EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000000029 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1257 bases
Position: chrJH136527.1:21-1277
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000035	RVT_1	PF00078.27	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000036	-	1257	-	ENSLACP00000000035	360 (aa)	-	H2ZRL4

Gene Model

Click here to download ENSLACG00000000029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000000029	-	52	31.795	ENSLACG00000003900	-	60	31.795
ENSLACG00000000029	-	54	39.109	ENSLACG00000000714	-	99	39.286
ENSLACG00000000029	-	61	31.760	ENSLACG00000005365	-	53	31.760
ENSLACG00000000029	-	50	44.134	ENSLACG00000000981	-	81	44.134
ENSLACG00000000029	-	62	60.811	ENSLACG00000004732	-	61	60.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000029	-	62	30.973	ENSAPOG00000008925	-	63	30.973	Acanthochromis_polyacanthus
ENSLACG00000000029	-	64	33.191	ENSAPEG00000005752	-	55	33.191	Amphiprion_percula
ENSLACG00000000029	-	63	32.400	ENSACLG00000006798	-	79	32.400	Astatotilapia_calliptera
ENSLACG00000000029	-	67	31.579	ENSACLG00000021935	-	75	31.579	Astatotilapia_calliptera
ENSLACG00000000029	-	57	32.850	ENSACLG00000013289	-	61	32.850	Astatotilapia_calliptera
ENSLACG00000000029	-	61	33.937	ENSACLG00000013847	-	51	33.937	Astatotilapia_calliptera
ENSLACG00000000029	-	63	31.304	ENSAMXG00000031032	-	60	31.304	Astyanax_mexicanus
ENSLACG00000000029	-	66	31.250	ENSAMXG00000029182	-	61	31.250	Astyanax_mexicanus
ENSLACG00000000029	-	62	34.934	ENSCPBG00000001687	-	76	34.934	Chrysemys_picta_bellii
ENSLACG00000000029	-	62	30.973	ENSCPBG00000001119	-	56	30.078	Chrysemys_picta_bellii
ENSLACG00000000029	-	59	33.193	ENSGAFG00000008149	-	83	33.193	Gambusia_affinis
ENSLACG00000000029	-	62	33.624	ENSGAGG00000022131	-	76	33.624	Gopherus_agassizii
ENSLACG00000000029	-	64	34.632	ENSHBUG00000009088	-	63	34.632	Haplochromis_burtoni
ENSLACG00000000029	-	63	31.008	ENSKMAG00000010799	-	72	31.008	Kryptolebias_marmoratus
ENSLACG00000000029	-	62	30.088	ENSLBEG00000003912	-	58	30.088	Labrus_bergylta
ENSLACG00000000029	-	77	31.206	ENSMAMG00000004646	-	60	31.206	Mastacembelus_armatus
ENSLACG00000000029	-	64	32.328	ENSMALG00000020245	-	85	32.328	Monopterus_albus
ENSLACG00000000029	-	64	32.328	ENSNBRG00000002477	-	69	32.328	Neolamprologus_brichardi
ENSLACG00000000029	-	63	31.140	ENSONIG00000018991	-	80	31.140	Oreochromis_niloticus
ENSLACG00000000029	-	74	31.203	ENSORLG00000022411	-	73	31.203	Oryzias_latipes
ENSLACG00000000029	-	62	32.743	ENSORLG00015021822	-	61	33.047	Oryzias_latipes_hsok
ENSLACG00000000029	-	74	35.185	ENSOMEG00000007764	-	89	35.185	Oryzias_melastigma
ENSLACG00000000029	-	64	31.780	ENSPKIG00000007140	-	53	31.780	Paramormyrops_kingsleyae
ENSLACG00000000029	-	88	31.034	ENSPKIG00000003982	-	67	31.034	Paramormyrops_kingsleyae
ENSLACG00000000029	-	67	31.579	ENSPKIG00000004057	-	60	31.579	Paramormyrops_kingsleyae
ENSLACG00000000029	-	73	33.209	ENSPSIG00000000193	-	53	33.209	Pelodiscus_sinensis
ENSLACG00000000029	-	76	32.384	ENSPSIG00000001205	-	59	32.384	Pelodiscus_sinensis
ENSLACG00000000029	-	61	32.599	ENSPSIG00000001816	-	84	32.599	Pelodiscus_sinensis
ENSLACG00000000029	-	72	31.203	ENSPSIG00000001757	-	64	31.203	Pelodiscus_sinensis
ENSLACG00000000029	-	58	31.336	ENSPSIG00000000367	-	50	31.336	Pelodiscus_sinensis
ENSLACG00000000029	-	76	31.071	ENSPSIG00000001197	-	69	31.071	Pelodiscus_sinensis
ENSLACG00000000029	-	70	33.206	ENSPSIG00000001249	-	72	33.206	Pelodiscus_sinensis
ENSLACG00000000029	-	68	33.068	ENSPSIG00000014032	-	72	33.068	Pelodiscus_sinensis
ENSLACG00000000029	-	92	31.250	ENSPSIG00000001136	-	69	31.250	Pelodiscus_sinensis
ENSLACG00000000029	-	61	33.778	ENSPSIG00000001800	-	50	33.778	Pelodiscus_sinensis
ENSLACG00000000029	-	74	30.072	ENSPMEG00000019465	-	62	30.072	Poecilia_mexicana
ENSLACG00000000029	-	63	34.649	ENSPNAG00000015949	-	60	34.649	Pygocentrus_nattereri
ENSLACG00000000029	-	77	30.175	ENSSFOG00015015399	-	81	30.175	Scleropages_formosus
ENSLACG00000000029	-	66	31.535	ENSTRUG00000024970	-	78	31.535	Takifugu_rubripes
ENSLACG00000000029	-	77	31.707	ENSXMAG00000023507	-	55	31.707	Xiphophorus_maculatus
ENSLACG00000000029	-	67	33.083	ENSXMAG00000027711	-	79	33.083	Xiphophorus_maculatus