EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000000239 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 483 bases
Position: chrAFYH01280969.1:863-1345
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000266	PARP	PF00644.20	5.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000268	-	483	-	ENSLACP00000000266	160 (aa)	-	H2ZS95

Gene Model

Click here to download ENSLACG00000000239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000000239	-	91	81.944	ENSLACG00000015833	-	92	81.944
ENSLACG00000000239	-	81	64.394	ENSLACG00000015882	gig2p	62	64.394
ENSLACG00000000239	-	85	51.471	ENSLACG00000018888	-	58	52.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000239	-	83	58.955	ENSAPOG00000002358	gig2p	74	58.955	Acanthochromis_polyacanthus
ENSLACG00000000239	-	78	66.400	ENSAPOG00000010190	gig2h	81	66.400	Acanthochromis_polyacanthus
ENSLACG00000000239	-	75	67.500	ENSACIG00000009062	-	84	67.500	Amphilophus_citrinellus
ENSLACG00000000239	-	74	61.667	ENSACIG00000006917	-	74	61.667	Amphilophus_citrinellus
ENSLACG00000000239	-	78	65.625	ENSACIG00000018452	-	77	67.500	Amphilophus_citrinellus
ENSLACG00000000239	-	83	59.701	ENSACIG00000006934	gig2p	64	59.701	Amphilophus_citrinellus
ENSLACG00000000239	-	93	60.403	ENSACIG00000023385	-	89	61.806	Amphilophus_citrinellus
ENSLACG00000000239	-	91	67.742	ENSAOCG00000010944	-	76	67.742	Amphiprion_ocellaris
ENSLACG00000000239	-	83	58.955	ENSAOCG00000003416	gig2p	59	58.955	Amphiprion_ocellaris
ENSLACG00000000239	-	83	58.955	ENSAPEG00000017256	gig2p	59	58.955	Amphiprion_percula
ENSLACG00000000239	-	80	61.538	ENSATEG00000003229	gig2p	64	61.538	Anabas_testudineus
ENSLACG00000000239	-	81	59.091	ENSATEG00000003163	gig2p	85	59.091	Anabas_testudineus
ENSLACG00000000239	-	87	51.079	ENSATEG00000003204	gig2p	85	51.079	Anabas_testudineus
ENSLACG00000000239	-	85	57.971	ENSATEG00000003250	gig2p	65	57.971	Anabas_testudineus
ENSLACG00000000239	-	88	54.930	ENSACLG00000006461	-	64	54.930	Astatotilapia_calliptera
ENSLACG00000000239	-	76	63.200	ENSACLG00000019044	gig2g	87	63.200	Astatotilapia_calliptera
ENSLACG00000000239	-	90	69.697	ENSAMXG00000004144	-	93	69.697	Astyanax_mexicanus
ENSLACG00000000239	-	93	67.114	ENSAMXG00000026110	gig2d	98	67.114	Astyanax_mexicanus
ENSLACG00000000239	-	85	52.206	ENSAMXG00000026111	-	59	52.713	Astyanax_mexicanus
ENSLACG00000000239	-	83	54.478	ENSAMXG00000025547	gig2o	61	55.118	Astyanax_mexicanus
ENSLACG00000000239	-	79	57.812	ENSAMXG00000016000	-	75	61.017	Astyanax_mexicanus
ENSLACG00000000239	-	81	63.077	ENSAMXG00000041087	-	86	63.077	Astyanax_mexicanus
ENSLACG00000000239	-	81	61.240	ENSAMXG00000026038	-	88	62.205	Astyanax_mexicanus
ENSLACG00000000239	-	84	59.559	ENSAMXG00000043196	-	96	59.559	Astyanax_mexicanus
ENSLACG00000000239	-	94	66.447	ENSAMXG00000032512	gig2d	93	67.808	Astyanax_mexicanus
ENSLACG00000000239	-	83	58.955	ENSAMXG00000025187	gig2p	61	58.955	Astyanax_mexicanus
