EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000000770 (Gene tree)
Gene ID: 102353329
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 36219 bases
Position: chrJH128730.1:4898-41116
Accession: 102353329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000858	eIF-3c_N	PF05470.12	6.4e-258	1	2
ENSLACP00000000858	eIF-3c_N	PF05470.12	6.4e-258	2	2
ENSLACP00000000857	eIF-3c_N	PF05470.12	3.3e-257	1	2
ENSLACP00000000857	eIF-3c_N	PF05470.12	3.3e-257	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000865	-	4744	XM_006009937	ENSLACP00000000857	914 (aa)	XP_006009999	H2ZTY6
ENSLACT00000000866	-	2835	-	ENSLACP00000000858	945 (aa)	-	H2ZTY7

Gene Model

Click here to download ENSLACG00000000770's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000770	eif3c	100	80.305	ENSG00000184110	EIF3C	100	92.405	Homo_sapiens
ENSLACG00000000770	eif3c	100	80.413	ENSG00000205609	EIF3CL	100	79.389	Homo_sapiens
ENSLACG00000000770	eif3c	99	78.349	ENSAPOG00000024092	eif3c	90	88.889	Acanthochromis_polyacanthus
ENSLACG00000000770	eif3c	100	80.413	ENSAMEG00000015454	-	100	78.844	Ailuropoda_melanoleuca
ENSLACG00000000770	eif3c	99	77.140	ENSACIG00000015082	eif3c	92	89.078	Amphilophus_citrinellus
ENSLACG00000000770	eif3c	99	78.564	ENSAOCG00000021466	eif3c	92	88.586	Amphiprion_ocellaris
ENSLACG00000000770	eif3c	99	78.564	ENSAPEG00000010521	eif3c	92	88.586	Amphiprion_percula
ENSLACG00000000770	eif3c	99	80.109	ENSATEG00000019001	eif3c	99	79.415	Anabas_testudineus
ENSLACG00000000770	eif3c	99	82.116	ENSACAG00000005937	-	98	82.517	Anolis_carolinensis
ENSLACG00000000770	eif3c	100	80.196	ENSANAG00000020640	-	100	78.517	Aotus_nancymaae
ENSLACG00000000770	eif3c	94	83.412	ENSACLG00000009347	eif3c	91	88.376	Astatotilapia_calliptera
ENSLACG00000000770	eif3c	83	85.197	ENSACLG00000009322	eif3c	87	87.175	Astatotilapia_calliptera
ENSLACG00000000770	eif3c	100	79.389	ENSAMXG00000020949	eif3c	97	79.533	Astyanax_mexicanus
ENSLACG00000000770	eif3c	100	79.935	ENSBTAG00000006543	EIF3CL	100	78.689	Bos_taurus
ENSLACG00000000770	eif3c	100	42.782	WBGene00001226	eif-3.C	62	48.110	Caenorhabditis_elegans
ENSLACG00000000770	eif3c	100	80.087	ENSCJAG00000006341	-	100	78.408	Callithrix_jacchus
ENSLACG00000000770	eif3c	100	80.413	ENSCAFG00000017143	-	100	78.953	Canis_familiaris
ENSLACG00000000770	eif3c	100	80.413	ENSCAFG00020017587	-	100	78.953	Canis_lupus_dingo
ENSLACG00000000770	eif3c	100	79.935	ENSCHIG00000024795	-	100	78.689	Capra_hircus
ENSLACG00000000770	eif3c	100	80.087	ENSTSYG00000003486	-	100	78.517	Carlito_syrichta
ENSLACG00000000770	eif3c	96	72.891	ENSCAPG00000015887	-	100	71.026	Cavia_aperea
ENSLACG00000000770	eif3c	100	80.196	ENSCPOG00000007533	-	100	78.735	Cavia_porcellus
ENSLACG00000000770	eif3c	99	69.103	ENSCCAG00000029099	-	99	64.941	Cebus_capucinus
ENSLACG00000000770	eif3c	100	76.170	ENSCCAG00000027724	-	100	73.828	Cebus_capucinus
ENSLACG00000000770	eif3c	100	79.826	ENSCCAG00000034928	-	100	78.470	Cebus_capucinus
ENSLACG00000000770	eif3c	100	80.196	ENSCATG00000032673	-	100	78.517	Cercocebus_atys
ENSLACG00000000770	eif3c	100	80.196	ENSCLAG00000011094	-	100	78.735	Chinchilla_lanigera
