EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000022093 (Gene tree)
Gene ID: 108232982
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 45680 bases
Position: chrLWHD01000018.1:4142897-4188576
Accession: 108232982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000029874	RRM_1	PF00076.22	7.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000030244	-	5187	XM_017411148	ENSKMAP00000029874	286 (aa)	XP_017266637	UPI0007F87A19

Gene Model

Click here to download ENSKMAG00000022093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000022093's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000022093	-	76	56.054	ENSKMAG00000018265	-	84	51.761
ENSKMAG00000022093	-	95	48.410	ENSKMAG00000011170	-	73	52.000
ENSKMAG00000022093	-	100	72.297	ENSKMAG00000018155	-	100	70.946
ENSKMAG00000022093	-	77	53.846	ENSKMAG00000015656	raly	79	54.299

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000022093	-	100	90.753	ENSAPOG00000008744	-	100	90.068	Acanthochromis_polyacanthus
ENSKMAG00000022093	-	97	81.787	ENSACIG00000007143	-	97	81.100	Amphilophus_citrinellus
ENSKMAG00000022093	-	100	92.123	ENSAOCG00000023599	-	100	91.438	Amphiprion_ocellaris
ENSKMAG00000022093	-	100	72.297	ENSAOCG00000001605	-	100	70.608	Amphiprion_ocellaris
ENSKMAG00000022093	-	88	72.112	ENSATEG00000023356	-	93	73.770	Anabas_testudineus
ENSKMAG00000022093	-	97	82.373	ENSATEG00000022219	-	93	86.102	Anabas_testudineus
ENSKMAG00000022093	-	100	91.438	ENSACLG00000011720	-	100	90.753	Astatotilapia_calliptera
ENSKMAG00000022093	-	100	71.284	ENSACLG00000006949	-	100	69.595	Astatotilapia_calliptera
ENSKMAG00000022093	-	100	63.636	ENSAMXG00000032617	-	100	62.626	Astyanax_mexicanus
ENSKMAG00000022093	-	100	71.284	ENSAMXG00000019031	-	100	70.270	Astyanax_mexicanus
ENSKMAG00000022093	-	100	82.007	ENSCSEG00000014237	-	100	82.007	Cynoglossus_semilaevis
ENSKMAG00000022093	-	100	71.622	ENSCVAG00000018104	-	100	70.608	Cyprinodon_variegatus
ENSKMAG00000022093	-	100	92.123	ENSCVAG00000013624	-	100	91.438	Cyprinodon_variegatus
ENSKMAG00000022093	-	60	76.023	ENSDARG00000090292	ralyl	81	79.012	Danio_rerio
ENSKMAG00000022093	-	93	63.333	ENSELUG00000001702	-	96	63.139	Esox_lucius
ENSKMAG00000022093	-	58	72.727	ENSGMOG00000005914	-	100	72.727	Gadus_morhua
ENSKMAG00000022093	-	62	79.213	ENSGACG00000004991	-	91	83.133	Gasterosteus_aculeatus
ENSKMAG00000022093	-	100	71.284	ENSHBUG00000015412	-	100	69.595	Haplochromis_burtoni
ENSKMAG00000022093	-	100	91.781	ENSHBUG00000010040	-	100	91.096	Haplochromis_burtoni
ENSKMAG00000022093	-	100	70.608	ENSIPUG00000000507	ralyl	100	70.608	Ictalurus_punctatus
ENSKMAG00000022093	-	100	70.370	ENSLBEG00000011011	-	100	69.595	Labrus_bergylta
ENSKMAG00000022093	-	100	89.384	ENSLBEG00000012873	-	100	89.041	Labrus_bergylta
ENSKMAG00000022093	-	100	68.919	ENSLOCG00000012787	ralyl	99	67.905	Lepisosteus_oculatus
ENSKMAG00000022093	-	99	84.483	ENSMAMG00000001723	-	97	84.483	Mastacembelus_armatus
ENSKMAG00000022093	-	98	69.153	ENSMZEG00005018748	-	99	68.136	Maylandia_zebra
ENSKMAG00000022093	-	100	91.438	ENSMZEG00005024447	-	100	90.753	Maylandia_zebra
ENSKMAG00000022093	-	97	80.743	ENSMMOG00000020441	-	86	82.095	Mola_mola
ENSKMAG00000022093	-	100	70.608	ENSMALG00000012952	-	100	68.919	Monopterus_albus
ENSKMAG00000022093	-	100	89.041	ENSMALG00000019019	-	78	89.041	Monopterus_albus
