EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000000300 (Gene tree)
Gene ID: 102350083
Gene Symbol: RIOK1
Alias: AD034|FLJ30006|RRP10|bA288G3.1
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 49571 bases
Position: chrJH131623.1:1164-50734
Accession: 18656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000332	RIO1	PF01163.22	1.3e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000334	RIOK1-201	6444	-	ENSLACP00000000332	566 (aa)	-	H2ZSG1

Gene Model

Click here to download ENSLACG00000000300's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000300	RIOK1	100	67.247	ENSG00000124784	RIOK1	100	66.958	Homo_sapiens
ENSLACG00000000300	RIOK1	57	67.812	ENSAPOG00000015632	riok1	99	69.062	Acanthochromis_polyacanthus
ENSLACG00000000300	RIOK1	100	66.957	ENSAMEG00000017367	RIOK1	100	66.957	Ailuropoda_melanoleuca
ENSLACG00000000300	RIOK1	87	63.838	ENSACIG00000003735	riok1	88	63.878	Amphilophus_citrinellus
ENSLACG00000000300	RIOK1	99	58.541	ENSAOCG00000011818	riok1	100	58.897	Amphiprion_ocellaris
ENSLACG00000000300	RIOK1	99	58.437	ENSAPEG00000001345	riok1	100	58.467	Amphiprion_percula
ENSLACG00000000300	RIOK1	81	63.617	ENSATEG00000006594	riok1	99	63.617	Anabas_testudineus
ENSLACG00000000300	RIOK1	83	70.975	ENSAPLG00000004196	RIOK1	100	70.975	Anas_platyrhynchos
ENSLACG00000000300	RIOK1	100	65.338	ENSACAG00000000695	RIOK1	100	64.696	Anolis_carolinensis
ENSLACG00000000300	RIOK1	100	56.870	ENSANAG00000023777	RIOK1	100	57.941	Aotus_nancymaae
ENSLACG00000000300	RIOK1	99	59.752	ENSACLG00000015799	riok1	99	59.717	Astatotilapia_calliptera
ENSLACG00000000300	RIOK1	99	62.653	ENSAMXG00000015286	riok1	99	62.153	Astyanax_mexicanus
ENSLACG00000000300	RIOK1	100	65.398	ENSBTAG00000013821	RIOK1	100	64.767	Bos_taurus
ENSLACG00000000300	RIOK1	70	45.000	WBGene00019698	riok-1	75	45.679	Caenorhabditis_elegans
ENSLACG00000000300	RIOK1	100	65.217	ENSCJAG00000042960	RIOK1	100	66.609	Callithrix_jacchus
ENSLACG00000000300	RIOK1	86	70.732	ENSCAFG00000009563	RIOK1	100	66.609	Canis_familiaris
ENSLACG00000000300	RIOK1	81	68.478	ENSCAFG00020013233	RIOK1	96	64.457	Canis_lupus_dingo
ENSLACG00000000300	RIOK1	100	65.052	ENSCHIG00000001534	RIOK1	100	65.217	Capra_hircus
ENSLACG00000000300	RIOK1	66	77.454	ENSTSYG00000011368	RIOK1	100	79.205	Carlito_syrichta
ENSLACG00000000300	RIOK1	78	70.000	ENSCAPG00000008489	RIOK1	100	70.259	Cavia_aperea
ENSLACG00000000300	RIOK1	98	65.771	ENSCPOG00000009882	RIOK1	100	66.084	Cavia_porcellus
ENSLACG00000000300	RIOK1	100	66.028	ENSCCAG00000024061	RIOK1	100	67.247	Cebus_capucinus
ENSLACG00000000300	RIOK1	100	66.841	ENSCATG00000001548	RIOK1	100	66.841	Cercocebus_atys
