EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000021982 (Gene tree)
Gene ID: 108251452
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 28178 bases
Position: chrLWHD01000882.1:1510-29687
Accession: 108251452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000029707	AARP2CN	PF08142.12	4.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000030075	-	2388	XM_017441770	ENSKMAP00000029707	791 (aa)	XP_017297259	-

Gene Model

Click here to download ENSKMAG00000021982's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000021982's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000021982	bms1	91	67.191	ENSG00000165733	BMS1	58	63.475	Homo_sapiens
ENSKMAG00000021982	bms1	78	73.594	ENSAPOG00000002296	bms1	60	74.729	Acanthochromis_polyacanthus
ENSKMAG00000021982	bms1	81	73.288	ENSAMEG00000016834	BMS1	62	62.312	Ailuropoda_melanoleuca
ENSKMAG00000021982	bms1	97	71.201	ENSACIG00000002588	bms1	66	71.638	Amphilophus_citrinellus
ENSKMAG00000021982	bms1	97	74.532	ENSAOCG00000018088	bms1	66	76.904	Amphiprion_ocellaris
ENSKMAG00000021982	bms1	97	74.718	ENSAPEG00000014673	bms1	66	77.222	Amphiprion_percula
ENSKMAG00000021982	bms1	97	73.908	ENSATEG00000023465	bms1	66	74.906	Anabas_testudineus
ENSKMAG00000021982	bms1	90	67.052	ENSAPLG00000003759	BMS1	59	66.855	Anas_platyrhynchos
ENSKMAG00000021982	bms1	96	64.860	ENSACAG00000004537	-	57	65.672	Anolis_carolinensis
ENSKMAG00000021982	bms1	94	63.441	ENSANAG00000023432	BMS1	58	63.750	Aotus_nancymaae
ENSKMAG00000021982	bms1	97	75.416	ENSACLG00000001294	bms1	65	76.312	Astatotilapia_calliptera
ENSKMAG00000021982	bms1	80	78.738	ENSAMXG00000011236	bms1	59	72.253	Astyanax_mexicanus
ENSKMAG00000021982	bms1	96	66.154	ENSBTAG00000012878	BMS1	56	66.417	Bos_taurus
ENSKMAG00000021982	bms1	75	54.523	WBGene00022021	Y61A9LA.10	55	54.271	Caenorhabditis_elegans
ENSKMAG00000021982	bms1	91	66.601	ENSCJAG00000021705	BMS1	58	63.604	Callithrix_jacchus
ENSKMAG00000021982	bms1	93	67.118	ENSCAFG00000007114	BMS1	56	65.348	Canis_familiaris
ENSKMAG00000021982	bms1	93	67.118	ENSCAFG00020025282	BMS1	56	65.348	Canis_lupus_dingo
ENSKMAG00000021982	bms1	96	66.279	ENSCHIG00000023251	BMS1	56	65.613	Capra_hircus
ENSKMAG00000021982	bms1	96	63.082	ENSCAPG00000008652	BMS1	64	64.943	Cavia_aperea
ENSKMAG00000021982	bms1	96	63.701	ENSCPOG00000000502	BMS1	62	66.219	Cavia_porcellus
ENSKMAG00000021982	bms1	96	50.459	ENSCCAG00000024969	-	57	53.202	Cebus_capucinus
ENSKMAG00000021982	bms1	96	60.403	ENSCATG00000030625	-	63	62.697	Cercocebus_atys
ENSKMAG00000021982	bms1	73	53.563	ENSCATG00000008695	-	58	50.318	Cercocebus_atys
ENSKMAG00000021982	bms1	90	67.052	ENSCLAG00000002446	BMS1	56	66.667	Chinchilla_lanigera
ENSKMAG00000021982	bms1	91	66.148	ENSCSAG00000011118	BMS1	58	62.963	Chlorocebus_sabaeus
ENSKMAG00000021982	bms1	96	59.799	ENSCHOG00000011055	BMS1	57	65.666	Choloepus_hoffmanni
ENSKMAG00000021982	bms1	89	67.836	ENSCPBG00000025581	BMS1	55	65.250	Chrysemys_picta_bellii
ENSKMAG00000021982	bms1	75	62.341	ENSCING00000003181	-	58	60.048	Ciona_intestinalis