ENSLACG00000000770	eif3c	100	80.196	ENSCSAG00000006297	-	100	78.517	Chlorocebus_sabaeus
ENSLACG00000000770	eif3c	55	70.270	ENSCHOG00000003120	-	85	70.270	Choloepus_hoffmanni
ENSLACG00000000770	eif3c	82	71.800	ENSCPBG00000012407	-	91	76.687	Chrysemys_picta_bellii
ENSLACG00000000770	eif3c	100	80.196	ENSCANG00000033626	-	100	78.517	Colobus_angolensis_palliatus
ENSLACG00000000770	eif3c	100	79.171	ENSCGRG00001015265	EIF3C	100	77.754	Cricetulus_griseus_chok1gshd
ENSLACG00000000770	eif3c	99	79.605	ENSCSEG00000017770	eif3c	99	78.587	Cynoglossus_semilaevis
ENSLACG00000000770	eif3c	99	78.326	ENSCVAG00000005402	eif3c	97	79.623	Cyprinodon_variegatus
ENSLACG00000000770	eif3c	99	80.740	ENSDARG00000016443	eif3c	97	80.667	Danio_rerio
ENSLACG00000000770	eif3c	100	80.522	ENSDNOG00000031497	-	100	78.953	Dasypus_novemcinctus
ENSLACG00000000770	eif3c	100	79.978	ENSDORG00000016471	Eif3c	100	78.517	Dipodomys_ordii
ENSLACG00000000770	eif3c	98	51.375	FBgn0034258	eIF3c	95	51.670	Drosophila_melanogaster
ENSLACG00000000770	eif3c	92	85.909	ENSETEG00000013527	-	89	88.947	Echinops_telfairi
ENSLACG00000000770	eif3c	99	63.978	ENSEBUG00000001629	eif3c	68	72.447	Eptatretus_burgeri
ENSLACG00000000770	eif3c	100	80.305	ENSECAG00000008746	-	100	78.735	Equus_caballus
ENSLACG00000000770	eif3c	63	57.317	ENSEEUG00000000726	-	64	57.216	Erinaceus_europaeus
ENSLACG00000000770	eif3c	87	80.175	ENSEEUG00000006148	-	100	78.750	Erinaceus_europaeus
ENSLACG00000000770	eif3c	99	79.913	ENSELUG00000022257	eif3c	91	89.244	Esox_lucius
ENSLACG00000000770	eif3c	100	80.631	ENSFCAG00000015782	-	100	78.844	Felis_catus
ENSLACG00000000770	eif3c	100	80.196	ENSFDAG00000003588	-	100	78.735	Fukomys_damarensis
ENSLACG00000000770	eif3c	99	80.107	ENSFHEG00000014154	EIF3C	97	78.918	Fundulus_heteroclitus
ENSLACG00000000770	eif3c	97	78.427	ENSGMOG00000016885	eif3c	100	78.788	Gadus_morhua
ENSLACG00000000770	eif3c	96	79.682	ENSGACG00000007652	eif3c	98	78.906	Gasterosteus_aculeatus
ENSLACG00000000770	eif3c	92	80.047	ENSGAGG00000006666	-	98	79.348	Gopherus_agassizii
ENSLACG00000000770	eif3c	99	78.798	ENSGGOG00000026919	EIF3C	100	78.709	Gorilla_gorilla
ENSLACG00000000770	eif3c	53	81.467	ENSGGOG00000022677	-	100	81.467	Gorilla_gorilla
ENSLACG00000000770	eif3c	100	80.413	ENSHGLG00000011445	EIF3C	100	78.844	Heterocephalus_glaber_female
ENSLACG00000000770	eif3c	100	80.413	ENSHGLG00100000217	EIF3C	100	78.844	Heterocephalus_glaber_male
ENSLACG00000000770	eif3c	99	78.219	ENSHCOG00000019694	eif3c	97	78.889	Hippocampus_comes
ENSLACG00000000770	eif3c	100	79.055	ENSIPUG00000016878	eif3c	97	80.979	Ictalurus_punctatus
ENSLACG00000000770	eif3c	100	80.196	ENSSTOG00000021278	-	100	78.517	Ictidomys_tridecemlineatus
ENSLACG00000000770	eif3c	100	79.434	ENSJJAG00000012722	Eif3c	100	77.972	Jaculus_jaculus
ENSLACG00000000770	eif3c	99	80.617	ENSKMAG00000021662	eif3c	97	78.370	Kryptolebias_marmoratus
ENSLACG00000000770	eif3c	99	80.574	ENSLBEG00000023370	eif3c	97	78.690	Labrus_bergylta
ENSLACG00000000770	eif3c	100	79.978	ENSLAFG00000027426	-	100	78.408	Loxodonta_africana
ENSLACG00000000770	eif3c	100	80.196	ENSMFAG00000041930	-	100	78.517	Macaca_fascicularis
ENSLACG00000000770	eif3c	100	80.196	ENSMMUG00000011798	-	100	78.517	Macaca_mulatta
