EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLACG00000000646 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Plus strand
Length
14317 bases
Position
chrJH128686.1:3802-18118
Accession
102354373
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000000721RRM_1PF00076.221.3e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000000727-3746XM_006009767ENSLACP00000000721228 (aa)-H2ZTK0
Gene Model
Click here to download ENSLACG00000000646's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000646's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000000646pabpn17989.560ENSG00000100836PABPN19981.053Homo_sapiens
ENSLACG00000000646pabpn17890.449ENSG00000258643BCL2L2-PABPN15387.640Homo_sapiens
ENSLACG00000000646pabpn18584.536ENSAPOG00000016425pabpn17588.202Acanthochromis_polyacanthus
ENSLACG00000000646pabpn17890.449ENSAMEG00000007048BCL2L2-PABPN19487.640Ailuropoda_melanoleuca
ENSLACG00000000646pabpn18482.474ENSACIG00000021744pabpn18785.897Amphilophus_citrinellus
ENSLACG00000000646pabpn18185.405ENSAOCG00000015805pabpn17588.202Amphiprion_ocellaris
ENSLACG00000000646pabpn18185.405ENSAPEG00000009623pabpn17588.202Amphiprion_percula
ENSLACG00000000646pabpn18185.946ENSATEG00000020531pabpn17588.764Anabas_testudineus
ENSLACG00000000646pabpn17588.372ENSACAG00000006185-6386.111Anolis_carolinensis
ENSLACG00000000646pabpn17989.444ENSANAG00000024513-6487.640Aotus_nancymaae
ENSLACG00000000646pabpn18482.051ENSACLG00000016374pabpn16185.475Astatotilapia_calliptera
ENSLACG00000000646pabpn19477.376ENSAMXG00000000452pabpn18786.624Astyanax_mexicanus
ENSLACG00000000646pabpn17987.778ENSBTAG00000053753-6785.556Bos_taurus
ENSLACG00000000646pabpn17488.235ENSBTAG00000050594-6094.118Bos_taurus
ENSLACG00000000646pabpn17989.560ENSBTAG00000006884PABPN16087.778Bos_taurus
ENSLACG00000000646pabpn16656.291WBGene00003904pabp-28950.820Caenorhabditis_elegans
ENSLACG00000000646pabpn17989.444ENSCJAG00000007960-6687.640Callithrix_jacchus
ENSLACG00000000646pabpn16887.179ENSCJAG00000004407-7883.974Callithrix_jacchus
ENSLACG00000000646pabpn19977.434ENSCAFG00000011482PABPN15887.640Canis_familiaris
ENSLACG00000000646pabpn17989.444ENSCAFG00020006651-5887.640Canis_lupus_dingo
ENSLACG00000000646pabpn17989.444ENSCAFG00020007298-5887.640Canis_lupus_dingo
ENSLACG00000000646pabpn17989.444ENSCHIG00000012184PABPN15887.640Capra_hircus
ENSLACG00000000646pabpn17890.449ENSTSYG00000033996BCL2L2-PABPN18785.897Carlito_syrichta
ENSLACG00000000646pabpn16189.286ENSCAPG00000009461-10085.714Cavia_aperea
ENSLACG00000000646pabpn18384.817ENSCPOG00000025574PABPN15887.079Cavia_porcellus
ENSLACG00000000646pabpn17989.444ENSCCAG00000033954BCL2L2-PABPN16687.640Cebus_capucinus
ENSLACG00000000646pabpn17890.449ENSCATG00000038536BCL2L2-PABPN16687.640Cercocebus_atys
ENSLACG00000000646pabpn16187.857ENSCLAG00000012423PABPN15383.099Chinchilla_lanigera
ENSLACG00000000646pabpn17987.778ENSCSAG00000016036PABPN15885.955Chlorocebus_sabaeus
ENSLACG00000000646pabpn17982.418ENSCHOG00000004798BCL2L2-PABPN17879.670Choloepus_hoffmanni
