EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000000714 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1062 bases
Position: chrJH132916.1:4345-5406
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000795	RVT_1	PF00078.27	2.7e-11	1	1
ENSLACP00000000796	RVT_1	PF00078.27	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000803	-	639	-	ENSLACP00000000795	213 (aa)	-	H2ZTS4
ENSLACT00000000804	-	588	-	ENSLACP00000000796	196 (aa)	-	H2ZTS5

Gene Model

Click here to download ENSLACG00000000714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000000714	-	91	30.348	ENSLACG00000003900	-	61	30.348
ENSLACG00000000714	-	58	34.783	ENSLACG00000014604	-	63	34.746
ENSLACG00000000714	-	84	35.976	ENSLACG00000010373	-	67	35.976
ENSLACG00000000714	-	99	30.102	ENSLACG00000001892	-	54	30.102
ENSLACG00000000714	-	99	39.286	ENSLACG00000000029	-	54	39.109
ENSLACG00000000714	-	99	32.487	ENSLACG00000010227	-	82	32.039
ENSLACG00000000714	-	87	44.118	ENSLACG00000000981	-	85	41.885
ENSLACG00000000714	-	98	32.653	ENSLACG00000002249	-	75	32.381
ENSLACG00000000714	-	97	33.503	ENSLACG00000016284	-	88	34.010
ENSLACG00000000714	-	87	42.353	ENSLACG00000004732	-	56	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000714	-	99	30.198	ENSAPOG00000008925	-	54	30.392	Acanthochromis_polyacanthus
ENSLACG00000000714	-	96	32.632	ENSACLG00000010403	-	63	32.161	Astatotilapia_calliptera
ENSLACG00000000714	-	98	37.500	ENSACLG00000021935	-	61	35.821	Astatotilapia_calliptera
ENSLACG00000000714	-	98	36.667	ENSACLG00000006798	-	67	36.667	Astatotilapia_calliptera
ENSLACG00000000714	-	99	35.052	ENSACLG00000013289	-	58	34.848	Astatotilapia_calliptera
ENSLACG00000000714	-	98	35.417	ENSACLG00000006549	-	55	33.831	Astatotilapia_calliptera
ENSLACG00000000714	-	99	35.897	ENSAMXG00000031032	-	53	34.975	Astyanax_mexicanus
ENSLACG00000000714	-	98	38.021	ENSAMXG00000029182	-	50	37.879	Astyanax_mexicanus
ENSLACG00000000714	-	100	37.563	ENSCPBG00000001687	-	67	37.745	Chrysemys_picta_bellii
ENSLACG00000000714	-	96	32.804	ENSCVAG00000001415	-	52	31.818	Cyprinodon_variegatus
ENSLACG00000000714	-	95	31.183	ENSEBUG00000000828	-	50	31.183	Eptatretus_burgeri
ENSLACG00000000714	-	98	34.123	ENSGAFG00000008149	-	74	34.123	Gambusia_affinis
ENSLACG00000000714	-	97	38.542	ENSGAGG00000022131	-	67	37.745	Gopherus_agassizii
ENSLACG00000000714	-	98	37.824	ENSHBUG00000009088	-	55	36.453	Haplochromis_burtoni
ENSLACG00000000714	-	98	30.698	ENSKMAG00000010799	-	61	30.876	Kryptolebias_marmoratus
ENSLACG00000000714	-	98	31.443	ENSLBEG00000003912	-	52	30.882	Labrus_bergylta
ENSLACG00000000714	-	97	31.937	ENSLOCG00000017292	-	59	32.474	Lepisosteus_oculatus
ENSLACG00000000714	-	99	36.082	ENSMALG00000020245	-	72	36.000	Monopterus_albus
ENSLACG00000000714	-	100	36.036	ENSMALG00000005075	-	68	36.036	Monopterus_albus
ENSLACG00000000714	-	99	32.990	ENSNBRG00000002477	-	59	32.178	Neolamprologus_brichardi
ENSLACG00000000714	-	100	31.364	ENSNBRG00000002791	-	71	31.364	Neolamprologus_brichardi
ENSLACG00000000714	-	100	35.204	ENSONIG00000018991	-	69	34.826	Oreochromis_niloticus
ENSLACG00000000714	-	96	35.979	ENSORLG00000022411	-	54	35.354	Oryzias_latipes
ENSLACG00000000714	-	98	36.453	ENSORLG00000022742	-	57	34.597	Oryzias_latipes
ENSLACG00000000714	-	96	34.392	ENSORLG00020021288	-	60	33.838	Oryzias_latipes_hni
ENSLACG00000000714	-	98	34.896	ENSORLG00020002705	-	59	34.896	Oryzias_latipes_hni
ENSLACG00000000714	-	98	36.453	ENSORLG00020004454	-	54	35.211	Oryzias_latipes_hni
ENSLACG00000000714	-	99	35.567	ENSORLG00015021822	-	53	34.653	Oryzias_latipes_hsok
ENSLACG00000000714	-	96	36.316	ENSOMEG00000007764	-	66	35.859	Oryzias_melastigma
ENSLACG00000000714	-	96	38.624	ENSPSIG00000014032	-	58	37.879	Pelodiscus_sinensis
ENSLACG00000000714	-	96	37.566	ENSPSIG00000001249	-	57	36.869	Pelodiscus_sinensis
ENSLACG00000000714	-	80	36.306	ENSPSIG00000001531	-	82	36.306	Pelodiscus_sinensis
ENSLACG00000000714	-	98	35.052	ENSPSIG00000002033	-	62	33.816	Pelodiscus_sinensis
ENSLACG00000000714	-	97	37.696	ENSPSIG00000001816	-	73	37.563	Pelodiscus_sinensis
ENSLACG00000000714	-	87	32.164	ENSPNYG00000004598	-	56	32.164	Pundamilia_nyererei
ENSLACG00000000714	-	81	30.189	ENSPNAG00000001979	-	61	30.189	Pygocentrus_nattereri
ENSLACG00000000714	-	98	35.751	ENSPNAG00000015949	-	52	35.468	Pygocentrus_nattereri
ENSLACG00000000714	-	98	36.269	ENSSFOG00015015399	-	57	35.294	Scleropages_formosus
ENSLACG00000000714	-	82	33.750	ENSTGUG00000018372	-	78	32.787	Taeniopygia_guttata
ENSLACG00000000714	-	82	35.625	ENSTGUG00000018474	-	77	34.426	Taeniopygia_guttata
ENSLACG00000000714	-	85	34.132	ENSTGUG00000018141	-	74	33.158	Taeniopygia_guttata
ENSLACG00000000714	-	82	33.750	ENSTGUG00000018469	-	78	32.787	Taeniopygia_guttata
ENSLACG00000000714	-	96	37.566	ENSTRUG00000024970	-	65	36.869	Takifugu_rubripes
ENSLACG00000000714	-	98	32.857	ENSXMAG00000027711	-	63	32.857	Xiphophorus_maculatus