EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000000325 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1099 bases
Position: chrJH129611.1:1351-2449
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000359	zf-CCHC	PF00098.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000361	-	966	-	ENSLACP00000000359	322 (aa)	-	H2ZSI8

Gene Model

Click here to download ENSLACG00000000325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000000325	-	85	55.442	ENSLACG00000010543	-	100	55.219
ENSLACG00000000325	-	99	62.918	ENSLACG00000002363	-	82	62.614
ENSLACG00000000325	-	70	84.914	ENSLACG00000012373	-	79	84.914
ENSLACG00000000325	-	99	83.537	ENSLACG00000002768	-	86	83.537
ENSLACG00000000325	-	85	54.072	ENSLACG00000012908	-	100	52.941
ENSLACG00000000325	-	99	54.734	ENSLACG00000004689	-	94	54.734
ENSLACG00000000325	-	99	54.913	ENSLACG00000002057	-	100	54.913
ENSLACG00000000325	-	98	85.981	ENSLACG00000017942	-	100	85.981
ENSLACG00000000325	-	89	67.834	ENSLACG00000005078	-	100	65.152
ENSLACG00000000325	-	98	69.578	ENSLACG00000006128	-	99	68.675
ENSLACG00000000325	-	95	61.728	ENSLACG00000004531	-	98	61.420
ENSLACG00000000325	-	99	61.538	ENSLACG00000008039	-	100	61.424
ENSLACG00000000325	-	96	65.094	ENSLACG00000004000	-	100	64.465
ENSLACG00000000325	-	99	48.955	ENSLACG00000002836	-	100	47.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000325	-	71	44.610	ENSCPBG00000028243	-	85	44.737	Chrysemys_picta_bellii
ENSLACG00000000325	-	68	42.308	ENSGAGG00000002892	-	98	41.379	Gopherus_agassizii
ENSLACG00000000325	-	99	49.118	ENSXETG00000019379	-	83	48.378	Xenopus_tropicalis
ENSLACG00000000325	-	99	50.448	ENSXETG00000005082	ankrd31	83	50.149	Xenopus_tropicalis
ENSLACG00000000325	-	99	50.448	ENSXETG00000006819	-	76	50.149	Xenopus_tropicalis
ENSLACG00000000325	-	99	48.657	ENSXETG00000026538	-	82	48.358	Xenopus_tropicalis