ENSLACG00000000300	RIOK1	100	66.202	ENSCLAG00000003522	RIOK1	100	67.073	Chinchilla_lanigera
ENSLACG00000000300	RIOK1	95	65.129	ENSCSAG00000007396	RIOK1	99	65.129	Chlorocebus_sabaeus
ENSLACG00000000300	RIOK1	57	76.101	ENSCHOG00000001873	RIOK1	62	67.935	Choloepus_hoffmanni
ENSLACG00000000300	RIOK1	94	63.925	ENSCPBG00000008685	RIOK1	91	63.993	Chrysemys_picta_bellii
ENSLACG00000000300	RIOK1	100	66.841	ENSCANG00000032919	RIOK1	100	66.841	Colobus_angolensis_palliatus
ENSLACG00000000300	RIOK1	100	64.634	ENSCGRG00001018868	Riok1	100	63.937	Cricetulus_griseus_chok1gshd
ENSLACG00000000300	RIOK1	100	64.634	ENSCGRG00000008015	Riok1	100	63.937	Cricetulus_griseus_crigri
ENSLACG00000000300	RIOK1	87	47.012	ENSCSEG00000015014	riok1	86	47.273	Cynoglossus_semilaevis
ENSLACG00000000300	RIOK1	57	64.832	ENSCVAG00000011291	riok1	99	64.832	Cyprinodon_variegatus
ENSLACG00000000300	RIOK1	98	61.947	ENSDARG00000016399	riok1	99	62.367	Danio_rerio
ENSLACG00000000300	RIOK1	100	65.803	ENSDNOG00000015813	RIOK1	86	70.445	Dasypus_novemcinctus
ENSLACG00000000300	RIOK1	100	66.261	ENSDORG00000008530	Riok1	100	66.261	Dipodomys_ordii
ENSLACG00000000300	RIOK1	79	46.336	FBgn0036187	RIOK1	79	47.314	Drosophila_melanogaster
ENSLACG00000000300	RIOK1	100	63.700	ENSETEG00000020273	RIOK1	100	63.356	Echinops_telfairi
ENSLACG00000000300	RIOK1	86	61.066	ENSEBUG00000013672	riok1	86	61.066	Eptatretus_burgeri
ENSLACG00000000300	RIOK1	94	63.869	ENSEASG00005012032	RIOK1	94	65.121	Equus_asinus_asinus
ENSLACG00000000300	RIOK1	100	65.411	ENSECAG00000009007	RIOK1	100	66.609	Equus_caballus
ENSLACG00000000300	RIOK1	77	61.591	ENSEEUG00000007123	RIOK1	100	61.591	Erinaceus_europaeus
ENSLACG00000000300	RIOK1	99	61.348	ENSELUG00000017029	riok1	99	61.744	Esox_lucius
ENSLACG00000000300	RIOK1	100	66.319	ENSFCAG00000027290	RIOK1	100	65.799	Felis_catus
ENSLACG00000000300	RIOK1	100	66.491	ENSFALG00000013244	RIOK1	100	66.958	Ficedula_albicollis
ENSLACG00000000300	RIOK1	100	65.505	ENSFDAG00000019139	RIOK1	100	65.505	Fukomys_damarensis
ENSLACG00000000300	RIOK1	68	66.495	ENSFHEG00000021419	riok1	82	76.109	Fundulus_heteroclitus
ENSLACG00000000300	RIOK1	72	62.136	ENSGMOG00000018668	riok1	95	62.315	Gadus_morhua
ENSLACG00000000300	RIOK1	57	75.692	ENSGALG00000012795	RIOK1	100	77.734	Gallus_gallus
ENSLACG00000000300	RIOK1	83	52.008	ENSGAFG00000004091	riok1	79	52.854	Gambusia_affinis
ENSLACG00000000300	RIOK1	96	56.364	ENSGACG00000002496	riok1	94	64.694	Gasterosteus_aculeatus
ENSLACG00000000300	RIOK1	82	65.116	ENSGAGG00000002262	RIOK1	98	65.598	Gopherus_agassizii
ENSLACG00000000300	RIOK1	100	56.667	ENSGGOG00000011037	RIOK1	100	55.986	Gorilla_gorilla
ENSLACG00000000300	RIOK1	100	62.478	ENSHGLG00000008699	RIOK1	100	63.158	Heterocephalus_glaber_female