ENSLACG00000000646pabpn16885.897ENSCPBG00000026060-8783.333Chrysemys_picta_bellii
ENSLACG00000000646pabpn16471.034ENSCING00000012468-6970.064Ciona_intestinalis
ENSLACG00000000646pabpn15770.229ENSCSAVG00000002001-7868.182Ciona_savignyi
ENSLACG00000000646pabpn17975.556ENSCANG00000030980-6471.667Colobus_angolensis_palliatus
ENSLACG00000000646pabpn17890.449ENSCANG00000009750BCL2L2-PABPN18785.897Colobus_angolensis_palliatus
ENSLACG00000000646pabpn18384.817ENSCGRG00001019696Pabpn18785.256Cricetulus_griseus_chok1gshd
ENSLACG00000000646pabpn16593.960ENSCGRG00000011102Pabpn19293.960Cricetulus_griseus_crigri
ENSLACG00000000646pabpn18285.106ENSCSEG00000008774pabpn17687.571Cynoglossus_semilaevis
ENSLACG00000000646pabpn19274.884ENSCVAG00000003152pabpn17684.916Cyprinodon_variegatus
ENSLACG00000000646pabpn18584.021ENSDARG00000045373pabpn18088.202Danio_rerio
ENSLACG00000000646pabpn17854.494ENSDARG00000087996pabpn1l7266.942Danio_rerio
ENSLACG00000000646pabpn17989.444ENSDNOG00000023682PABPN15887.640Dasypus_novemcinctus
ENSLACG00000000646pabpn18384.817ENSDORG00000028966-5887.079Dipodomys_ordii
ENSLACG00000000646pabpn15985.821ENSDORG00000023928-8585.366Dipodomys_ordii
ENSLACG00000000646pabpn19256.459FBgn0005648Pabp26766.883Drosophila_melanogaster
ENSLACG00000000646pabpn18277.128ENSEBUG00000002322pabpn17679.888Eptatretus_burgeri
ENSLACG00000000646pabpn17989.444ENSEASG00005011716PABPN15887.640Equus_asinus_asinus
ENSLACG00000000646pabpn17989.444ENSECAG00000011652PABPN16087.640Equus_caballus
ENSLACG00000000646pabpn18381.675ENSEEUG00000012973-6084.270Erinaceus_europaeus
ENSLACG00000000646pabpn18184.946ENSELUG00000022654pabpn17487.709Esox_lucius
ENSLACG00000000646pabpn17989.444ENSFCAG00000031922PABPN15887.640Felis_catus
ENSLACG00000000646pabpn16888.462ENSFDAG00000018381BCL2L2-PABPN18785.256Fukomys_damarensis
ENSLACG00000000646pabpn19175.355ENSFHEG00000007215pabpn17682.022Fundulus_heteroclitus
ENSLACG00000000646pabpn18582.051ENSGMOG00000003922pabpn16288.827Gadus_morhua
ENSLACG00000000646pabpn19176.056ENSGAFG00000017099pabpn17685.000Gambusia_affinis
ENSLACG00000000646pabpn18584.021ENSGACG00000002167pabpn17779.058Gasterosteus_aculeatus
ENSLACG00000000646pabpn17989.444ENSGGOG00000022683-6687.640Gorilla_gorilla
ENSLACG00000000646pabpn19765.022ENSGGOG00000039675-6572.472Gorilla_gorilla
ENSLACG00000000646pabpn17777.401ENSGGOG00000025919-9073.529Gorilla_gorilla
ENSLACG00000000646pabpn18184.865ENSHBUG00000019523pabpn17587.640Haplochromis_burtoni
ENSLACG00000000646pabpn18670.732ENSHGLG00000018588-6081.366Heterocephalus_glaber_female
ENSLACG00000000646pabpn18384.817ENSHGLG00000002927-9592.105Heterocephalus_glaber_female
ENSLACG00000000646pabpn16767.532ENSHGLG00000009842-7375.194Heterocephalus_glaber_female
ENSLACG00000000646pabpn15786.154ENSHGLG00100018935-7186.154Heterocephalus_glaber_male
ENSLACG00000000646pabpn17990.000ENSHGLG00100006673-9592.105Heterocephalus_glaber_male
ENSLACG00000000646pabpn18670.732ENSHGLG00100015565-6181.366Heterocephalus_glaber_male