ENSKMAG00000021982	bms1	95	63.750	ENSCANG00000011609	BMS1	58	63.441	Colobus_angolensis_palliatus
ENSKMAG00000021982	bms1	95	66.998	ENSCGRG00001019461	Bms1	57	66.920	Cricetulus_griseus_chok1gshd
ENSKMAG00000021982	bms1	95	66.998	ENSCGRG00000009016	Bms1	62	62.290	Cricetulus_griseus_crigri
ENSKMAG00000021982	bms1	95	69.365	ENSCSEG00000002469	bms1	66	69.438	Cynoglossus_semilaevis
ENSKMAG00000021982	bms1	95	75.526	ENSCVAG00000008371	bms1	65	77.308	Cyprinodon_variegatus
ENSKMAG00000021982	bms1	90	74.219	ENSDARG00000054154	bms1	96	72.523	Danio_rerio
ENSKMAG00000021982	bms1	90	66.602	ENSDNOG00000015761	BMS1	56	66.540	Dasypus_novemcinctus
ENSKMAG00000021982	bms1	94	63.082	ENSDORG00000002982	Bms1	58	63.899	Dipodomys_ordii
ENSKMAG00000021982	bms1	78	59.705	FBgn0036686	CG7728	64	43.797	Drosophila_melanogaster
ENSKMAG00000021982	bms1	96	65.430	ENSETEG00000009554	BMS1	59	64.962	Echinops_telfairi
ENSKMAG00000021982	bms1	92	66.795	ENSEASG00005006894	BMS1	59	65.607	Equus_asinus_asinus
ENSKMAG00000021982	bms1	96	65.116	ENSECAG00000001358	BMS1	61	63.815	Equus_caballus
ENSKMAG00000021982	bms1	96	65.309	ENSELUG00000001756	bms1	75	85.440	Esox_lucius
ENSKMAG00000021982	bms1	96	56.259	ENSFCAG00000011220	BMS1	56	66.160	Felis_catus
ENSKMAG00000021982	bms1	91	66.294	ENSFALG00000006882	BMS1	56	66.479	Ficedula_albicollis
ENSKMAG00000021982	bms1	96	54.366	ENSFDAG00000001422	BMS1	62	66.092	Fukomys_damarensis
ENSKMAG00000021982	bms1	97	77.922	ENSFHEG00000003367	bms1	65	77.922	Fundulus_heteroclitus
ENSKMAG00000021982	bms1	95	64.089	ENSGMOG00000000718	bms1	64	63.063	Gadus_morhua
ENSKMAG00000021982	bms1	94	63.588	ENSGALG00000002624	BMS1	56	66.855	Gallus_gallus
ENSKMAG00000021982	bms1	70	86.986	ENSGAFG00000009067	bms1	96	74.524	Gambusia_affinis
ENSKMAG00000021982	bms1	95	75.046	ENSGACG00000015334	bms1	56	76.155	Gasterosteus_aculeatus
ENSKMAG00000021982	bms1	95	62.590	ENSGAGG00000003467	BMS1	57	65.918	Gopherus_agassizii
ENSKMAG00000021982	bms1	97	75.353	ENSHBUG00000022628	bms1	65	76.154	Haplochromis_burtoni
ENSKMAG00000021982	bms1	96	64.065	ENSHGLG00000000477	BMS1	56	65.774	Heterocephalus_glaber_female
ENSKMAG00000021982	bms1	96	64.130	ENSHGLG00100002176	BMS1	56	65.774	Heterocephalus_glaber_male
ENSKMAG00000021982	bms1	96	73.263	ENSHCOG00000017604	bms1	64	72.917	Hippocampus_comes
ENSKMAG00000021982	bms1	97	61.865	ENSIPUG00000017855	bms1	67	63.626	Ictalurus_punctatus
ENSKMAG00000021982	bms1	94	67.191	ENSSTOG00000015063	BMS1	58	64.801	Ictidomys_tridecemlineatus
ENSKMAG00000021982	bms1	81	73.394	ENSJJAG00000017328	Bms1	57	66.229	Jaculus_jaculus
ENSKMAG00000021982	bms1	97	70.000	ENSLBEG00000028208	bms1	65	70.923	Labrus_bergylta
ENSKMAG00000021982	bms1	91	64.259	ENSLACG00000001600	BMS1	56	64.783	Latimeria_chalumnae
ENSKMAG00000021982	bms1	93	63.764	ENSLOCG00000012914	bms1	66	63.412	Lepisosteus_oculatus
ENSKMAG00000021982	bms1	94	66.603	ENSLAFG00000006250	BMS1	56	65.714	Loxodonta_africana
ENSKMAG00000021982	bms1	79	67.123	ENSMFAG00000037771	BMS1	61	65.913	Macaca_fascicularis