ENSLACG00000000770	eif3c	100	80.196	ENSMNEG00000023915	-	100	78.517	Macaca_nemestrina
ENSLACG00000000770	eif3c	100	80.196	ENSMLEG00000027529	-	100	78.517	Mandrillus_leucophaeus
ENSLACG00000000770	eif3c	99	78.885	ENSMAMG00000012512	eif3c	94	87.946	Mastacembelus_armatus
ENSLACG00000000770	eif3c	83	85.033	ENSMZEG00005013685	eif3c	88	87.002	Maylandia_zebra
ENSLACG00000000770	eif3c	94	83.412	ENSMZEG00005013699	eif3c	87	88.376	Maylandia_zebra
ENSLACG00000000770	eif3c	100	79.171	ENSMAUG00000010621	Eif3c	100	77.972	Mesocricetus_auratus
ENSLACG00000000770	eif3c	100	80.522	ENSMICG00000036748	-	100	78.953	Microcebus_murinus
ENSLACG00000000770	eif3c	100	77.317	ENSMOCG00000004204	Eif3c	100	76.009	Microtus_ochrogaster
ENSLACG00000000770	eif3c	99	76.425	ENSMMOG00000001572	eif3c	70	87.223	Mola_mola
ENSLACG00000000770	eif3c	100	80.413	ENSMODG00000015579	-	98	79.621	Monodelphis_domestica
ENSLACG00000000770	eif3c	90	83.594	ENSMALG00000008907	eif3c	91	88.364	Monopterus_albus
ENSLACG00000000770	eif3c	100	79.171	MGP_CAROLIEiJ_G0030451	Eif3c	100	77.511	Mus_caroli
ENSLACG00000000770	eif3c	100	79.171	ENSMUSG00000030738	Eif3c	100	77.511	Mus_musculus
ENSLACG00000000770	eif3c	100	79.062	MGP_PahariEiJ_G0013661	Eif3c	100	77.293	Mus_pahari
ENSLACG00000000770	eif3c	100	79.171	MGP_SPRETEiJ_G0031565	Eif3c	100	77.511	Mus_spretus
ENSLACG00000000770	eif3c	96	80.700	ENSMPUG00000012732	-	100	79.072	Mustela_putorius_furo
ENSLACG00000000770	eif3c	100	80.087	ENSMLUG00000015558	-	100	78.953	Myotis_lucifugus
ENSLACG00000000770	eif3c	93	70.909	ENSNGAG00000010901	-	98	70.909	Nannospalax_galili
ENSLACG00000000770	eif3c	100	79.978	ENSNGAG00000007177	-	100	78.517	Nannospalax_galili
ENSLACG00000000770	eif3c	100	69.785	ENSNLEG00000001425	-	91	76.667	Nomascus_leucogenys
ENSLACG00000000770	eif3c	100	67.247	ENSMEUG00000009939	-	98	66.704	Notamacropus_eugenii
ENSLACG00000000770	eif3c	85	62.121	ENSMEUG00000005317	-	89	67.619	Notamacropus_eugenii
ENSLACG00000000770	eif3c	100	79.543	ENSOPRG00000000931	-	100	78.299	Ochotona_princeps
ENSLACG00000000770	eif3c	100	80.087	ENSODEG00000013508	-	100	78.626	Octodon_degus
ENSLACG00000000770	eif3c	66	65.289	ENSONIG00000011434	eif3c	96	65.417	Oreochromis_niloticus
ENSLACG00000000770	eif3c	100	77.814	ENSOANG00000011410	-	98	77.168	Ornithorhynchus_anatinus
ENSLACG00000000770	eif3c	100	80.413	ENSOCUG00000022489	-	100	78.953	Oryctolagus_cuniculus
ENSLACG00000000770	eif3c	99	78.714	ENSORLG00000006318	eif3c	95	79.235	Oryzias_latipes
ENSLACG00000000770	eif3c	99	78.714	ENSORLG00020015713	eif3c	89	88.601	Oryzias_latipes_hni
ENSLACG00000000770	eif3c	99	78.603	ENSORLG00015013772	eif3c	96	79.933	Oryzias_latipes_hsok
ENSLACG00000000770	eif3c	99	78.186	ENSOMEG00000020450	eif3c	64	88.533	Oryzias_melastigma
ENSLACG00000000770	eif3c	100	80.196	ENSOGAG00000012737	-	100	78.626	Otolemur_garnettii
ENSLACG00000000770	eif3c	100	79.935	ENSOARG00000002892	-	100	78.689	Ovis_aries
ENSLACG00000000770	eif3c	100	80.631	ENSPPRG00000012336	-	100	78.844	Panthera_pardus
ENSLACG00000000770	eif3c	100	80.631	ENSPTIG00000011712	-	100	78.844	Panthera_tigris_altaica
ENSLACG00000000770	eif3c	100	80.196	ENSPANG00000021151	-	100	78.517	Papio_anubis