ENSLACG00000000239	-	84	60.000	ENSAMXG00000030672	-	92	60.000	Astyanax_mexicanus
ENSLACG00000000239	-	81	56.154	ENSCVAG00000003718	-	82	57.600	Cyprinodon_variegatus
ENSLACG00000000239	-	89	55.556	ENSCVAG00000006837	gig2p	69	55.556	Cyprinodon_variegatus
ENSLACG00000000239	-	73	60.684	ENSCVAG00000003734	-	86	60.169	Cyprinodon_variegatus
ENSLACG00000000239	-	79	62.500	ENSCVAG00000006821	gig2p	76	62.500	Cyprinodon_variegatus
ENSLACG00000000239	-	90	59.722	ENSDARG00000098772	gig2d	93	59.722	Danio_rerio
ENSLACG00000000239	-	98	62.069	ENSDARG00000075757	gig2e	95	62.329	Danio_rerio
ENSLACG00000000239	-	91	63.448	ENSDARG00000098463	gig2g	91	64.789	Danio_rerio
ENSLACG00000000239	-	83	62.121	ENSDARG00000099735	gig2f	83	62.121	Danio_rerio
ENSLACG00000000239	-	83	61.194	ENSDARG00000088260	gig2p	61	61.194	Danio_rerio
ENSLACG00000000239	-	90	61.806	ENSDARG00000069769	gig2j	93	61.806	Danio_rerio
ENSLACG00000000239	-	91	62.759	ENSDARG00000103444	gig2h	91	64.085	Danio_rerio
ENSLACG00000000239	-	96	62.338	ENSDARG00000099325	gig2i	91	65.278	Danio_rerio
ENSLACG00000000239	-	86	52.857	ENSDARG00000086903	gig2o	60	54.198	Danio_rerio
ENSLACG00000000239	-	98	62.658	ENSDARG00000091730	gig2l	100	66.667	Danio_rerio
ENSLACG00000000239	-	81	57.252	ENSELUG00000017166	gig2o	61	57.252	Esox_lucius
ENSLACG00000000239	-	83	59.701	ENSFHEG00000017724	gig2p	63	57.241	Fundulus_heteroclitus
ENSLACG00000000239	-	89	53.472	ENSFHEG00000017712	-	59	53.472	Fundulus_heteroclitus
ENSLACG00000000239	-	82	61.654	ENSGAFG00000009453	gig2p	90	59.028	Gambusia_affinis
ENSLACG00000000239	-	87	54.610	ENSGAFG00000009440	gig2p	86	55.556	Gambusia_affinis
ENSLACG00000000239	-	55	61.364	ENSGACG00000010431	gig2p	100	61.364	Gasterosteus_aculeatus
ENSLACG00000000239	-	78	66.129	ENSHBUG00000018939	-	83	66.129	Haplochromis_burtoni
ENSLACG00000000239	-	89	55.556	ENSHBUG00000010473	-	82	55.556	Haplochromis_burtoni
ENSLACG00000000239	-	75	63.333	ENSHBUG00000019410	-	84	63.333	Haplochromis_burtoni
ENSLACG00000000239	-	79	59.375	ENSHBUG00000010491	gig2p	57	59.375	Haplochromis_burtoni
ENSLACG00000000239	-	81	57.252	ENSIPUG00000009280	gig2o	54	57.252	Ictalurus_punctatus
ENSLACG00000000239	-	81	59.848	ENSIPUG00000005433	-	72	64.957	Ictalurus_punctatus
ENSLACG00000000239	-	76	61.983	ENSIPUG00000007035	-	72	61.983	Ictalurus_punctatus
ENSLACG00000000239	-	90	69.630	ENSIPUG00000001510	-	94	69.630	Ictalurus_punctatus
ENSLACG00000000239	-	76	61.983	ENSIPUG00000007003	-	90	61.983	Ictalurus_punctatus
ENSLACG00000000239	-	79	63.780	ENSIPUG00000000101	-	76	67.826	Ictalurus_punctatus
ENSLACG00000000239	-	85	51.471	ENSIPUG00000001531	-	59	51.938	Ictalurus_punctatus
ENSLACG00000000239	-	81	60.305	ENSIPUG00000022554	gig2p	60	60.305	Ictalurus_punctatus
ENSLACG00000000239	-	89	54.167	ENSKMAG00000007923	-	63	54.167	Kryptolebias_marmoratus
ENSLACG00000000239	-	83	59.701	ENSKMAG00000007907	gig2p	63	57.241	Kryptolebias_marmoratus
ENSLACG00000000239	-	83	58.209	ENSLBEG00000018778	gig2p	63	58.209	Labrus_bergylta
