EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000000323 (Gene tree)
Gene ID: 102366660
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: RING finger protein 17
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 54948 bases
Position: chrJH129279.1:1345-56292
Accession: 102366660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000357	TUDOR	PF00567.24	8.2e-73	1	4
ENSLACP00000000357	TUDOR	PF00567.24	8.2e-73	2	4
ENSLACP00000000357	TUDOR	PF00567.24	8.2e-73	3	4
ENSLACP00000000357	TUDOR	PF00567.24	8.2e-73	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000359	RNF17-201	3423	XM_006011386	ENSLACP00000000357	1141 (aa)	-	H2ZSI6

Gene Model

Click here to download ENSLACG00000000323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000000323	RNF17	80	35.503	ENSLACG00000014578	TDRD15	90	35.503

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000323	RNF17	99	48.042	ENSG00000132972	RNF17	83	52.344	Homo_sapiens
ENSLACG00000000323	RNF17	81	37.913	ENSAPOG00000017034	rnf17	62	37.913	Acanthochromis_polyacanthus
ENSLACG00000000323	RNF17	100	48.823	ENSAMEG00000017340	RNF17	88	48.823	Ailuropoda_melanoleuca
ENSLACG00000000323	RNF17	97	34.399	ENSAOCG00000018283	rnf17	70	34.462	Amphiprion_ocellaris
ENSLACG00000000323	RNF17	99	33.129	ENSAPEG00000022338	rnf17	76	33.304	Amphiprion_percula
ENSLACG00000000323	RNF17	81	37.513	ENSATEG00000002067	rnf17	78	33.979	Anabas_testudineus
ENSLACG00000000323	RNF17	99	44.231	ENSAPLG00000003969	RNF17	80	44.314	Anas_platyrhynchos
ENSLACG00000000323	RNF17	99	42.411	ENSACAG00000001418	RNF17	85	42.496	Anolis_carolinensis
ENSLACG00000000323	RNF17	94	46.218	ENSANAG00000029969	RNF17	71	46.118	Aotus_nancymaae
ENSLACG00000000323	RNF17	81	34.926	ENSACLG00000018279	rnf17	56	35.032	Astatotilapia_calliptera
ENSLACG00000000323	RNF17	81	35.867	ENSAMXG00000011002	rnf17	62	35.974	Astyanax_mexicanus
ENSLACG00000000323	RNF17	68	52.756	ENSBTAG00000000278	RNF17	99	52.756	Bos_taurus
ENSLACG00000000323	RNF17	99	48.116	ENSCJAG00000018937	RNF17	70	52.344	Callithrix_jacchus
ENSLACG00000000323	RNF17	100	47.997	ENSCAFG00000007418	RNF17	85	48.429	Canis_familiaris
ENSLACG00000000323	RNF17	81	53.838	ENSCHIG00000026716	RNF17	94	52.756	Capra_hircus
ENSLACG00000000323	RNF17	100	48.384	ENSTSYG00000000365	RNF17	81	51.175	Carlito_syrichta
ENSLACG00000000323	RNF17	79	44.912	ENSCAPG00000012908	RNF17	70	44.912	Cavia_aperea
ENSLACG00000000323	RNF17	99	48.155	ENSCCAG00000026725	RNF17	83	51.969	Cebus_capucinus
ENSLACG00000000323	RNF17	99	48.174	ENSCATG00000040352	RNF17	83	52.344	Cercocebus_atys
ENSLACG00000000323	RNF17	100	46.492	ENSCLAG00000004127	RNF17	89	46.492	Chinchilla_lanigera
ENSLACG00000000323	RNF17	99	48.087	ENSCSAG00000018019	RNF17	78	48.087	Chlorocebus_sabaeus
ENSLACG00000000323	RNF17	74	69.403	ENSCHOG00000013310	RNF17	62	69.403	Choloepus_hoffmanni
ENSLACG00000000323	RNF17	99	48.000	ENSCPBG00000020920	RNF17	83	48.043	Chrysemys_picta_bellii
ENSLACG00000000323	RNF17	99	47.826	ENSCANG00000032927	RNF17	83	52.344	Colobus_angolensis_palliatus