ENSLACG00000000300	RIOK1	100	62.651	ENSHGLG00100008188	RIOK1	100	63.333	Heterocephalus_glaber_male
ENSLACG00000000300	RIOK1	87	61.818	ENSHCOG00000013275	riok1	91	62.245	Hippocampus_comes
ENSLACG00000000300	RIOK1	99	61.728	ENSIPUG00000003290	riok1	87	67.470	Ictalurus_punctatus
ENSLACG00000000300	RIOK1	100	65.685	ENSSTOG00000009289	RIOK1	100	66.957	Ictidomys_tridecemlineatus
ENSLACG00000000300	RIOK1	100	64.028	ENSJJAG00000015152	Riok1	100	64.747	Jaculus_jaculus
ENSLACG00000000300	RIOK1	68	64.541	ENSKMAG00000019378	riok1	99	64.541	Kryptolebias_marmoratus
ENSLACG00000000300	RIOK1	87	63.984	ENSLBEG00000016650	riok1	87	64.024	Labrus_bergylta
ENSLACG00000000300	RIOK1	100	66.373	ENSLOCG00000011728	riok1	100	66.549	Lepisosteus_oculatus
ENSLACG00000000300	RIOK1	100	67.133	ENSLAFG00000005504	RIOK1	100	66.843	Loxodonta_africana
ENSLACG00000000300	RIOK1	100	66.492	ENSMFAG00000029990	RIOK1	100	66.492	Macaca_fascicularis
ENSLACG00000000300	RIOK1	100	66.318	ENSMMUG00000015577	RIOK1	100	66.318	Macaca_mulatta
ENSLACG00000000300	RIOK1	100	63.700	ENSMNEG00000034396	RIOK1	99	66.525	Macaca_nemestrina
ENSLACG00000000300	RIOK1	100	67.016	ENSMLEG00000026327	RIOK1	100	67.016	Mandrillus_leucophaeus
ENSLACG00000000300	RIOK1	98	60.323	ENSMAMG00000019557	riok1	88	64.909	Mastacembelus_armatus
ENSLACG00000000300	RIOK1	99	60.106	ENSMZEG00005019482	riok1	99	59.894	Maylandia_zebra
ENSLACG00000000300	RIOK1	100	65.112	ENSMGAG00000003816	RIOK1	100	66.608	Meleagris_gallopavo
ENSLACG00000000300	RIOK1	100	63.937	ENSMAUG00000012751	Riok1	100	63.763	Mesocricetus_auratus
ENSLACG00000000300	RIOK1	100	66.783	ENSMICG00000044301	RIOK1	84	66.783	Microcebus_murinus
ENSLACG00000000300	RIOK1	100	63.826	ENSMOCG00000017032	Riok1	100	63.040	Microtus_ochrogaster
ENSLACG00000000300	RIOK1	83	55.489	ENSMMOG00000020598	riok1	87	55.888	Mola_mola
ENSLACG00000000300	RIOK1	100	64.444	ENSMODG00000009964	RIOK1	100	63.574	Monodelphis_domestica
ENSLACG00000000300	RIOK1	83	60.510	ENSMALG00000019982	riok1	89	60.510	Monopterus_albus
ENSLACG00000000300	RIOK1	100	65.035	MGP_CAROLIEiJ_G0018439	Riok1	100	64.000	Mus_caroli
ENSLACG00000000300	RIOK1	100	64.870	ENSMUSG00000021428	Riok1	100	64.860	Mus_musculus
ENSLACG00000000300	RIOK1	100	64.336	MGP_PahariEiJ_G0019507	Riok1	100	64.522	Mus_pahari
ENSLACG00000000300	RIOK1	100	64.685	MGP_SPRETEiJ_G0019319	Riok1	100	63.826	Mus_spretus
ENSLACG00000000300	RIOK1	100	66.783	ENSMPUG00000000570	RIOK1	100	66.783	Mustela_putorius_furo
ENSLACG00000000300	RIOK1	100	67.708	ENSMLUG00000015312	RIOK1	100	67.882	Myotis_lucifugus
ENSLACG00000000300	RIOK1	100	67.133	ENSNGAG00000021734	Riok1	100	67.133	Nannospalax_galili
