacchus
ENSKMAG00000021880	-	72	60.942	ENSCJAG00000038886	-	77	67.405	Callithrix_jacchus
ENSKMAG00000021880	-	72	61.219	ENSCAFG00000001701	RBFOX2	91	61.496	Canis_familiaris
ENSKMAG00000021880	-	91	50.000	ENSCAFG00020004541	RBFOX2	96	49.783	Canis_lupus_dingo
ENSKMAG00000021880	-	91	56.484	ENSCHIG00000014027	RBFOX2	96	57.778	Capra_hircus
ENSKMAG00000021880	-	81	59.024	ENSTSYG00000014123	RBFOX2	100	58.881	Carlito_syrichta
ENSKMAG00000021880	-	69	61.398	ENSCAPG00000014308	RBFOX2	68	68.702	Cavia_aperea
ENSKMAG00000021880	-	72	62.155	ENSCPOG00000022180	RBFOX2	74	69.283	Cavia_porcellus
ENSKMAG00000021880	-	91	56.957	ENSCCAG00000036584	RBFOX2	96	56.739	Cebus_capucinus
ENSKMAG00000021880	-	91	55.752	ENSCATG00000038655	RBFOX2	97	58.128	Cercocebus_atys
ENSKMAG00000021880	-	71	60.388	ENSCLAG00000017106	RBFOX2	74	69.283	Chinchilla_lanigera
ENSKMAG00000021880	-	66	54.678	ENSCSAG00000008110	RBFOX2	88	54.094	Chlorocebus_sabaeus
ENSKMAG00000021880	-	66	53.097	ENSCHOG00000002887	RBFOX2	100	53.982	Choloepus_hoffmanni
ENSKMAG00000021880	-	72	61.326	ENSCPBG00000023144	RBFOX2	84	66.981	Chrysemys_picta_bellii
ENSKMAG00000021880	-	81	59.611	ENSCANG00000035832	RBFOX2	100	59.124	Colobus_angolensis_palliatus
ENSKMAG00000021880	-	91	57.018	ENSCGRG00001017727	Rbfox2	97	56.579	Cricetulus_griseus_chok1gshd
ENSKMAG00000021880	-	72	61.749	ENSCGRG00000014237	Rbfox2	80	66.770	Cricetulus_griseus_crigri
ENSKMAG00000021880	-	100	83.918	ENSCSEG00000007748	rbfox2	100	81.443	Cynoglossus_semilaevis
ENSKMAG00000021880	-	100	68.815	ENSCSEG00000007360	-	100	70.103	Cynoglossus_semilaevis
ENSKMAG00000021880	-	78	61.602	ENSCVAG00000016503	-	98	62.740	Cyprinodon_variegatus
ENSKMAG00000021880	-	51	79.752	ENSDARG00000052182	rbfox2	100	79.752	Danio_rerio
ENSKMAG00000021880	-	72	61.496	ENSDNOG00000004372	RBFOX2	87	61.773	Dasypus_novemcinctus
ENSKMAG00000021880	-	71	57.895	ENSDORG00000015003	Rbfox2	82	62.540	Dipodomys_ordii
ENSKMAG00000021880	-	81	52.897	ENSETEG00000005638	RBFOX2	100	53.769	Echinops_telfairi
ENSKMAG00000021880	-	91	57.456	ENSEASG00005018920	RBFOX2	96	57.456	Equus_asinus_asinus
ENSKMAG00000021880	-	91	57.456	ENSECAG00000018923	RBFOX2	96	57.456	Equus_caballus
ENSKMAG00000021880	-	78	52.778	ENSEEUG00000004549	RBFOX2	100	53.030	Erinaceus_europaeus
ENSKMAG00000021880	-	100	69.421	ENSELUG00000009404	-	100	69.628	Esox_lucius
ENSKMAG00000021880	-	64	67.667	ENSELUG00000000102	rbfox2	100	78.243	Esox_lucius
ENSKMAG00000021880	-	91	56.522	ENSFCAG00000010061	RBFOX2	96	56.681	Felis_catus
ENSKMAG00000021880	-	72	61.326	ENSFALG00000013111	RBFOX2	78	66.981	Ficedula_albicollis