ENSLACG00000000323	RNF17	99	46.830	ENSCGRG00001022658	Rnf17	88	46.915	Cricetulus_griseus_chok1gshd
ENSLACG00000000323	RNF17	99	46.830	ENSCGRG00000009924	Rnf17	88	46.915	Cricetulus_griseus_crigri
ENSLACG00000000323	RNF17	81	35.155	ENSCSEG00000008626	rnf17	65	35.653	Cynoglossus_semilaevis
ENSLACG00000000323	RNF17	74	37.975	ENSCVAG00000017008	rnf17	66	37.975	Cyprinodon_variegatus
ENSLACG00000000323	RNF17	97	32.687	ENSDARG00000056387	rnf17	68	32.687	Danio_rerio
ENSLACG00000000323	RNF17	100	46.459	ENSDNOG00000006115	RNF17	88	46.627	Dasypus_novemcinctus
ENSLACG00000000323	RNF17	51	53.581	ENSEASG00005001421	-	99	53.581	Equus_asinus_asinus
ENSLACG00000000323	RNF17	100	48.092	ENSECAG00000017152	RNF17	87	48.261	Equus_caballus
ENSLACG00000000323	RNF17	81	53.237	ENSEEUG00000000332	RNF17	69	40.840	Erinaceus_europaeus
ENSLACG00000000323	RNF17	100	35.124	ENSELUG00000005626	rnf17	85	35.289	Esox_lucius
ENSLACG00000000323	RNF17	100	49.085	ENSFCAG00000004914	RNF17	99	53.281	Felis_catus
ENSLACG00000000323	RNF17	92	48.109	ENSFALG00000008766	RNF17	69	48.109	Ficedula_albicollis
ENSLACG00000000323	RNF17	100	46.213	ENSFDAG00000017857	RNF17	74	46.213	Fukomys_damarensis
ENSLACG00000000323	RNF17	83	35.650	ENSFHEG00000014822	rnf17	60	35.650	Fundulus_heteroclitus
ENSLACG00000000323	RNF17	78	36.151	ENSGAFG00000004463	rnf17	67	36.313	Gambusia_affinis
ENSLACG00000000323	RNF17	99	49.831	ENSGAGG00000016999	RNF17	76	49.831	Gopherus_agassizii
ENSLACG00000000323	RNF17	99	47.868	ENSGGOG00000014491	RNF17	83	52.344	Gorilla_gorilla
ENSLACG00000000323	RNF17	81	35.032	ENSHBUG00000003554	rnf17	70	31.588	Haplochromis_burtoni
ENSLACG00000000323	RNF17	100	46.043	ENSHGLG00000007270	RNF17	88	46.043	Heterocephalus_glaber_female
ENSLACG00000000323	RNF17	100	45.957	ENSHGLG00100017393	RNF17	88	45.957	Heterocephalus_glaber_male
ENSLACG00000000323	RNF17	83	34.454	ENSHCOG00000017676	rnf17	70	34.244	Hippocampus_comes
ENSLACG00000000323	RNF17	81	37.608	ENSIPUG00000001087	rnf17	60	37.608	Ictalurus_punctatus
ENSLACG00000000323	RNF17	100	47.039	ENSJJAG00000016584	Rnf17	84	47.208	Jaculus_jaculus
ENSLACG00000000323	RNF17	82	36.459	ENSKMAG00000013403	rnf17	71	32.326	Kryptolebias_marmoratus
ENSLACG00000000323	RNF17	81	38.960	ENSLBEG00000014910	rnf17	63	38.960	Labrus_bergylta
ENSLACG00000000323	RNF17	97	31.473	ENSLOCG00000010768	rnf17	68	31.473	Lepisosteus_oculatus
ENSLACG00000000323	RNF17	99	48.174	ENSMFAG00000032388	RNF17	83	52.344	Macaca_fascicularis
ENSLACG00000000323	RNF17	99	48.174	ENSMMUG00000014610	RNF17	83	52.344	Macaca_mulatta
ENSLACG00000000323	RNF17	99	48.174	ENSMNEG00000011234	RNF17	84	52.344	Macaca_nemestrina
ENSLACG00000000323	RNF17	99	48.174	ENSMLEG00000030227	RNF17	83	48.174	Mandrillus_leucophaeus
ENSLACG00000000323	RNF17	86	35.562	ENSMAMG00000020403	rnf17	71	35.562	Mastacembelus_armatus
ENSLACG00000000323	RNF17	81	35.032	ENSMZEG00005019166	rnf17	56	35.138	Maylandia_zebra