ENSKMAG00000021982	bms1	91	54.921	ENSMMUG00000007426	-	63	52.509	Macaca_mulatta
ENSKMAG00000021982	bms1	85	53.254	ENSMLEG00000029084	-	63	50.808	Mandrillus_leucophaeus
ENSKMAG00000021982	bms1	97	73.325	ENSMAMG00000020855	bms1	65	72.901	Mastacembelus_armatus
ENSKMAG00000021982	bms1	97	75.288	ENSMZEG00005005663	bms1	65	76.184	Maylandia_zebra
ENSKMAG00000021982	bms1	84	66.882	ENSMGAG00000001170	BMS1	54	66.882	Meleagris_gallopavo
ENSKMAG00000021982	bms1	95	66.471	ENSMAUG00000002195	Bms1	62	60.702	Mesocricetus_auratus
ENSKMAG00000021982	bms1	94	65.201	ENSMICG00000009977	BMS1	56	65.844	Microcebus_murinus
ENSKMAG00000021982	bms1	93	65.098	ENSMOCG00000002038	Bms1	59	63.327	Microtus_ochrogaster
ENSKMAG00000021982	bms1	97	74.194	ENSMMOG00000000977	bms1	65	74.031	Mola_mola
ENSKMAG00000021982	bms1	91	65.989	ENSMODG00000001177	BMS1	57	66.852	Monodelphis_domestica
ENSKMAG00000021982	bms1	97	73.611	ENSMALG00000009680	bms1	65	74.460	Monopterus_albus
ENSKMAG00000021982	bms1	89	66.139	ENSMUSG00000030138	Bms1	57	64.750	Mus_musculus
ENSKMAG00000021982	bms1	89	66.203	MGP_PahariEiJ_G0022539	Bms1	57	64.607	Mus_pahari
ENSKMAG00000021982	bms1	89	65.743	MGP_SPRETEiJ_G0029816	Bms1	57	64.140	Mus_spretus
ENSKMAG00000021982	bms1	91	67.698	ENSMPUG00000017276	BMS1	59	64.209	Mustela_putorius_furo
ENSKMAG00000021982	bms1	96	56.535	ENSMLUG00000003260	BMS1	57	65.299	Myotis_lucifugus
ENSKMAG00000021982	bms1	51	58.537	ENSNGAG00000015258	Bms1	63	50.314	Nannospalax_galili
ENSKMAG00000021982	bms1	56	86.067	ENSNBRG00000023627	bms1	100	86.067	Neolamprologus_brichardi
ENSKMAG00000021982	bms1	91	67.188	ENSNLEG00000015791	BMS1	65	63.445	Nomascus_leucogenys
ENSKMAG00000021982	bms1	90	65.769	ENSODEG00000005554	BMS1	57	65.977	Octodon_degus
ENSKMAG00000021982	bms1	97	75.862	ENSONIG00000007227	bms1	65	76.697	Oreochromis_niloticus
ENSKMAG00000021982	bms1	94	67.311	ENSOANG00000000662	-	56	66.856	Ornithorhynchus_anatinus
ENSKMAG00000021982	bms1	91	67.906	ENSOCUG00000005354	BMS1	56	67.304	Oryctolagus_cuniculus
ENSKMAG00000021982	bms1	97	73.935	ENSORLG00000014655	bms1	65	74.386	Oryzias_latipes
ENSKMAG00000021982	bms1	65	77.220	ENSORLG00020016246	bms1	82	77.500	Oryzias_latipes_hni
ENSKMAG00000021982	bms1	64	76.938	ENSORLG00015014183	bms1	91	76.809	Oryzias_latipes_hsok
ENSKMAG00000021982	bms1	97	74.903	ENSOMEG00000015042	bms1	65	75.161	Oryzias_melastigma
ENSKMAG00000021982	bms1	90	65.517	ENSOGAG00000006511	BMS1	56	66.165	Otolemur_garnettii
ENSKMAG00000021982	bms1	96	66.027	ENSOARG00000003900	BMS1	57	64.760	Ovis_aries
ENSKMAG00000021982	bms1	91	66.994	ENSPPAG00000027837	BMS1	59	63.298	Pan_paniscus
ENSKMAG00000021982	bms1	96	65.649	ENSPPRG00000001311	BMS1	56	66.160	Panthera_pardus
ENSKMAG00000021982	bms1	96	65.698	ENSPTIG00000009652	BMS1	57	66.157	Panthera_tigris_altaica
ENSKMAG00000021982	bms1	91	66.798	ENSPTRG00000002441	BMS1	65	63.717	Pan_troglodytes
ENSKMAG00000021982	bms1	93	68.692	ENSPKIG00000008165	bms1	55	71.017	Paramormyrops_kingsleyae
ENSKMAG00000021982	bms1	89	66.797	ENSPSIG00000006481	BMS1	56	67.300	Pelodiscus_sinensis