ENSKMAG00000021880	-	57	47.987	ENSFDAG00000006204	RBFOX2	77	46.980	Fukomys_damarensis
ENSKMAG00000021880	-	100	91.048	ENSFHEG00000010546	rbfox2	100	89.956	Fundulus_heteroclitus
ENSKMAG00000021880	-	78	69.841	ENSGMOG00000005278	rbfox2	99	68.229	Gadus_morhua
ENSKMAG00000021880	-	55	53.901	ENSGALG00000012540	RBFOX2	54	64.953	Gallus_gallus
ENSKMAG00000021880	-	54	59.438	ENSGAFG00000017428	-	95	60.000	Gambusia_affinis
ENSKMAG00000021880	-	79	76.276	ENSGACG00000015968	rbfox2	98	79.920	Gasterosteus_aculeatus
ENSKMAG00000021880	-	78	62.694	ENSGACG00000007174	-	98	62.402	Gasterosteus_aculeatus
ENSKMAG00000021880	-	72	61.326	ENSGAGG00000025884	RBFOX2	79	66.981	Gopherus_agassizii
ENSKMAG00000021880	-	91	56.893	ENSGGOG00000037332	RBFOX2	96	56.522	Gorilla_gorilla
ENSKMAG00000021880	-	100	70.664	ENSHBUG00000000856	-	100	71.489	Haplochromis_burtoni
ENSKMAG00000021880	-	100	90.591	ENSHBUG00000004356	rbfox2	99	93.925	Haplochromis_burtoni
ENSKMAG00000021880	-	94	54.701	ENSHGLG00000012907	RBFOX2	99	59.113	Heterocephalus_glaber_female
ENSKMAG00000021880	-	72	61.475	ENSHGLG00100009986	RBFOX2	73	70.470	Heterocephalus_glaber_male
ENSKMAG00000021880	-	100	70.236	ENSHCOG00000005662	-	100	68.856	Hippocampus_comes
ENSKMAG00000021880	-	100	86.463	ENSHCOG00000016102	rbfox2	100	87.118	Hippocampus_comes
ENSKMAG00000021880	-	100	71.949	ENSIPUG00000016896	rbfox2	99	80.277	Ictalurus_punctatus
ENSKMAG00000021880	-	71	60.606	ENSSTOG00000014841	RBFOX2	79	65.615	Ictidomys_tridecemlineatus
ENSKMAG00000021880	-	71	60.111	ENSJJAG00000014885	Rbfox2	79	64.984	Jaculus_jaculus
ENSKMAG00000021880	-	72	56.486	ENSLACG00000003339	RBFOX2	91	56.216	Latimeria_chalumnae
ENSKMAG00000021880	-	72	60.109	ENSLAFG00000027140	RBFOX2	81	65.217	Loxodonta_africana
ENSKMAG00000021880	-	91	55.752	ENSMFAG00000031994	RBFOX2	96	59.459	Macaca_fascicularis
ENSKMAG00000021880	-	72	61.878	ENSMMUG00000014010	RBFOX2	84	67.296	Macaca_mulatta
ENSKMAG00000021880	-	91	55.482	ENSMNEG00000034388	RBFOX2	97	57.805	Macaca_nemestrina
ENSKMAG00000021880	-	81	59.611	ENSMLEG00000005854	RBFOX2	100	59.124	Mandrillus_leucophaeus
ENSKMAG00000021880	-	100	90.632	ENSMAMG00000004293	rbfox2	100	89.978	Mastacembelus_armatus
ENSKMAG00000021880	-	100	67.167	ENSMAMG00000008980	-	100	68.511	Mastacembelus_armatus
ENSKMAG00000021880	-	100	90.308	ENSMZEG00005023838	rbfox2	97	95.467	Maylandia_zebra
ENSKMAG00000021880	-	100	70.021	ENSMZEG00005004959	-	100	70.851	Maylandia_zebra
ENSKMAG00000021880	-	78	59.079	ENSMAUG00000018816	Rbfox2	79	65.615	Mesocricetus_auratus