ENSLACG00000000323	RNF17	82	43.744	ENSMGAG00000015138	RNF17	76	43.744	Meleagris_gallopavo
ENSLACG00000000323	RNF17	99	44.606	ENSMAUG00000004788	Rnf17	88	44.692	Mesocricetus_auratus
ENSLACG00000000323	RNF17	100	48.693	ENSMICG00000010364	RNF17	88	48.693	Microcebus_murinus
ENSLACG00000000323	RNF17	58	51.624	ENSMOCG00000011818	-	99	51.624	Microtus_ochrogaster
ENSLACG00000000323	RNF17	81	33.868	ENSMMOG00000019514	rnf17	68	35.446	Mola_mola
ENSLACG00000000323	RNF17	99	49.620	ENSMODG00000007827	RNF17	84	50.042	Monodelphis_domestica
ENSLACG00000000323	RNF17	85	38.065	ENSMALG00000016943	rnf17	74	38.065	Monopterus_albus
ENSLACG00000000323	RNF17	99	45.802	MGP_CAROLIEiJ_G0019337	Rnf17	88	45.802	Mus_caroli
ENSLACG00000000323	RNF17	99	45.868	ENSMUSG00000000365	Rnf17	88	45.868	Mus_musculus
ENSLACG00000000323	RNF17	99	46.923	MGP_PahariEiJ_G0030355	Rnf17	83	46.923	Mus_pahari
ENSLACG00000000323	RNF17	99	45.953	MGP_SPRETEiJ_G0020228	Rnf17	88	45.953	Mus_spretus
ENSLACG00000000323	RNF17	100	48.561	ENSMPUG00000013305	RNF17	88	48.474	Mustela_putorius_furo
ENSLACG00000000323	RNF17	100	47.997	ENSMLUG00000003903	RNF17	88	47.997	Myotis_lucifugus
ENSLACG00000000323	RNF17	99	46.843	ENSNGAG00000013553	Rnf17	88	46.843	Nannospalax_galili
ENSLACG00000000323	RNF17	81	37.696	ENSNBRG00000012006	rnf17	64	37.696	Neolamprologus_brichardi
ENSLACG00000000323	RNF17	99	47.561	ENSNLEG00000013780	RNF17	83	52.083	Nomascus_leucogenys
ENSLACG00000000323	RNF17	77	49.833	ENSOPRG00000016743	-	55	49.833	Ochotona_princeps
ENSLACG00000000323	RNF17	58	46.094	ENSODEG00000005443	-	99	46.094	Octodon_degus
ENSLACG00000000323	RNF17	82	34.357	ENSONIG00000015746	rnf17	99	34.357	Oreochromis_niloticus
ENSLACG00000000323	RNF17	100	46.245	ENSOCUG00000007384	RNF17	88	46.447	Oryctolagus_cuniculus
ENSLACG00000000323	RNF17	99	32.088	ENSORLG00000012818	rnf17	99	32.095	Oryzias_latipes
ENSLACG00000000323	RNF17	99	32.586	ENSORLG00020009879	-	78	35.116	Oryzias_latipes_hni
ENSLACG00000000323	RNF17	99	32.530	ENSORLG00015013027	-	88	32.534	Oryzias_latipes_hsok
ENSLACG00000000323	RNF17	80	34.881	ENSOMEG00000009891	rnf17	71	34.881	Oryzias_melastigma
ENSLACG00000000323	RNF17	100	48.718	ENSOGAG00000014803	RNF17	88	48.718	Otolemur_garnettii
ENSLACG00000000323	RNF17	100	47.049	ENSOARG00000014641	RNF17	85	47.133	Ovis_aries
ENSLACG00000000323	RNF17	88	48.989	ENSPPAG00000028779	RNF17	83	52.083	Pan_paniscus
ENSLACG00000000323	RNF17	100	48.825	ENSPPRG00000009230	RNF17	94	52.742	Panthera_pardus
ENSLACG00000000323	RNF17	100	48.997	ENSPTIG00000001738	RNF17	94	53.281	Panthera_tigris_altaica
ENSLACG00000000323	RNF17	99	47.694	ENSPTRG00000005713	RNF17	83	52.083	Pan_troglodytes
ENSLACG00000000323	RNF17	99	47.822	ENSPANG00000007640	RNF17	83	52.231	Papio_anubis
ENSLACG00000000323	RNF17	81	37.754	ENSPKIG00000001648	rnf17	79	37.754	Paramormyrops_kingsleyae
ENSLACG00000000323	RNF17	81	55.000	ENSPSIG00000011245	RNF17	87	55.000	Pelodiscus_sinensis
ENSLACG00000000323	RNF17	99	46.571	ENSPEMG00000008693	Rnf17	88	46.655	Peromyscus_maniculatus_bairdii
