EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000000021 (Gene tree)
Gene ID: 102350335
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 11869 bases
Position: chrJH129861.1:21-11889
Accession: 102350335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000027	RRM_1	PF00076.22	7.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000028	-	3923	XM_006012482	ENSLACP00000000027	191 (aa)	XP_006012544	H2ZRK6

Gene Model

Click here to download ENSLACG00000000021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000021's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000021	-	95	57.838	ENSACIG00000003768	-	51	58.378	Amphilophus_citrinellus
ENSLACG00000000021	-	95	59.563	ENSAOCG00000010786	-	50	59.043	Amphiprion_ocellaris
ENSLACG00000000021	-	95	65.405	ENSACAG00000016093	RBFOX3	51	67.204	Anolis_carolinensis
ENSLACG00000000021	-	95	59.140	ENSACLG00000025552	-	50	59.140	Astatotilapia_calliptera
ENSLACG00000000021	-	86	60.479	ENSCAPG00000010217	RBFOX3	88	65.132	Cavia_aperea
ENSLACG00000000021	-	95	65.761	ENSCPBG00000010904	RBFOX3	55	65.761	Chrysemys_picta_bellii
ENSLACG00000000021	-	95	58.378	ENSCSEG00000015567	RBFOX3	51	57.754	Cynoglossus_semilaevis
ENSLACG00000000021	-	80	65.409	ENSDARG00000010083	rbfox3a	50	62.195	Danio_rerio
ENSLACG00000000021	-	95	61.957	ENSDARG00000074310	rbfox3b	67	70.423	Danio_rerio
ENSLACG00000000021	-	95	60.656	ENSEBUG00000002129	RBFOX3	53	60.656	Eptatretus_burgeri
ENSLACG00000000021	-	95	62.162	ENSELUG00000017963	rbfox3b	57	60.326	Esox_lucius
ENSLACG00000000021	-	95	63.784	ENSFCAG00000002555	RBFOX3	51	63.441	Felis_catus
ENSLACG00000000021	-	95	66.486	ENSGALG00000032889	RBFOX3	51	66.486	Gallus_gallus
ENSLACG00000000021	-	95	65.946	ENSGAGG00000020025	RBFOX3	53	65.761	Gopherus_agassizii
ENSLACG00000000021	-	95	59.140	ENSHBUG00000023098	-	63	59.140	Haplochromis_burtoni
ENSLACG00000000021	-	86	60.355	ENSHGLG00100014739	RBFOX3	50	64.935	Heterocephalus_glaber_male
ENSLACG00000000021	-	95	60.870	ENSIPUG00000021966	rbfox3b	53	67.808	Ictalurus_punctatus
ENSLACG00000000021	-	86	59.763	ENSSTOG00000026817	RBFOX3	51	63.636	Ictidomys_tridecemlineatus
ENSLACG00000000021	-	95	62.500	ENSKMAG00000006726	rbfox3b	51	60.753	Kryptolebias_marmoratus
ENSLACG00000000021	-	95	58.152	ENSLBEG00000022508	-	51	58.065	Labrus_bergylta
ENSLACG00000000021	-	95	63.978	ENSLOCG00000012267	rbfox3a	55	63.784	Lepisosteus_oculatus
ENSLACG00000000021	-	86	60.355	ENSMMUG00000023028	RBFOX3	54	64.286	Macaca_mulatta
ENSLACG00000000021	-	95	58.696	ENSMAMG00000020600	-	53	58.602	Mastacembelus_armatus
ENSLACG00000000021	-	95	64.865	ENSMGAG00000005600	RBFOX3	69	64.324	Meleagris_gallopavo
ENSLACG00000000021	-	95	65.946	ENSMODG00000002089	RBFOX3	51	65.946	Monodelphis_domestica
ENSLACG00000000021	-	95	62.500	ENSMALG00000020407	rbfox3b	50	60.326	Monopterus_albus
ENSLACG00000000021	-	95	58.696	ENSMALG00000018270	-	50	59.239	Monopterus_albus
ENSLACG00000000021	-	86	59.763	MGP_CAROLIEiJ_G0017487	Rbfox3	88	64.706	Mus_caroli
ENSLACG00000000021	-	86	59.763	ENSMUSG00000025576	Rbfox3	88	63.399	Mus_musculus
ENSLACG00000000021	-	86	59.763	MGP_PahariEiJ_G0018614	Rbfox3	88	64.706	Mus_pahari
ENSLACG00000000021	-	86	59.763	MGP_SPRETEiJ_G0018331	Rbfox3	88	64.706	Mus_spretus
ENSLACG00000000021	-	70	54.412	ENSMLUG00000008895	-	85	58.678	Myotis_lucifugus
ENSLACG00000000021	-	95	59.783	ENSNBRG00000022885	-	53	58.696	Neolamprologus_brichardi
ENSLACG00000000021	-	95	62.567	ENSNBRG00000010102	rbfox3b	54	60.753	Neolamprologus_brichardi
ENSLACG00000000021	-	89	58.659	ENSNLEG00000000153	-	56	63.636	Nomascus_leucogenys
ENSLACG00000000021	-	95	61.290	ENSOPRG00000016279	-	52	61.290	Ochotona_princeps
ENSLACG00000000021	-	95	58.602	ENSONIG00000007282	-	50	58.602	Oreochromis_niloticus
ENSLACG00000000021	-	95	64.865	ENSORLG00020018030	rbfox3b	50	62.703	Oryzias_latipes_hni
ENSLACG00000000021	-	95	64.865	ENSORLG00015009200	rbfox3b	50	62.703	Oryzias_latipes_hsok
ENSLACG00000000021	-	95	59.901	ENSOMEG00000014677	rbfox3b	53	57.921	Oryzias_melastigma
ENSLACG00000000021	-	86	60.355	ENSPPAG00000025383	RBFOX3	52	64.286	Pan_paniscus
ENSLACG00000000021	-	95	64.516	ENSPKIG00000010299	rbfox3a	53	64.324	Paramormyrops_kingsleyae
ENSLACG00000000021	-	95	63.441	ENSPMGG00000008000	rbfox3b	57	62.162	Periophthalmus_magnuspinnatus
ENSLACG00000000021	-	95	65.946	ENSPCIG00000005766	RBFOX3	50	60.784	Phascolarctos_cinereus
ENSLACG00000000021	-	95	61.290	ENSPREG00000012886	rbfox3b	53	61.290	Poecilia_reticulata
ENSLACG00000000021	-	95	62.366	ENSPPYG00000008704	RBFOX3	57	62.366	Pongo_abelii
ENSLACG00000000021	-	95	59.239	ENSPNYG00000009079	-	50	59.239	Pundamilia_nyererei
ENSLACG00000000021	-	95	62.567	ENSPNYG00000010414	rbfox3b	54	60.753	Pundamilia_nyererei
ENSLACG00000000021	-	95	61.828	ENSRBIG00000040449	RBFOX3	51	61.828	Rhinopithecus_bieti
ENSLACG00000000021	-	95	62.703	ENSSFOG00015023260	rbfox3a	50	62.703	Scleropages_formosus
ENSLACG00000000021	-	95	58.378	ENSSDUG00000015801	-	52	58.065	Seriola_dumerili
ENSLACG00000000021	-	95	58.602	ENSSLDG00000016098	-	51	58.919	Seriola_lalandi_dorsalis
ENSLACG00000000021	-	95	61.257	ENSTRUG00000004894	rbfox3b	53	59.474	Takifugu_rubripes
ENSLACG00000000021	-	95	61.957	ENSXMAG00000012939	rbfox3b	51	49.704	Xiphophorus_maculatus