ENSKMAG00000021880	-	94	56.237	ENSMICG00000035417	RBFOX2	100	56.025	Microcebus_murinus
ENSKMAG00000021880	-	61	43.087	ENSMICG00000046341	-	50	52.336	Microcebus_murinus
ENSKMAG00000021880	-	71	60.388	ENSMOCG00000009327	Rbfox2	79	65.615	Microtus_ochrogaster
ENSKMAG00000021880	-	72	65.608	ENSMMOG00000008287	rbfox2	100	80.769	Mola_mola
ENSKMAG00000021880	-	72	58.667	ENSMODG00000001122	RBFOX2	76	67.857	Monodelphis_domestica
ENSKMAG00000021880	-	51	96.170	ENSMALG00000000623	rbfox2	100	96.170	Monopterus_albus
ENSKMAG00000021880	-	91	55.824	MGP_CAROLIEiJ_G0019957	Rbfox2	96	56.360	Mus_caroli
ENSKMAG00000021880	-	91	56.304	ENSMUSG00000033565	Rbfox2	96	56.087	Mus_musculus
ENSKMAG00000021880	-	91	56.360	MGP_PahariEiJ_G0019967	Rbfox2	96	56.264	Mus_pahari
ENSKMAG00000021880	-	91	55.824	MGP_SPRETEiJ_G0020860	Rbfox2	96	56.360	Mus_spretus
ENSKMAG00000021880	-	81	59.367	ENSMPUG00000012555	RBFOX2	97	59.124	Mustela_putorius_furo
ENSKMAG00000021880	-	81	58.696	ENSMLUG00000002676	RBFOX2	98	58.454	Myotis_lucifugus
ENSKMAG00000021880	-	62	65.705	ENSNGAG00000020528	Rbfox2	78	65.300	Nannospalax_galili
ENSKMAG00000021880	-	85	71.574	ENSNBRG00000001568	-	90	71.827	Neolamprologus_brichardi
ENSKMAG00000021880	-	100	91.703	ENSNBRG00000018155	rbfox2	100	89.301	Neolamprologus_brichardi
ENSKMAG00000021880	-	85	58.741	ENSNLEG00000034979	RBFOX2	100	58.275	Nomascus_leucogenys
ENSKMAG00000021880	-	81	56.204	ENSMEUG00000001547	RBFOX2	100	55.474	Notamacropus_eugenii
ENSKMAG00000021880	-	82	83.146	ENSOPRG00000014878	RBFOX2	81	83.146	Ochotona_princeps
ENSKMAG00000021880	-	91	56.455	ENSODEG00000009937	RBFOX2	96	56.987	Octodon_degus
ENSKMAG00000021880	-	78	62.129	ENSONIG00000008341	-	96	64.677	Oreochromis_niloticus
ENSKMAG00000021880	-	81	81.373	ENSONIG00000017998	rbfox2	99	79.902	Oreochromis_niloticus
ENSKMAG00000021880	-	57	55.973	ENSOANG00000007489	RBFOX2	67	66.667	Ornithorhynchus_anatinus
ENSKMAG00000021880	-	81	51.338	ENSOCUG00000001349	RBFOX2	97	51.582	Oryctolagus_cuniculus
ENSKMAG00000021880	-	100	71.030	ENSORLG00000014948	-	100	71.702	Oryzias_latipes
ENSKMAG00000021880	-	100	88.596	ENSORLG00000028082	rbfox2	100	89.035	Oryzias_latipes
ENSKMAG00000021880	-	100	70.815	ENSORLG00020005676	-	100	71.702	Oryzias_latipes_hni
ENSKMAG00000021880	-	100	88.596	ENSORLG00020008976	rbfox2	100	89.035	Oryzias_latipes_hni
ENSKMAG00000021880	-	100	71.245	ENSORLG00015000797	-	100	72.128	Oryzias_latipes_hsok
ENSKMAG00000021880	-	100	88.596	ENSORLG00015007027	rbfox2	100	89.035	Oryzias_latipes_hsok