ENSLACG00000000646pabpn18184.324ENSHCOG00000004655pabpn17687.079Hippocampus_comes
ENSLACG00000000646pabpn18182.796ENSIPUG00000000180-7785.955Ictalurus_punctatus
ENSLACG00000000646pabpn18185.405ENSIPUG00000008085PABPN17588.764Ictalurus_punctatus
ENSLACG00000000646pabpn16889.103ENSSTOG00000029847BCL2L2-PABPN18785.897Ictidomys_tridecemlineatus
ENSLACG00000000646pabpn16889.103ENSJJAG00000023507Gm205218785.897Jaculus_jaculus
ENSLACG00000000646pabpn19476.471ENSKMAG00000018748pabpn17687.151Kryptolebias_marmoratus
ENSLACG00000000646pabpn18585.052ENSLBEG00000027266pabpn17588.764Labrus_bergylta
ENSLACG00000000646pabpn17565.318ENSLOCG00000004694pabpn1l8265.556Lepisosteus_oculatus
ENSLACG00000000646pabpn19478.182ENSLOCG00000000796pabpn16488.764Lepisosteus_oculatus
ENSLACG00000000646pabpn16189.928ENSLAFG00000031227-9286.331Loxodonta_africana
ENSLACG00000000646pabpn15681.395ENSMFAG00000031355-9079.845Macaca_fascicularis
ENSLACG00000000646pabpn17890.449ENSMFAG00000032183BCL2L2-PABPN18785.897Macaca_fascicularis
ENSLACG00000000646pabpn17890.503ENSMMUG00000014747BCL2L2-PABPN19285.821Macaca_mulatta
ENSLACG00000000646pabpn17972.678ENSMMUG00000048382-6071.038Macaca_mulatta
ENSLACG00000000646pabpn17673.034ENSMNEG00000035750-9079.845Macaca_nemestrina
ENSLACG00000000646pabpn17890.449ENSMNEG00000045065BCL2L2-PABPN16687.640Macaca_nemestrina
ENSLACG00000000646pabpn17890.449ENSMLEG00000043862BCL2L2-PABPN18785.897Mandrillus_leucophaeus
ENSLACG00000000646pabpn16869.427ENSMLEG00000034623-9077.519Mandrillus_leucophaeus
ENSLACG00000000646pabpn18585.052ENSMAMG00000007979pabpn16288.764Mastacembelus_armatus
ENSLACG00000000646pabpn18584.021ENSMZEG00005011904pabpn16287.640Maylandia_zebra
ENSLACG00000000646pabpn17889.888ENSMAUG00000007383Gm205215987.079Mesocricetus_auratus
ENSLACG00000000646pabpn17890.449ENSMICG00000010002BCL2L2-PABPN16687.640Microcebus_murinus
ENSLACG00000000646pabpn17889.326ENSMOCG00000018557Gm205219193.377Microtus_ochrogaster
ENSLACG00000000646pabpn18584.536ENSMMOG00000005405pabpn17588.202Mola_mola
ENSLACG00000000646pabpn17988.333ENSMODG00000004535-5887.640Monodelphis_domestica
ENSLACG00000000646pabpn18585.052ENSMALG00000019612pabpn16288.764Monopterus_albus
ENSLACG00000000646pabpn18483.938MGP_CAROLIEiJ_G0019277Pabpn19093.289Mus_caroli
ENSLACG00000000646pabpn17888.764MGP_CAROLIEiJ_G0019276Gm205215385.955Mus_caroli
ENSLACG00000000646pabpn18484.456ENSMUSG00000022194Pabpn19093.289Mus_musculus
ENSLACG00000000646pabpn17889.326ENSMUSG00000092232Gm205215386.517Mus_musculus
ENSLACG00000000646pabpn18484.456MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSLACG00000000646pabpn17889.326MGP_PahariEiJ_G0030294Gm205215386.517Mus_pahari
ENSLACG00000000646pabpn18484.456MGP_SPRETEiJ_G0020166Pabpn19093.289Mus_spretus
ENSLACG00000000646pabpn17889.326MGP_SPRETEiJ_G0020165Gm205215386.517Mus_spretus
ENSLACG00000000646pabpn16989.241ENSMPUG00000006775-9386.076Mustela_putorius_furo
ENSLACG00000000646pabpn18180.628ENSMLUG00000012452-5884.444Myotis_lucifugus
ENSLACG00000000646pabpn17888.202ENSMLUG00000003800-9485.955Myotis_lucifugus