ENSKMAG00000022093	-	97	81.787	ENSNBRG00000011206	-	97	81.100	Neolamprologus_brichardi
ENSKMAG00000022093	-	98	69.831	ENSNBRG00000011376	-	99	68.136	Neolamprologus_brichardi
ENSKMAG00000022093	-	100	72.297	ENSORLG00000012719	-	100	70.608	Oryzias_latipes
ENSKMAG00000022093	-	100	85.959	ENSORLG00000017934	-	100	84.932	Oryzias_latipes
ENSKMAG00000022093	-	100	84.932	ENSORLG00020000082	-	100	83.904	Oryzias_latipes_hni
ENSKMAG00000022093	-	100	72.297	ENSORLG00020004438	-	100	70.608	Oryzias_latipes_hni
ENSKMAG00000022093	-	100	72.635	ENSORLG00015004727	-	100	70.946	Oryzias_latipes_hsok
ENSKMAG00000022093	-	100	85.616	ENSORLG00015004280	-	100	84.589	Oryzias_latipes_hsok
ENSKMAG00000022093	-	100	72.297	ENSOMEG00000001170	-	100	70.608	Oryzias_melastigma
ENSKMAG00000022093	-	100	86.301	ENSOMEG00000011821	-	100	85.959	Oryzias_melastigma
ENSKMAG00000022093	-	100	72.014	ENSPKIG00000015926	-	100	72.014	Paramormyrops_kingsleyae
ENSKMAG00000022093	-	99	76.014	ENSPMGG00000009532	-	99	74.324	Periophthalmus_magnuspinnatus
ENSKMAG00000022093	-	80	68.670	ENSPMGG00000014481	-	95	70.259	Periophthalmus_magnuspinnatus
ENSKMAG00000022093	-	97	87.755	ENSPFOG00000006120	-	99	87.075	Poecilia_formosa
ENSKMAG00000022093	-	97	83.099	ENSPLAG00000009877	-	76	81.818	Poecilia_latipinna
ENSKMAG00000022093	-	97	71.379	ENSPLAG00000011323	ralyl	100	69.655	Poecilia_latipinna
ENSKMAG00000022093	-	97	83.099	ENSPMEG00000013624	-	79	82.394	Poecilia_mexicana
ENSKMAG00000022093	-	97	71.379	ENSPMEG00000023847	ralyl	100	69.655	Poecilia_mexicana
ENSKMAG00000022093	-	97	91.519	ENSPREG00000013805	-	100	84.936	Poecilia_reticulata
ENSKMAG00000022093	-	97	70.345	ENSPREG00000001956	ralyl	100	70.000	Poecilia_reticulata
ENSKMAG00000022093	-	98	69.153	ENSPNYG00000003548	-	99	68.136	Pundamilia_nyererei
ENSKMAG00000022093	-	97	81.787	ENSPNYG00000008772	-	97	81.100	Pundamilia_nyererei
ENSKMAG00000022093	-	100	67.577	ENSPNAG00000026098	-	100	66.438	Pygocentrus_nattereri
ENSKMAG00000022093	-	100	70.946	ENSPNAG00000000498	-	88	69.257	Pygocentrus_nattereri
ENSKMAG00000022093	-	100	72.973	ENSSFOG00015009401	-	100	71.959	Scleropages_formosus
ENSKMAG00000022093	-	100	57.627	ENSSFOG00015004575	-	96	62.587	Scleropages_formosus
ENSKMAG00000022093	-	97	85.263	ENSSMAG00000015907	-	93	84.561	Scophthalmus_maximus
ENSKMAG00000022093	-	100	70.946	ENSSMAG00000005608	-	100	68.919	Scophthalmus_maximus
ENSKMAG00000022093	-	100	71.959	ENSSDUG00000007587	-	100	70.270	Seriola_dumerili
ENSKMAG00000022093	-	100	92.123	ENSSDUG00000012473	-	100	91.438	Seriola_dumerili
ENSKMAG00000022093	-	100	70.608	ENSSLDG00000020603	-	100	69.595	Seriola_lalandi_dorsalis
ENSKMAG00000022093	-	100	91.781	ENSSLDG00000011534	-	100	91.096	Seriola_lalandi_dorsalis
ENSKMAG00000022093	-	97	76.678	ENSSPAG00000013858	-	96	73.973	Stegastes_partitus
ENSKMAG00000022093	-	87	88.000	ENSTRUG00000003829	-	95	82.686	Takifugu_rubripes
ENSKMAG00000022093	-	97	79.932	ENSTNIG00000005594	-	99	79.252	Tetraodon_nigroviridis
ENSKMAG00000022093	-	100	64.094	ENSXETG00000017729	ralyl	99	64.094	Xenopus_tropicalis
ENSKMAG00000022093	-	97	69.463	ENSXCOG00000015156	-	93	67.785	Xiphophorus_couchianus
ENSKMAG00000022093	-	100	91.438	ENSXMAG00000007614	-	100	90.753	Xiphophorus_maculatus
ENSKMAG00000022093	-	100	72.635	ENSXMAG00000008396	-	100	70.946	Xiphophorus_maculatus