ENSLACG00000000300	RIOK1	74	65.882	ENSNBRG00000017489	riok1	84	63.393	Neolamprologus_brichardi
ENSLACG00000000300	RIOK1	100	59.790	ENSNLEG00000011621	RIOK1	100	59.474	Nomascus_leucogenys
ENSLACG00000000300	RIOK1	66	54.813	ENSMEUG00000006679	-	66	54.813	Notamacropus_eugenii
ENSLACG00000000300	RIOK1	65	71.698	ENSOPRG00000009524	RIOK1	100	71.698	Ochotona_princeps
ENSLACG00000000300	RIOK1	71	50.962	ENSODEG00000005663	RIOK1	100	53.086	Octodon_degus
ENSLACG00000000300	RIOK1	99	59.683	ENSONIG00000014010	riok1	87	64.490	Oreochromis_niloticus
ENSLACG00000000300	RIOK1	81	71.121	ENSOANG00000012553	RIOK1	100	71.983	Ornithorhynchus_anatinus
ENSLACG00000000300	RIOK1	100	64.444	ENSOCUG00000011824	RIOK1	100	65.794	Oryctolagus_cuniculus
ENSLACG00000000300	RIOK1	98	60.144	ENSORLG00000008221	riok1	88	64.286	Oryzias_latipes
ENSLACG00000000300	RIOK1	98	57.838	ENSORLG00020013838	riok1	62	62.090	Oryzias_latipes_hni
ENSLACG00000000300	RIOK1	98	59.425	ENSORLG00015009817	riok1	88	64.082	Oryzias_latipes_hsok
ENSLACG00000000300	RIOK1	98	59.425	ENSOMEG00000002758	riok1	80	63.878	Oryzias_melastigma
ENSLACG00000000300	RIOK1	100	60.733	ENSOGAG00000010192	RIOK1	100	60.558	Otolemur_garnettii
ENSLACG00000000300	RIOK1	100	65.398	ENSOARG00000017747	RIOK1	100	65.913	Ovis_aries
ENSLACG00000000300	RIOK1	100	65.909	ENSPPAG00000016349	RIOK1	100	76.000	Pan_paniscus
ENSLACG00000000300	RIOK1	100	66.087	ENSPPRG00000001932	RIOK1	100	65.565	Panthera_pardus
ENSLACG00000000300	RIOK1	100	66.261	ENSPTIG00000018545	RIOK1	100	65.739	Panthera_tigris_altaica
ENSLACG00000000300	RIOK1	100	67.422	ENSPTRG00000017700	RIOK1	100	67.133	Pan_troglodytes
ENSLACG00000000300	RIOK1	100	67.190	ENSPANG00000016522	RIOK1	100	67.190	Papio_anubis
ENSLACG00000000300	RIOK1	99	61.150	ENSPKIG00000006442	riok1	100	63.009	Paramormyrops_kingsleyae
ENSLACG00000000300	RIOK1	100	66.608	ENSPSIG00000006488	RIOK1	99	66.783	Pelodiscus_sinensis
ENSLACG00000000300	RIOK1	70	62.720	ENSPMGG00000017807	riok1	89	65.123	Periophthalmus_magnuspinnatus
ENSLACG00000000300	RIOK1	100	64.583	ENSPEMG00000017844	Riok1	100	64.757	Peromyscus_maniculatus_bairdii
ENSLACG00000000300	RIOK1	72	59.080	ENSPMAG00000006351	riok1	98	59.759	Petromyzon_marinus
ENSLACG00000000300	RIOK1	80	68.062	ENSPCIG00000012653	RIOK1	94	63.483	Phascolarctos_cinereus
ENSLACG00000000300	RIOK1	98	55.635	ENSPFOG00000011532	riok1	99	56.014	Poecilia_formosa
ENSLACG00000000300	RIOK1	98	56.172	ENSPLAG00000001341	riok1	99	56.194	Poecilia_latipinna
ENSLACG00000000300	RIOK1	98	55.635	ENSPMEG00000007710	riok1	99	56.014	Poecilia_mexicana
ENSLACG00000000300	RIOK1	98	56.373	ENSPREG00000009237	riok1	90	60.656	Poecilia_reticulata