ENSKMAG00000021880	-	100	91.466	ENSOMEG00000015966	rbfox2	100	91.466	Oryzias_melastigma
ENSKMAG00000021880	-	100	70.878	ENSOMEG00000007909	-	100	71.550	Oryzias_melastigma
ENSKMAG00000021880	-	72	60.822	ENSOGAG00000033250	RBFOX2	92	61.096	Otolemur_garnettii
ENSKMAG00000021880	-	72	59.066	ENSOARG00000018669	RBFOX2	91	59.341	Ovis_aries
ENSKMAG00000021880	-	84	58.865	ENSPPAG00000035653	RBFOX2	99	58.392	Pan_paniscus
ENSKMAG00000021880	-	91	56.739	ENSPPRG00000015635	RBFOX2	96	56.897	Panthera_pardus
ENSKMAG00000021880	-	72	61.202	ENSPTIG00000019147	RBFOX2	91	56.787	Panthera_tigris_altaica
ENSKMAG00000021880	-	91	56.893	ENSPTRG00000014305	RBFOX2	96	56.522	Pan_troglodytes
ENSKMAG00000021880	-	91	56.674	ENSPANG00000007030	RBFOX2	97	57.805	Papio_anubis
ENSKMAG00000021880	-	100	65.944	ENSPKIG00000006854	-	100	65.000	Paramormyrops_kingsleyae
ENSKMAG00000021880	-	78	61.316	ENSPKIG00000010816	-	99	60.526	Paramormyrops_kingsleyae
ENSKMAG00000021880	-	72	61.326	ENSPSIG00000017828	RBFOX2	79	66.981	Pelodiscus_sinensis
ENSKMAG00000021880	-	51	90.213	ENSPMGG00000007138	rbfox2	100	91.064	Periophthalmus_magnuspinnatus
ENSKMAG00000021880	-	64	70.990	ENSPMGG00000016969	-	87	71.724	Periophthalmus_magnuspinnatus
ENSKMAG00000021880	-	71	60.388	ENSPEMG00000012542	Rbfox2	79	65.615	Peromyscus_maniculatus_bairdii
ENSKMAG00000021880	-	82	58.881	ENSPCIG00000021550	RBFOX2	94	58.578	Phascolarctos_cinereus
ENSKMAG00000021880	-	100	89.934	ENSPFOG00000014209	rbfox2	100	91.685	Poecilia_formosa
ENSKMAG00000021880	-	69	72.188	ENSPFOG00000001869	-	100	67.354	Poecilia_formosa
ENSKMAG00000021880	-	51	96.137	ENSPLAG00000017308	rbfox2	99	96.137	Poecilia_latipinna
ENSKMAG00000021880	-	51	77.917	ENSPLAG00000002710	-	100	79.835	Poecilia_latipinna
ENSKMAG00000021880	-	51	97.447	ENSPMEG00000007320	rbfox2	100	97.447	Poecilia_mexicana
ENSKMAG00000021880	-	51	78.838	ENSPMEG00000013663	-	100	79.508	Poecilia_mexicana
ENSKMAG00000021880	-	51	95.339	ENSPREG00000012955	rbfox2	100	95.339	Poecilia_reticulata
ENSKMAG00000021880	-	91	56.893	ENSPPYG00000011766	RBFOX2	96	56.522	Pongo_abelii
ENSKMAG00000021880	-	72	57.182	ENSPCOG00000016273	RBFOX2	92	56.787	Propithecus_coquereli
ENSKMAG00000021880	-	51	67.416	ENSPVAG00000015844	RBFOX2	66	67.041	Pteropus_vampyrus
ENSKMAG00000021880	-	100	90.611	ENSPNYG00000016161	rbfox2	100	89.738	Pundamilia_nyererei
ENSKMAG00000021880	-	100	71.092	ENSPNYG00000020595	-	100	71.702	Pundamilia_nyererei
ENSKMAG00000021880	-	99	59.483	ENSPNAG00000014196	-	100	57.667	Pygocentrus_nattereri
ENSKMAG00000021880	-	100	70.538	ENSPNAG00000000168	rbfox2	100	71.183	Pygocentrus_nattereri
