EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000021938 (Gene tree)
Gene ID: 108241575
Gene Symbol: fip1l1b
Alias: fip1l1|wu:fd36f11|zgc:103421
Full Name: pre-mRNA 3'-end-processing factor FIP1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 10084 bases
Position: chrLWHD01000087.1:840890-850973
Accession: 108241575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000029628	Fip1	PF05182.13	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000029996	-	2111	XM_017425844	ENSKMAP00000029628	541 (aa)	XP_017281333	UPI0007F8BE54

Gene Model

Click here to download ENSKMAG00000021938's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021938	fip1l1b	70	95.833	ENSACIG00000001454	fip1l1b	96	95.833	Amphilophus_citrinellus
ENSKMAG00000021938	fip1l1b	100	84.973	ENSAOCG00000021043	fip1l1b	100	84.973	Amphiprion_ocellaris
ENSKMAG00000021938	fip1l1b	100	84.973	ENSAPEG00000022229	fip1l1b	100	84.973	Amphiprion_percula
ENSKMAG00000021938	fip1l1b	100	87.431	ENSATEG00000021757	fip1l1b	100	87.431	Anabas_testudineus
ENSKMAG00000021938	fip1l1b	88	54.113	ENSAPLG00000003042	-	90	56.262	Anas_platyrhynchos
ENSKMAG00000021938	fip1l1b	68	70.779	ENSACAG00000010556	-	89	55.159	Anolis_carolinensis
ENSKMAG00000021938	fip1l1b	100	89.094	ENSACLG00000010418	fip1l1b	100	89.094	Astatotilapia_calliptera
ENSKMAG00000021938	fip1l1b	100	69.258	ENSAMXG00000011126	fip1l1b	89	70.650	Astyanax_mexicanus
ENSKMAG00000021938	fip1l1b	60	41.615	ENSAMXG00000031045	fip1l1a	83	40.411	Astyanax_mexicanus
ENSKMAG00000021938	fip1l1b	83	61.354	ENSBTAG00000020653	FIP1L1	99	59.964	Bos_taurus
ENSKMAG00000021938	fip1l1b	83	58.420	ENSCHIG00000025903	-	99	57.565	Capra_hircus
ENSKMAG00000021938	fip1l1b	71	69.802	ENSCAPG00000009569	-	82	59.514	Cavia_aperea
ENSKMAG00000021938	fip1l1b	83	61.488	ENSCPOG00000010770	-	86	65.864	Cavia_porcellus
ENSKMAG00000021938	fip1l1b	50	53.214	ENSCPBG00000014849	-	51	51.361	Chrysemys_picta_bellii
ENSKMAG00000021938	fip1l1b	99	59.514	ENSCPBG00000025019	-	97	58.156	Chrysemys_picta_bellii
ENSKMAG00000021938	fip1l1b	99	55.851	ENSCGRG00001018568	Fip1l1	99	58.156	Cricetulus_griseus_chok1gshd
ENSKMAG00000021938	fip1l1b	99	55.851	ENSCGRG00000000208	Fip1l1	99	58.156	Cricetulus_griseus_crigri
ENSKMAG00000021938	fip1l1b	100	84.317	ENSCSEG00000006583	fip1l1b	100	84.317	Cynoglossus_semilaevis
ENSKMAG00000021938	fip1l1b	100	86.137	ENSCVAG00000023435	fip1l1b	100	86.137	Cyprinodon_variegatus
ENSKMAG00000021938	fip1l1b	87	40.741	ENSDARG00000043328	fip1l1a	50	42.244	Danio_rerio
ENSKMAG00000021938	fip1l1b	100	66.495	ENSDARG00000070431	fip1l1b	100	65.976	Danio_rerio
ENSKMAG00000021938	fip1l1b	80	50.299	ENSETEG00000018271	-	89	53.693	Echinops_telfairi
ENSKMAG00000021938	fip1l1b	83	56.042	ENSEASG00005019566	-	99	57.350	Equus_asinus_asinus
ENSKMAG00000021938	fip1l1b	99	50.181	ENSELUG00000004607	fip1l1a	99	53.102	Esox_lucius