ENSLACG00000000646pabpn17985.556ENSMLUG00000028677-6584.746Myotis_lucifugus
ENSLACG00000000646pabpn17890.449ENSNGAG00000019529Gm205215387.640Nannospalax_galili
ENSLACG00000000646pabpn18584.021ENSNBRG00000023955pabpn18785.897Neolamprologus_brichardi
ENSLACG00000000646pabpn17890.449ENSNLEG00000015007-6387.640Nomascus_leucogenys
ENSLACG00000000646pabpn17972.626ENSNLEG00000030598-6576.829Nomascus_leucogenys
ENSLACG00000000646pabpn15866.917ENSNLEG00000035292-9466.917Nomascus_leucogenys
ENSLACG00000000646pabpn17889.888ENSODEG00000002083BCL2L2-PABPN15887.079Octodon_degus
ENSLACG00000000646pabpn17278.313ENSODEG00000011555-8276.129Octodon_degus
ENSLACG00000000646pabpn18373.684ENSODEG00000003739-5876.271Octodon_degus
ENSLACG00000000646pabpn18584.021ENSONIG00000008112pabpn16287.640Oreochromis_niloticus
ENSLACG00000000646pabpn15888.806ENSOANG00000009218-9286.567Ornithorhynchus_anatinus
ENSLACG00000000646pabpn17988.889ENSOCUG00000016174PABPN16587.079Oryctolagus_cuniculus
ENSLACG00000000646pabpn19477.273ENSORLG00000027900pabpn17488.136Oryzias_latipes
ENSLACG00000000646pabpn19177.725ENSORLG00020004681pabpn16088.202Oryzias_latipes_hni
ENSLACG00000000646pabpn19177.725ENSORLG00015000018pabpn17588.202Oryzias_latipes_hsok
ENSLACG00000000646pabpn19477.727ENSOMEG00000016618pabpn16588.701Oryzias_melastigma
ENSLACG00000000646pabpn17989.444ENSOGAG00000008710PABPN15887.640Otolemur_garnettii
ENSLACG00000000646pabpn17890.449ENSPPAG00000028984BCL2L2-PABPN19386.076Pan_paniscus
ENSLACG00000000646pabpn16872.436ENSPPAG00000039421-8670.513Pan_paniscus
ENSLACG00000000646pabpn17989.444ENSPPRG00000010567PABPN15887.640Panthera_pardus
ENSLACG00000000646pabpn16889.103ENSPTIG00000001063BCL2L2-PABPN18785.897Panthera_tigris_altaica
ENSLACG00000000646pabpn17890.449ENSPTRG00000006167BCL2L26687.640Pan_troglodytes
ENSLACG00000000646pabpn19067.633ENSPTRG00000047273-6571.348Pan_troglodytes
ENSLACG00000000646pabpn17890.449ENSPANG00000021100BCL2L2-PABPN16687.640Papio_anubis
ENSLACG00000000646pabpn17972.678ENSPANG00000023326-9079.070Papio_anubis
ENSLACG00000000646pabpn18584.021ENSPKIG00000008144-6288.202Paramormyrops_kingsleyae
ENSLACG00000000646pabpn18282.632ENSPKIG00000018052pabpn17688.889Paramormyrops_kingsleyae
ENSLACG00000000646pabpn17068.519ENSPKIG00000008340pabpn1l7868.519Paramormyrops_kingsleyae
ENSLACG00000000646pabpn15085.965ENSPSIG00000011959-8485.217Pelodiscus_sinensis
ENSLACG00000000646pabpn19476.818ENSPMGG00000022027pabpn16488.202Periophthalmus_magnuspinnatus
ENSLACG00000000646pabpn17889.888ENSPEMG00000008332Gm205219093.960Peromyscus_maniculatus_bairdii
ENSLACG00000000646pabpn17872.778ENSPMAG00000006212pabpn17674.595Petromyzon_marinus
ENSLACG00000000646pabpn17988.333ENSPCIG00000027751-5887.640Phascolarctos_cinereus
ENSLACG00000000646pabpn19176.056ENSPFOG00000010351pabpn17585.000Poecilia_formosa
ENSLACG00000000646pabpn19475.225ENSPLAG00000022696pabpn16284.444Poecilia_latipinna
ENSLACG00000000646pabpn19176.056ENSPMEG00000020856pabpn17685.000Poecilia_mexicana