ENSKMAG00000021880	-	81	58.128	ENSRNOG00000004688	Rbfox2	97	57.882	Rattus_norvegicus
ENSKMAG00000021880	-	72	61.219	ENSRBIG00000033696	RBFOX2	79	67.722	Rhinopithecus_bieti
ENSKMAG00000021880	-	91	56.893	ENSRROG00000035715	RBFOX2	96	56.522	Rhinopithecus_roxellana
ENSKMAG00000021880	-	81	59.360	ENSSBOG00000028291	RBFOX2	99	59.214	Saimiri_boliviensis_boliviensis
ENSKMAG00000021880	-	81	59.069	ENSSHAG00000006835	RBFOX2	97	58.333	Sarcophilus_harrisii
ENSKMAG00000021880	-	100	65.739	ENSSFOG00015010482	-	99	72.162	Scleropages_formosus
ENSKMAG00000021880	-	52	73.418	ENSSFOG00015013291	-	76	72.103	Scleropages_formosus
ENSKMAG00000021880	-	100	88.646	ENSSMAG00000013662	rbfox2	100	88.696	Scophthalmus_maximus
ENSKMAG00000021880	-	100	70.975	ENSSMAG00000004317	-	100	70.276	Scophthalmus_maximus
ENSKMAG00000021880	-	100	70.815	ENSSDUG00000009511	-	100	71.915	Seriola_dumerili
ENSKMAG00000021880	-	100	92.560	ENSSDUG00000004292	rbfox2	100	92.560	Seriola_dumerili
ENSKMAG00000021880	-	100	71.092	ENSSLDG00000018052	-	100	71.915	Seriola_lalandi_dorsalis
ENSKMAG00000021880	-	85	91.003	ENSSLDG00000023983	rbfox2	83	91.003	Seriola_lalandi_dorsalis
ENSKMAG00000021880	-	54	55.124	ENSSPUG00000011797	RBFOX2	56	65.094	Sphenodon_punctatus
ENSKMAG00000021880	-	100	71.520	ENSSPAG00000016272	-	100	72.553	Stegastes_partitus
ENSKMAG00000021880	-	100	92.140	ENSSPAG00000013681	rbfox2	100	89.956	Stegastes_partitus
ENSKMAG00000021880	-	81	59.951	ENSSSCG00000000152	RBFOX2	96	59.459	Sus_scrofa
ENSKMAG00000021880	-	72	61.326	ENSTGUG00000010808	RBFOX2	81	66.981	Taeniopygia_guttata
ENSKMAG00000021880	-	78	59.367	ENSTRUG00000007739	-	74	65.836	Takifugu_rubripes
ENSKMAG00000021880	-	57	77.037	ENSTBEG00000003297	-	58	90.000	Tupaia_belangeri
ENSKMAG00000021880	-	81	59.611	ENSTTRG00000006922	RBFOX2	100	59.124	Tursiops_truncatus
ENSKMAG00000021880	-	69	59.718	ENSUAMG00000010612	RBFOX2	76	64.952	Ursus_americanus
ENSKMAG00000021880	-	57	56.655	ENSUMAG00000016785	RBFOX2	56	67.111	Ursus_maritimus
ENSKMAG00000021880	-	81	54.390	ENSVPAG00000002824	RBFOX2	100	53.902	Vicugna_pacos
ENSKMAG00000021880	-	82	58.881	ENSVVUG00000023561	RBFOX2	98	58.881	Vulpes_vulpes
ENSKMAG00000021880	-	72	61.433	ENSXETG00000000231	rbfox2	92	61.433	Xenopus_tropicalis
ENSKMAG00000021880	-	58	83.721	ENSXCOG00000015905	-	97	57.022	Xiphophorus_couchianus
ENSKMAG00000021880	-	78	95.798	ENSXMAG00000029498	rbfox2	90	95.798	Xiphophorus_maculatus
ENSKMAG00000021880	-	100	71.030	ENSXMAG00000026769	-	100	71.215	Xiphophorus_maculatus