ENSKMAG00000021938	fip1l1b	100	85.610	ENSFHEG00000003843	fip1l1b	100	85.610	Fundulus_heteroclitus
ENSKMAG00000021938	fip1l1b	100	68.126	ENSGMOG00000004913	fip1l1b	100	67.951	Gadus_morhua
ENSKMAG00000021938	fip1l1b	99	60.289	ENSGALG00000013943	-	99	60.289	Gallus_gallus
ENSKMAG00000021938	fip1l1b	100	85.714	ENSGAFG00000008253	fip1l1b	100	85.921	Gambusia_affinis
ENSKMAG00000021938	fip1l1b	100	68.977	ENSGACG00000015946	fip1l1b	100	68.977	Gasterosteus_aculeatus
ENSKMAG00000021938	fip1l1b	51	50.890	ENSGAGG00000017677	-	57	58.095	Gopherus_agassizii
ENSKMAG00000021938	fip1l1b	99	59.514	ENSGAGG00000009763	-	97	57.979	Gopherus_agassizii
ENSKMAG00000021938	fip1l1b	100	89.094	ENSHBUG00000013978	fip1l1b	100	89.094	Haplochromis_burtoni
ENSKMAG00000021938	fip1l1b	99	78.938	ENSHCOG00000015834	fip1l1b	99	81.136	Hippocampus_comes
ENSKMAG00000021938	fip1l1b	100	56.591	ENSIPUG00000022454	fip1l1b	100	66.667	Ictalurus_punctatus
ENSKMAG00000021938	fip1l1b	100	80.893	ENSLBEG00000028819	fip1l1b	100	80.714	Labrus_bergylta
ENSKMAG00000021938	fip1l1b	96	61.248	ENSLACG00000011991	fip1l1a	96	61.869	Latimeria_chalumnae
ENSKMAG00000021938	fip1l1b	97	40.404	ENSLOCG00000015223	-	85	42.400	Lepisosteus_oculatus
ENSKMAG00000021938	fip1l1b	99	62.241	ENSLOCG00000014127	fip1l1b	99	62.867	Lepisosteus_oculatus
ENSKMAG00000021938	fip1l1b	100	87.085	ENSMAMG00000004535	fip1l1b	100	87.085	Mastacembelus_armatus
ENSKMAG00000021938	fip1l1b	100	88.909	ENSMZEG00005023828	fip1l1b	100	88.909	Maylandia_zebra
ENSKMAG00000021938	fip1l1b	86	53.507	ENSMAUG00000010526	Fip1l1	99	55.497	Mesocricetus_auratus
ENSKMAG00000021938	fip1l1b	99	53.912	ENSMOCG00000008020	Fip1l1	99	56.206	Microtus_ochrogaster
ENSKMAG00000021938	fip1l1b	81	96.154	ENSMMOG00000008262	fip1l1b	92	96.154	Mola_mola
ENSKMAG00000021938	fip1l1b	59	54.865	ENSMODG00000020654	-	93	50.000	Monodelphis_domestica
ENSKMAG00000021938	fip1l1b	100	64.695	ENSMALG00000000838	fip1l1b	53	65.657	Monopterus_albus
ENSKMAG00000021938	fip1l1b	83	60.566	MGP_CAROLIEiJ_G0027304	Fip1l1	99	57.979	Mus_caroli
ENSKMAG00000021938	fip1l1b	83	60.566	ENSMUSG00000029227	Fip1l1	99	57.979	Mus_musculus
ENSKMAG00000021938	fip1l1b	83	60.566	MGP_PahariEiJ_G0017085	Fip1l1	99	57.979	Mus_pahari
ENSKMAG00000021938	fip1l1b	83	60.566	MGP_SPRETEiJ_G0028299	Fip1l1	99	57.979	Mus_spretus
ENSKMAG00000021938	fip1l1b	83	61.269	ENSNGAG00000008849	Fip1l1	99	58.185	Nannospalax_galili
ENSKMAG00000021938	fip1l1b	100	86.225	ENSNBRG00000017832	fip1l1b	100	86.225	Neolamprologus_brichardi
ENSKMAG00000021938	fip1l1b	100	85.331	ENSONIG00000008785	fip1l1b	100	85.331	Oreochromis_niloticus
ENSKMAG00000021938	fip1l1b	83	50.478	ENSOANG00000003384	-	90	49.049	Ornithorhynchus_anatinus
ENSKMAG00000021938	fip1l1b	100	85.978	ENSORLG00000004397	fip1l1b	100	85.978	Oryzias_latipes
