EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000000270 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA2
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 75185 bases
Position: chrJH127237.1:1041-76225
Accession: 11098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000301	BRK	PF07533.16	6.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000303	SMARCA2-201	2575	-	ENSLACP00000000301	835 (aa)	-	H2ZSD0

Gene Model

Click here to download ENSLACG00000000270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000000270	SMARCA2	80	62.572	ENSLACG00000015309	SMARCA4	86	61.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000270	SMARCA2	57	87.002	ENSG00000080503	SMARCA2	100	82.870	Homo_sapiens
ENSLACG00000000270	SMARCA2	99	69.359	ENSAPOG00000002641	SMARCA2	52	63.899	Acanthochromis_polyacanthus
ENSLACG00000000270	SMARCA2	99	73.877	ENSAMEG00000012325	SMARCA2	53	72.354	Ailuropoda_melanoleuca
ENSLACG00000000270	SMARCA2	99	67.874	ENSAPEG00000007646	SMARCA2	51	63.534	Amphiprion_percula
ENSLACG00000000270	SMARCA2	87	84.073	ENSAPLG00000013873	SMARCA2	51	73.058	Anas_platyrhynchos
ENSLACG00000000270	SMARCA2	57	87.002	ENSANAG00000026498	SMARCA2	54	72.084	Aotus_nancymaae
ENSLACG00000000270	SMARCA2	99	73.697	ENSCJAG00000010710	SMARCA2	54	71.941	Callithrix_jacchus
ENSLACG00000000270	SMARCA2	57	87.002	ENSCCAG00000030636	SMARCA2	54	72.119	Cebus_capucinus
ENSLACG00000000270	SMARCA2	83	87.002	ENSCATG00000031470	SMARCA2	50	72.512	Cercocebus_atys
ENSLACG00000000270	SMARCA2	57	87.002	ENSCSAG00000008650	SMARCA2	52	72.478	Chlorocebus_sabaeus
ENSLACG00000000270	SMARCA2	57	87.002	ENSCANG00000039597	SMARCA2	53	72.603	Colobus_angolensis_palliatus
ENSLACG00000000270	SMARCA2	85	75.813	ENSCVAG00000016571	SMARCA2	55	62.753	Cyprinodon_variegatus
ENSLACG00000000270	SMARCA2	94	67.402	ENSELUG00000010318	smarca2	51	68.222	Esox_lucius
ENSLACG00000000270	SMARCA2	99	68.595	ENSGACG00000014488	SMARCA2	50	65.971	Gasterosteus_aculeatus
ENSLACG00000000270	SMARCA2	99	73.614	ENSHGLG00100010496	SMARCA2	50	72.289	Heterocephalus_glaber_male
ENSLACG00000000270	SMARCA2	83	82.870	ENSMMUG00000015279	SMARCA2	51	72.932	Macaca_mulatta
ENSLACG00000000270	SMARCA2	57	87.002	ENSMNEG00000041069	SMARCA2	54	72.693	Macaca_nemestrina
ENSLACG00000000270	SMARCA2	99	68.545	ENSMAMG00000003056	SMARCA2	52	64.968	Mastacembelus_armatus
ENSLACG00000000270	SMARCA2	93	83.828	ENSMGAG00000005160	-	59	82.508	Meleagris_gallopavo
ENSLACG00000000270	SMARCA2	57	87.212	ENSMICG00000005162	SMARCA2	54	73.217	Microcebus_murinus
ENSLACG00000000270	SMARCA2	88	79.775	MGP_CAROLIEiJ_G0022841	Smarca2	50	81.188	Mus_caroli
ENSLACG00000000270	SMARCA2	89	81.944	ENSMUSG00000024921	Smarca2	62	87.324	Mus_musculus
ENSLACG00000000270	SMARCA2	83	86.373	MGP_PahariEiJ_G0014334	Smarca2	51	72.180	Mus_pahari
ENSLACG00000000270	SMARCA2	89	81.481	MGP_SPRETEiJ_G0023759	Smarca2	51	71.696	Mus_spretus
ENSLACG00000000270	SMARCA2	91	62.339	ENSNBRG00000017998	SMARCA2	51	62.339	Neolamprologus_brichardi
ENSLACG00000000270	SMARCA2	99	67.929	ENSORLG00000020820	SMARCA2	52	62.708	Oryzias_latipes
ENSLACG00000000270	SMARCA2	99	67.769	ENSORLG00015006289	SMARCA2	51	62.357	Oryzias_latipes_hsok
ENSLACG00000000270	SMARCA2	99	75.240	ENSPTRG00000051168	SMARCA2	53	73.091	Pan_troglodytes
ENSLACG00000000270	SMARCA2	83	86.792	ENSPEMG00000019821	Smarca2	51	78.182	Peromyscus_maniculatus_bairdii
ENSLACG00000000270	SMARCA2	99	75.829	ENSPCIG00000015658	SMARCA2	50	75.975	Phascolarctos_cinereus
ENSLACG00000000270	SMARCA2	99	67.526	ENSPREG00000013800	SMARCA2	50	66.456	Poecilia_reticulata
ENSLACG00000000270	SMARCA2	56	88.627	ENSPCOG00000025709	SMARCA2	55	72.603	Propithecus_coquereli
ENSLACG00000000270	SMARCA2	83	86.164	ENSRNOG00000011931	Smarca2	52	71.805	Rattus_norvegicus
ENSLACG00000000270	SMARCA2	83	87.002	ENSRBIG00000038618	SMARCA2	51	81.226	Rhinopithecus_bieti
ENSLACG00000000270	SMARCA2	82	88.248	ENSRROG00000019271	SMARCA2	54	72.659	Rhinopithecus_roxellana
ENSLACG00000000270	SMARCA2	99	75.948	ENSSHAG00000007884	SMARCA2	50	76.060	Sarcophilus_harrisii
ENSLACG00000000270	SMARCA2	99	72.323	ENSSFOG00015014870	SMARCA2	52	70.544	Scleropages_formosus
ENSLACG00000000270	SMARCA2	99	71.718	ENSUAMG00000024701	SMARCA2	53	68.025	Ursus_americanus
ENSLACG00000000270	SMARCA2	99	70.492	ENSXETG00000015299	smarca2	50	68.834	Xenopus_tropicalis
ENSLACG00000000270	SMARCA2	59	74.797	ENSXCOG00000011073	SMARCA2	52	62.060	Xiphophorus_couchianus
ENSLACG00000000270	SMARCA2	99	67.290	ENSXMAG00000015611	SMARCA2	50	66.667	Xiphophorus_maculatus