ENSKMAG00000021982	bms1	51	87.871	ENSPMGG00000012075	bms1	99	87.871	Periophthalmus_magnuspinnatus
ENSKMAG00000021982	bms1	90	66.600	ENSPEMG00000022467	Bms1	59	66.539	Peromyscus_maniculatus_bairdii
ENSKMAG00000021982	bms1	90	67.179	ENSPCIG00000001339	BMS1	56	66.294	Phascolarctos_cinereus
ENSKMAG00000021982	bms1	92	80.113	ENSPFOG00000015180	bms1	66	69.555	Poecilia_formosa
ENSKMAG00000021982	bms1	67	79.362	ENSPLAG00000007150	bms1	90	79.925	Poecilia_latipinna
ENSKMAG00000021982	bms1	97	76.675	ENSPMEG00000023176	bms1	61	76.546	Poecilia_mexicana
ENSKMAG00000021982	bms1	97	75.711	ENSPREG00000002695	bms1	64	75.969	Poecilia_reticulata
ENSKMAG00000021982	bms1	80	66.211	ENSPPYG00000002836	-	85	62.655	Pongo_abelii
ENSKMAG00000021982	bms1	90	65.076	ENSPCAG00000014528	BMS1	55	65.962	Procavia_capensis
ENSKMAG00000021982	bms1	84	66.885	ENSPCOG00000023834	-	52	66.030	Propithecus_coquereli
ENSKMAG00000021982	bms1	96	65.571	ENSPVAG00000000725	BMS1	56	65.019	Pteropus_vampyrus
ENSKMAG00000021982	bms1	97	72.750	ENSPNYG00000018866	bms1	90	79.035	Pundamilia_nyererei
ENSKMAG00000021982	bms1	92	72.340	ENSPNAG00000000676	bms1	58	71.887	Pygocentrus_nattereri
ENSKMAG00000021982	bms1	93	66.797	ENSRNOG00000006576	Bms1	71	63.971	Rattus_norvegicus
ENSKMAG00000021982	bms1	81	69.746	ENSRROG00000040101	BMS1	64	60.612	Rhinopithecus_roxellana
ENSKMAG00000021982	bms1	96	61.093	ENSSBOG00000035778	BMS1	58	63.055	Saimiri_boliviensis_boliviensis
ENSKMAG00000021982	bms1	91	64.534	ENSSHAG00000005062	BMS1	57	65.201	Sarcophilus_harrisii
ENSKMAG00000021982	bms1	94	69.395	ENSSFOG00015022313	bms1	58	71.107	Scleropages_formosus
ENSKMAG00000021982	bms1	97	72.161	ENSSMAG00000019966	bms1	66	73.016	Scophthalmus_maximus
ENSKMAG00000021982	bms1	97	74.413	ENSSDUG00000016875	bms1	90	79.529	Seriola_dumerili
ENSKMAG00000021982	bms1	97	73.620	ENSSLDG00000015199	bms1	66	74.296	Seriola_lalandi_dorsalis
ENSKMAG00000021982	bms1	64	57.073	ENSSARG00000014407	BMS1	52	57.353	Sorex_araneus
ENSKMAG00000021982	bms1	93	66.419	ENSSPUG00000014454	BMS1	55	67.810	Sphenodon_punctatus
ENSKMAG00000021982	bms1	93	67.836	ENSSSCG00000010198	BMS1	58	67.041	Sus_scrofa
ENSKMAG00000021982	bms1	90	66.041	ENSTGUG00000006302	-	56	65.265	Taeniopygia_guttata
ENSKMAG00000021982	bms1	97	66.797	ENSTRUG00000008028	bms1	64	67.315	Takifugu_rubripes
ENSKMAG00000021982	bms1	94	70.909	ENSTNIG00000006216	bms1	56	71.645	Tetraodon_nigroviridis
ENSKMAG00000021982	bms1	90	64.952	ENSTTRG00000007983	BMS1	56	64.607	Tursiops_truncatus
ENSKMAG00000021982	bms1	81	74.134	ENSUAMG00000023996	BMS1	62	62.167	Ursus_americanus
ENSKMAG00000021982	bms1	81	73.624	ENSUMAG00000016523	BMS1	62	62.167	Ursus_maritimus
ENSKMAG00000021982	bms1	93	67.118	ENSVVUG00000021305	BMS1	57	65.348	Vulpes_vulpes
ENSKMAG00000021982	bms1	71	60.816	ENSXETG00000008158	bms1	96	60.174	Xenopus_tropicalis
ENSKMAG00000021982	bms1	97	75.160	ENSXCOG00000000506	bms1	96	88.971	Xiphophorus_couchianus
ENSKMAG00000021982	bms1	97	76.031	ENSXMAG00000014236	bms1	65	76.843	Xiphophorus_maculatus