ENSLACG00000000239	-	89	57.639	ENSLBEG00000018765	-	65	57.639	Labrus_bergylta
ENSLACG00000000239	-	85	52.206	ENSLOCG00000005879	-	62	52.713	Lepisosteus_oculatus
ENSLACG00000000239	-	90	69.231	ENSLOCG00000005897	gig2e	62	69.231	Lepisosteus_oculatus
ENSLACG00000000239	-	89	54.861	ENSMAMG00000011285	gig2p	64	54.861	Mastacembelus_armatus
ENSLACG00000000239	-	89	54.861	ENSMZEG00005013815	-	62	54.861	Maylandia_zebra
ENSLACG00000000239	-	90	55.479	ENSMMOG00000005594	gig2p	63	55.479	Mola_mola
ENSLACG00000000239	-	86	57.143	ENSMMOG00000005597	-	63	57.143	Mola_mola
ENSLACG00000000239	-	83	58.955	ENSMALG00000008417	gig2p	59	58.955	Monopterus_albus
ENSLACG00000000239	-	82	58.647	ENSNBRG00000009049	-	83	58.647	Neolamprologus_brichardi
ENSLACG00000000239	-	89	55.556	ENSNBRG00000000872	-	81	55.556	Neolamprologus_brichardi
ENSLACG00000000239	-	89	61.379	ENSNBRG00000009062	-	88	61.379	Neolamprologus_brichardi
ENSLACG00000000239	-	81	60.305	ENSNBRG00000000843	gig2p	66	60.305	Neolamprologus_brichardi
ENSLACG00000000239	-	89	61.719	ENSONIG00000011824	gig2p	85	61.719	Oreochromis_niloticus
ENSLACG00000000239	-	98	65.873	ENSONIG00000009460	gig2h	95	65.873	Oreochromis_niloticus
ENSLACG00000000239	-	83	58.955	ENSORLG00000010287	gig2p	65	56.552	Oryzias_latipes
ENSLACG00000000239	-	86	52.518	ENSORLG00000028073	-	67	52.518	Oryzias_latipes
ENSLACG00000000239	-	84	53.237	ENSORLG00020008444	-	74	53.237	Oryzias_latipes_hni
ENSLACG00000000239	-	88	57.042	ENSORLG00020008422	gig2p	88	57.042	Oryzias_latipes_hni
ENSLACG00000000239	-	81	58.015	ENSORLG00015022600	gig2p	95	58.015	Oryzias_latipes_hsok
ENSLACG00000000239	-	95	54.962	ENSORLG00015008571	gig2g	92	56.790	Oryzias_latipes_hsok
ENSLACG00000000239	-	86	51.799	ENSORLG00015022642	-	67	51.799	Oryzias_latipes_hsok
ENSLACG00000000239	-	77	58.537	ENSOMEG00000015253	-	82	58.537	Oryzias_melastigma
ENSLACG00000000239	-	81	55.814	ENSOMEG00000013250	-	75	55.814	Oryzias_melastigma
ENSLACG00000000239	-	79	60.630	ENSOMEG00000013589	-	84	57.241	Oryzias_melastigma
ENSLACG00000000239	-	81	52.273	ENSOMEG00000007340	-	75	52.273	Oryzias_melastigma
ENSLACG00000000239	-	89	54.225	ENSOMEG00000015239	-	89	54.225	Oryzias_melastigma
ENSLACG00000000239	-	81	67.669	ENSPKIG00000014377	-	99	67.669	Paramormyrops_kingsleyae
ENSLACG00000000239	-	77	66.935	ENSPKIG00000000863	-	75	66.935	Paramormyrops_kingsleyae
ENSLACG00000000239	-	79	66.142	ENSPKIG00000014390	-	94	66.142	Paramormyrops_kingsleyae
ENSLACG00000000239	-	76	69.919	ENSPKIG00000001665	-	83	69.919	Paramormyrops_kingsleyae
ENSLACG00000000239	-	74	68.333	ENSPKIG00000000878	-	91	68.333	Paramormyrops_kingsleyae
ENSLACG00000000239	-	91	60.265	ENSPKIG00000003192	-	92	60.265	Paramormyrops_kingsleyae
ENSLACG00000000239	-	76	67.480	ENSPKIG00000000927	-	69	67.480	Paramormyrops_kingsleyae
ENSLACG00000000239	-	84	61.481	ENSPMAG00000010332	-	86	61.481	Petromyzon_marinus