ENSLACG00000000323	RNF17	80	55.293	ENSPCIG00000009190	-	88	55.293	Phascolarctos_cinereus
ENSLACG00000000323	RNF17	99	31.134	ENSPFOG00000007124	rnf17	83	31.292	Poecilia_formosa
ENSLACG00000000323	RNF17	99	31.467	ENSPLAG00000006198	rnf17	83	31.861	Poecilia_latipinna
ENSLACG00000000323	RNF17	99	31.552	ENSPMEG00000022432	rnf17	83	31.814	Poecilia_mexicana
ENSLACG00000000323	RNF17	80	35.861	ENSPREG00000001414	rnf17	76	36.452	Poecilia_reticulata
ENSLACG00000000323	RNF17	99	47.694	ENSPPYG00000005215	RNF17	78	47.694	Pongo_abelii
ENSLACG00000000323	RNF17	58	67.227	ENSPCAG00000002665	RNF17	52	67.227	Procavia_capensis
ENSLACG00000000323	RNF17	69	63.736	ENSPCOG00000020211	RNF17	52	61.702	Propithecus_coquereli
ENSLACG00000000323	RNF17	100	45.812	ENSPVAG00000013021	RNF17	79	45.812	Pteropus_vampyrus
ENSLACG00000000323	RNF17	81	38.602	ENSPNAG00000027505	rnf17	64	39.032	Pygocentrus_nattereri
ENSLACG00000000323	RNF17	99	46.543	ENSRNOG00000008059	Rnf17	88	46.627	Rattus_norvegicus
ENSLACG00000000323	RNF17	99	46.785	ENSRBIG00000027010	RNF17	79	48.944	Rhinopithecus_bieti
ENSLACG00000000323	RNF17	99	47.917	ENSRROG00000022801	RNF17	83	52.083	Rhinopithecus_roxellana
ENSLACG00000000323	RNF17	99	48.246	ENSSBOG00000021661	RNF17	69	53.704	Saimiri_boliviensis_boliviensis
ENSLACG00000000323	RNF17	99	50.042	ENSSHAG00000005609	RNF17	85	50.381	Sarcophilus_harrisii
ENSLACG00000000323	RNF17	81	38.009	ENSSFOG00015023037	rnf17	82	38.009	Scleropages_formosus
ENSLACG00000000323	RNF17	81	37.005	ENSSMAG00000007429	rnf17	61	37.005	Scophthalmus_maximus
ENSLACG00000000323	RNF17	81	36.831	ENSSDUG00000013530	rnf17	77	33.651	Seriola_dumerili
ENSLACG00000000323	RNF17	81	37.263	ENSSLDG00000019577	rnf17	78	32.941	Seriola_lalandi_dorsalis
ENSLACG00000000323	RNF17	90	50.313	ENSSARG00000003016	RNF17	66	50.313	Sorex_araneus
ENSLACG00000000323	RNF17	83	53.293	ENSSPUG00000008917	RNF17	68	52.959	Sphenodon_punctatus
ENSLACG00000000323	RNF17	81	37.434	ENSSPAG00000001925	rnf17	64	37.326	Stegastes_partitus
ENSLACG00000000323	RNF17	99	47.079	ENSSSCG00000009572	RNF17	87	51.195	Sus_scrofa
ENSLACG00000000323	RNF17	61	48.217	ENSTGUG00000011267	-	100	48.217	Taeniopygia_guttata
ENSLACG00000000323	RNF17	81	36.296	ENSTRUG00000015498	rnf17	73	36.296	Takifugu_rubripes
ENSLACG00000000323	RNF17	81	35.814	ENSTNIG00000015681	rnf17	88	35.814	Tetraodon_nigroviridis
ENSLACG00000000323	RNF17	98	49.757	ENSTBEG00000000282	RNF17	81	49.757	Tupaia_belangeri
ENSLACG00000000323	RNF17	100	50.784	ENSTTRG00000012698	RNF17	85	50.784	Tursiops_truncatus
ENSLACG00000000323	RNF17	78	63.014	ENSVPAG00000011388	RNF17	63	63.014	Vicugna_pacos
ENSLACG00000000323	RNF17	100	47.948	ENSVVUG00000006226	RNF17	88	48.300	Vulpes_vulpes
ENSLACG00000000323	RNF17	76	41.190	ENSXETG00000034020	RNF17	94	45.692	Xenopus_tropicalis
ENSLACG00000000323	RNF17	97	32.837	ENSXCOG00000018295	rnf17	78	32.982	Xiphophorus_couchianus
ENSLACG00000000323	RNF17	97	33.274	ENSXMAG00000014747	rnf17	77	33.274	Xiphophorus_maculatus