ENSLACG00000000300	RIOK1	100	66.551	ENSPPYG00000016207	RIOK1	100	67.190	Pongo_abelii
ENSLACG00000000300	RIOK1	87	78.249	ENSPCAG00000007892	RIOK1	87	78.249	Procavia_capensis
ENSLACG00000000300	RIOK1	100	67.304	ENSPVAG00000014091	RIOK1	100	66.783	Pteropus_vampyrus
ENSLACG00000000300	RIOK1	57	72.136	ENSPNYG00000004465	riok1	100	72.136	Pundamilia_nyererei
ENSLACG00000000300	RIOK1	100	63.509	ENSPNAG00000015435	riok1	100	62.807	Pygocentrus_nattereri
ENSLACG00000000300	RIOK1	100	64.706	ENSRNOG00000014049	Riok1	100	71.121	Rattus_norvegicus
ENSLACG00000000300	RIOK1	100	66.667	ENSRBIG00000036685	RIOK1	100	66.667	Rhinopithecus_bieti
ENSLACG00000000300	RIOK1	100	66.667	ENSRROG00000036611	RIOK1	100	66.667	Rhinopithecus_roxellana
ENSLACG00000000300	RIOK1	51	37.855	YOR119C	RIO1	88	35.477	Saccharomyces_cerevisiae
ENSLACG00000000300	RIOK1	100	64.212	ENSSBOG00000012588	RIOK1	100	67.133	Saimiri_boliviensis_boliviensis
ENSLACG00000000300	RIOK1	71	71.569	ENSSHAG00000003091	RIOK1	93	65.918	Sarcophilus_harrisii
ENSLACG00000000300	RIOK1	87	68.357	ENSSFOG00015001035	riok1	99	64.821	Scleropages_formosus
ENSLACG00000000300	RIOK1	57	67.183	ENSSDUG00000007291	riok1	100	67.492	Seriola_dumerili
ENSLACG00000000300	RIOK1	99	60.963	ENSSLDG00000017657	riok1	99	60.963	Seriola_lalandi_dorsalis
ENSLACG00000000300	RIOK1	85	61.618	ENSSPUG00000007624	RIOK1	83	61.618	Sphenodon_punctatus
ENSLACG00000000300	RIOK1	99	59.358	ENSSPAG00000022710	riok1	100	60.071	Stegastes_partitus
ENSLACG00000000300	RIOK1	100	65.385	ENSSSCG00000001024	RIOK1	100	64.336	Sus_scrofa
ENSLACG00000000300	RIOK1	100	65.210	ENSTGUG00000002331	RIOK1	100	66.025	Taeniopygia_guttata
ENSLACG00000000300	RIOK1	52	62.245	ENSTRUG00000001575	-	100	62.245	Takifugu_rubripes
ENSLACG00000000300	RIOK1	77	52.500	ENSTRUG00000002854	riok1	79	61.702	Takifugu_rubripes
ENSLACG00000000300	RIOK1	99	53.833	ENSTNIG00000003078	riok1	98	53.833	Tetraodon_nigroviridis
ENSLACG00000000300	RIOK1	100	65.979	ENSTBEG00000016730	RIOK1	100	65.799	Tupaia_belangeri
ENSLACG00000000300	RIOK1	68	73.969	ENSTTRG00000017335	RIOK1	81	73.969	Tursiops_truncatus
ENSLACG00000000300	RIOK1	94	65.492	ENSUAMG00000003721	RIOK1	96	65.306	Ursus_americanus
ENSLACG00000000300	RIOK1	100	66.957	ENSUMAG00000018461	RIOK1	100	66.957	Ursus_maritimus
ENSLACG00000000300	RIOK1	60	63.900	ENSVPAG00000010813	-	63	63.900	Vicugna_pacos
ENSLACG00000000300	RIOK1	86	70.935	ENSVVUG00000005018	RIOK1	100	66.492	Vulpes_vulpes
ENSLACG00000000300	RIOK1	87	64.919	ENSXETG00000020436	riok1	86	65.567	Xenopus_tropicalis
ENSLACG00000000300	RIOK1	83	60.213	ENSXCOG00000000245	riok1	100	61.064	Xiphophorus_couchianus
ENSLACG00000000300	RIOK1	72	62.683	ENSXMAG00000014572	riok1	85	59.292	Xiphophorus_maculatus