ENSLACG00000000239	-	83	65.041	ENSPMAG00000005660	-	90	65.041	Petromyzon_marinus
ENSLACG00000000239	-	94	60.000	ENSPFOG00000006191	gig2p	89	59.310	Poecilia_formosa
ENSLACG00000000239	-	81	67.742	ENSPFOG00000005274	gig2g	93	67.742	Poecilia_formosa
ENSLACG00000000239	-	78	63.200	ENSPMEG00000007652	gig2h	78	63.200	Poecilia_mexicana
ENSLACG00000000239	-	89	54.167	ENSPMEG00000018196	-	64	54.167	Poecilia_mexicana
ENSLACG00000000239	-	86	59.286	ENSPMEG00000018167	gig2p	64	58.621	Poecilia_mexicana
ENSLACG00000000239	-	79	61.832	ENSPREG00000005283	gig2p	81	61.832	Poecilia_reticulata
ENSLACG00000000239	-	85	55.072	ENSPREG00000005273	-	62	55.072	Poecilia_reticulata
ENSLACG00000000239	-	89	62.759	ENSPNYG00000009627	-	80	62.759	Pundamilia_nyererei
ENSLACG00000000239	-	86	55.396	ENSPNYG00000021214	-	78	55.396	Pundamilia_nyererei
ENSLACG00000000239	-	79	59.375	ENSPNYG00000021226	gig2p	57	59.375	Pundamilia_nyererei
ENSLACG00000000239	-	86	63.866	ENSPNYG00000009654	-	93	66.935	Pundamilia_nyererei
ENSLACG00000000239	-	76	65.574	ENSPNAG00000026625	-	86	65.574	Pygocentrus_nattereri
ENSLACG00000000239	-	75	61.157	ENSPNAG00000026634	-	91	61.157	Pygocentrus_nattereri
ENSLACG00000000239	-	83	64.925	ENSPNAG00000014831	gig2p	61	64.925	Pygocentrus_nattereri
ENSLACG00000000239	-	81	58.015	ENSPNAG00000021255	-	83	58.015	Pygocentrus_nattereri
ENSLACG00000000239	-	81	54.198	ENSPNAG00000012118	gig2o	63	54.198	Pygocentrus_nattereri
ENSLACG00000000239	-	90	65.972	ENSPNAG00000015845	gig2d	93	65.972	Pygocentrus_nattereri
ENSLACG00000000239	-	85	53.676	ENSPNAG00000015816	-	53	58.120	Pygocentrus_nattereri
ENSLACG00000000239	-	88	66.429	ENSPNAG00000015811	gig2d	92	66.429	Pygocentrus_nattereri
ENSLACG00000000239	-	80	64.615	ENSSFOG00015009887	gig2p	59	64.615	Scleropages_formosus
ENSLACG00000000239	-	91	64.138	ENSSFOG00015005869	-	67	64.138	Scleropages_formosus
ENSLACG00000000239	-	88	51.064	ENSSFOG00015005862	-	59	53.488	Scleropages_formosus
ENSLACG00000000239	-	81	54.198	ENSSFOG00015007829	gig2o	60	54.198	Scleropages_formosus
ENSLACG00000000239	-	90	63.889	ENSSFOG00015005876	-	91	63.889	Scleropages_formosus
ENSLACG00000000239	-	93	69.600	ENSSFOG00015005900	-	94	69.355	Scleropages_formosus
ENSLACG00000000239	-	89	51.389	ENSSMAG00000008329	-	63	51.389	Scophthalmus_maximus
ENSLACG00000000239	-	83	58.955	ENSSMAG00000008317	gig2p	60	58.955	Scophthalmus_maximus
ENSLACG00000000239	-	79	60.938	ENSSDUG00000018079	-	76	60.938	Seriola_dumerili
ENSLACG00000000239	-	83	57.463	ENSSDUG00000018069	gig2p	63	57.463	Seriola_dumerili
ENSLACG00000000239	-	89	54.167	ENSSLDG00000018358	gig2p	64	54.167	Seriola_lalandi_dorsalis
ENSLACG00000000239	-	81	57.576	ENSSPAG00000005252	gig2p	72	55.245	Stegastes_partitus
ENSLACG00000000239	-	83	60.448	ENSTRUG00000023008	gig2p	62	60.448	Takifugu_rubripes
ENSLACG00000000239	-	93	70.543	ENSXETG00000032410	-	88	70.543	Xenopus_tropicalis
ENSLACG00000000239	-	89	52.778	ENSXMAG00000019444	-	64	52.778	Xiphophorus_maculatus