ENSKMAG00000021938	fip1l1b	100	86.162	ENSORLG00020008716	fip1l1b	100	85.793	Oryzias_latipes_hni
ENSKMAG00000021938	fip1l1b	100	86.162	ENSORLG00015006736	fip1l1b	100	86.162	Oryzias_latipes_hsok
ENSKMAG00000021938	fip1l1b	100	57.522	ENSOMEG00000015730	fip1l1b	97	80.226	Oryzias_melastigma
ENSKMAG00000021938	fip1l1b	50	47.535	ENSPKIG00000014162	-	84	45.435	Paramormyrops_kingsleyae
ENSKMAG00000021938	fip1l1b	100	69.107	ENSPMGG00000017028	fip1l1b	100	68.078	Periophthalmus_magnuspinnatus
ENSKMAG00000021938	fip1l1b	86	57.645	ENSPEMG00000002025	Fip1l1	99	59.140	Peromyscus_maniculatus_bairdii
ENSKMAG00000021938	fip1l1b	100	85.481	ENSPFOG00000014745	fip1l1b	100	85.507	Poecilia_formosa
ENSKMAG00000021938	fip1l1b	100	82.790	ENSPLAG00000010954	fip1l1b	100	85.895	Poecilia_latipinna
ENSKMAG00000021938	fip1l1b	100	85.481	ENSPMEG00000019187	fip1l1b	100	85.507	Poecilia_mexicana
ENSKMAG00000021938	fip1l1b	83	67.411	ENSPREG00000012535	fip1l1b	90	67.411	Poecilia_reticulata
ENSKMAG00000021938	fip1l1b	56	86.025	ENSPNYG00000015976	fip1l1b	99	87.105	Pundamilia_nyererei
ENSKMAG00000021938	fip1l1b	56	69.565	ENSPNAG00000015341	fip1l1b	71	69.231	Pygocentrus_nattereri
ENSKMAG00000021938	fip1l1b	62	45.104	ENSPNAG00000009853	fip1l1a	60	52.113	Pygocentrus_nattereri
ENSKMAG00000021938	fip1l1b	52	43.643	ENSPNAG00000007456	-	86	38.797	Pygocentrus_nattereri
ENSKMAG00000021938	fip1l1b	83	58.170	ENSRNOG00000002275	Fip1l1	99	56.383	Rattus_norvegicus
ENSKMAG00000021938	fip1l1b	83	52.250	ENSSHAG00000015789	-	86	56.556	Sarcophilus_harrisii
ENSKMAG00000021938	fip1l1b	53	49.158	ENSSFOG00015010948	-	59	54.955	Scleropages_formosus
ENSKMAG00000021938	fip1l1b	91	61.644	ENSSFOG00015017653	fip1l1b	95	58.907	Scleropages_formosus
ENSKMAG00000021938	fip1l1b	100	85.609	ENSSMAG00000013444	fip1l1b	100	85.424	Scophthalmus_maximus
ENSKMAG00000021938	fip1l1b	100	88.540	ENSSDUG00000004117	fip1l1b	100	88.540	Seriola_dumerili
ENSKMAG00000021938	fip1l1b	100	87.985	ENSSLDG00000024099	fip1l1b	100	87.800	Seriola_lalandi_dorsalis
ENSKMAG00000021938	fip1l1b	69	55.020	ENSSARG00000001973	-	89	59.585	Sorex_araneus
ENSKMAG00000021938	fip1l1b	100	85.689	ENSSPAG00000017564	fip1l1b	100	85.689	Stegastes_partitus
ENSKMAG00000021938	fip1l1b	100	83.088	ENSTRUG00000001545	fip1l1b	100	83.456	Takifugu_rubripes
ENSKMAG00000021938	fip1l1b	100	73.993	ENSTNIG00000004104	fip1l1b	100	73.993	Tetraodon_nigroviridis
ENSKMAG00000021938	fip1l1b	69	55.742	ENSUMAG00000002758	-	91	60.208	Ursus_maritimus
ENSKMAG00000021938	fip1l1b	69	55.020	ENSVPAG00000011574	-	76	59.585	Vicugna_pacos
ENSKMAG00000021938	fip1l1b	80	64.758	ENSXETG00000011679	fip1l1	90	58.029	Xenopus_tropicalis
ENSKMAG00000021938	fip1l1b	100	65.385	ENSXCOG00000013656	fip1l1b	95	70.694	Xiphophorus_couchianus
ENSKMAG00000021938	fip1l1b	100	84.936	ENSXMAG00000017620	fip1l1b	100	85.118	Xiphophorus_maculatus