ENSLACG00000000770	eif3c	99	81.020	ENSPKIG00000002049	eif3c	97	80.377	Paramormyrops_kingsleyae
ENSLACG00000000770	eif3c	89	88.538	ENSPMGG00000005409	eif3c	93	89.041	Periophthalmus_magnuspinnatus
ENSLACG00000000770	eif3c	100	78.953	ENSPEMG00000010899	Eif3c	100	77.596	Peromyscus_maniculatus_bairdii
ENSLACG00000000770	eif3c	100	80.413	ENSPCIG00000025206	-	98	79.733	Phascolarctos_cinereus
ENSLACG00000000770	eif3c	99	79.443	ENSPFOG00000004476	eif3c	97	79.181	Poecilia_formosa
ENSLACG00000000770	eif3c	99	75.987	ENSPLAG00000017480	eif3c	90	89.212	Poecilia_latipinna
ENSLACG00000000770	eif3c	99	79.421	ENSPMEG00000019512	eif3c	97	78.936	Poecilia_mexicana
ENSLACG00000000770	eif3c	99	75.900	ENSPREG00000023139	eif3c	90	89.041	Poecilia_reticulata
ENSLACG00000000770	eif3c	100	77.802	ENSPPYG00000007227	-	100	76.118	Pongo_abelii
ENSLACG00000000770	eif3c	66	85.240	ENSPCAG00000012710	-	100	84.884	Procavia_capensis
ENSLACG00000000770	eif3c	100	80.522	ENSPCOG00000019289	-	100	78.953	Propithecus_coquereli
ENSLACG00000000770	eif3c	100	80.305	ENSPVAG00000005804	-	100	78.735	Pteropus_vampyrus
ENSLACG00000000770	eif3c	67	71.779	ENSPNYG00000016530	eif3c	74	90.566	Pundamilia_nyererei
ENSLACG00000000770	eif3c	100	80.196	ENSPNAG00000024040	eif3c	91	89.384	Pygocentrus_nattereri
ENSLACG00000000770	eif3c	100	79.171	ENSRNOG00000018761	Eif3c	100	77.620	Rattus_norvegicus
ENSLACG00000000770	eif3c	97	80.609	ENSRBIG00000044009	-	98	77.394	Rhinopithecus_bieti
ENSLACG00000000770	eif3c	100	80.196	ENSRROG00000043626	-	100	78.517	Rhinopithecus_roxellana
ENSLACG00000000770	eif3c	74	31.900	YMR309C	-	81	31.900	Saccharomyces_cerevisiae
ENSLACG00000000770	eif3c	100	80.087	ENSSBOG00000032155	-	100	78.408	Saimiri_boliviensis_boliviensis
ENSLACG00000000770	eif3c	96	80.631	ENSSHAG00000011808	-	98	79.931	Sarcophilus_harrisii
ENSLACG00000000770	eif3c	100	79.828	ENSSFOG00015021823	eif3c	97	80.311	Scleropages_formosus
ENSLACG00000000770	eif3c	99	78.867	ENSSMAG00000016638	eif3c	97	79.218	Scophthalmus_maximus
ENSLACG00000000770	eif3c	99	79.185	ENSSDUG00000023117	eif3c	99	79.108	Seriola_dumerili
ENSLACG00000000770	eif3c	99	79.077	ENSSLDG00000009706	eif3c	91	88.702	Seriola_lalandi_dorsalis
ENSLACG00000000770	eif3c	99	81.967	ENSSPUG00000016470	-	98	82.589	Sphenodon_punctatus
ENSLACG00000000770	eif3c	99	79.847	ENSSPAG00000000426	eif3c	98	78.801	Stegastes_partitus
ENSLACG00000000770	eif3c	100	80.196	ENSSSCG00000034927	-	100	78.626	Sus_scrofa
ENSLACG00000000770	eif3c	100	78.098	ENSTRUG00000008951	eif3c	96	79.800	Takifugu_rubripes
ENSLACG00000000770	eif3c	99	77.778	ENSTNIG00000015210	eif3c	99	75.589	Tetraodon_nigroviridis
ENSLACG00000000770	eif3c	100	80.413	ENSTTRG00000005880	-	100	78.844	Tursiops_truncatus
ENSLACG00000000770	eif3c	72	83.156	ENSUAMG00000001127	-	91	90.764	Ursus_americanus
ENSLACG00000000770	eif3c	100	80.413	ENSUMAG00000010927	-	100	78.844	Ursus_maritimus
ENSLACG00000000770	eif3c	100	79.108	ENSVVUG00000025970	-	100	77.644	Vulpes_vulpes
ENSLACG00000000770	eif3c	100	82.468	ENSXETG00000002941	eif3c	97	81.535	Xenopus_tropicalis
ENSLACG00000000770	eif3c	99	81.148	ENSXMAG00000013796	eif3c	98	78.587	Xiphophorus_maculatus