ENSLACG00000000646pabpn19475.676ENSPREG00000011278pabpn17685.000Poecilia_reticulata
ENSLACG00000000646pabpn17989.560ENSPPYG00000005663PABPN16487.778Pongo_abelii
ENSLACG00000000646pabpn17873.889ENSPCAG00000005902PABPN16071.910Procavia_capensis
ENSLACG00000000646pabpn17989.444ENSPCOG00000028047BCL2L2-PABPN16687.640Propithecus_coquereli
ENSLACG00000000646pabpn19080.583ENSPVAG00000005270PABPN15094.118Pteropus_vampyrus
ENSLACG00000000646pabpn18184.865ENSPNYG00000013182pabpn17587.640Pundamilia_nyererei
ENSLACG00000000646pabpn18585.052ENSPNAG00000023526pabpn17588.764Pygocentrus_nattereri
ENSLACG00000000646pabpn16272.727ENSPNAG00000021666pabpn1l7670.701Pygocentrus_nattereri
ENSLACG00000000646pabpn18384.817ENSRNOG00000042195Pabpn15987.079Rattus_norvegicus
ENSLACG00000000646pabpn18671.000ENSRBIG00000039547-6573.333Rhinopithecus_bieti
ENSLACG00000000646pabpn18673.604ENSRBIG00000042811-6383.660Rhinopithecus_bieti
ENSLACG00000000646pabpn17990.556ENSRBIG00000040762BCL2L2-PABPN15587.778Rhinopithecus_bieti
ENSLACG00000000646pabpn17990.556ENSRROG00000045535BCL2L2-PABPN18785.897Rhinopithecus_roxellana
ENSLACG00000000646pabpn18671.000ENSRROG00000040409-6573.333Rhinopithecus_roxellana
ENSLACG00000000646pabpn17884.293ENSSBOG00000026930BCL2L2-PABPN19386.076Saimiri_boliviensis_boliviensis
ENSLACG00000000646pabpn19362.667ENSSHAG00000007707-7573.034Sarcophilus_harrisii
ENSLACG00000000646pabpn17888.827ENSSHAG00000014841-8287.151Sarcophilus_harrisii
ENSLACG00000000646pabpn17986.111ENSSFOG00015014718pabpn17587.640Scleropages_formosus
ENSLACG00000000646pabpn19279.621ENSSFOG00015012565pabpn18286.413Scleropages_formosus
ENSLACG00000000646pabpn18063.934ENSSFOG00015015833pabpn1l8265.385Scleropages_formosus
ENSLACG00000000646pabpn18585.052ENSSMAG00000020157pabpn17588.764Scophthalmus_maximus
ENSLACG00000000646pabpn18585.052ENSSDUG00000020582pabpn16288.764Seriola_dumerili
ENSLACG00000000646pabpn18185.946ENSSLDG00000007118pabpn17588.764Seriola_lalandi_dorsalis
ENSLACG00000000646pabpn16587.248ENSSPUG00000018308-8785.256Sphenodon_punctatus
ENSLACG00000000646pabpn18584.103ENSSPAG00000021658pabpn17686.592Stegastes_partitus
ENSLACG00000000646pabpn17890.449ENSSSCG00000002023PABPN15887.640Sus_scrofa
ENSLACG00000000646pabpn18266.839ENSSSCG00000034805-5276.613Sus_scrofa
ENSLACG00000000646pabpn18585.567ENSTRUG00000023664pabpn17589.326Takifugu_rubripes
ENSLACG00000000646pabpn18685.204ENSTNIG00000005369pabpn18288.889Tetraodon_nigroviridis
ENSLACG00000000646pabpn17989.444ENSUAMG00000024460PABPN15887.640Ursus_americanus
ENSLACG00000000646pabpn17890.449ENSUMAG00000014288BCL2L2-PABPN15389.888Ursus_maritimus
ENSLACG00000000646pabpn17890.503ENSVVUG00000019912BCL2L2-PABPN17087.709Vulpes_vulpes
ENSLACG00000000646pabpn17993.296ENSXETG00000014597pabpn15994.350Xenopus_tropicalis
ENSLACG00000000646pabpn16873.885ENSXCOG00000005158pabpn18582.639Xiphophorus_couchianus
ENSLACG00000000646pabpn19176.526ENSXMAG00000006196pabpn17685.556Xiphophorus_maculatus

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