EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000000797 (Gene tree)
Gene ID: 102356577
Gene Symbol: -
Alias: -
Full Name: three prime repair exonuclease 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 729 bases
Position: chrAFYH01270959.1:5252-5980
Accession: 102356577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000885	RNase_T	PF00929.24	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000894	-	729	XM_006014203	ENSLACP00000000885	242 (aa)	XP_006014265	H2ZU14

Gene Model

Click here to download ENSLACG00000000797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000797	-	94	45.992	ENSAMEG00000008933	TREX2	84	45.992	Ailuropoda_melanoleuca
ENSLACG00000000797	-	88	48.387	ENSACAG00000012912	TREX2	94	48.387	Anolis_carolinensis
ENSLACG00000000797	-	90	44.397	ENSACAG00000008936	TREX1	97	44.397	Anolis_carolinensis
ENSLACG00000000797	-	90	46.053	ENSCAFG00000019185	TREX2	82	46.053	Canis_familiaris
ENSLACG00000000797	-	89	45.778	ENSCAFG00020023190	TREX2	72	45.778	Canis_lupus_dingo
ENSLACG00000000797	-	93	45.106	ENSCAPG00000004768	TREX2	88	45.106	Cavia_aperea
ENSLACG00000000797	-	93	45.106	ENSCPOG00000025702	TREX2	99	45.106	Cavia_porcellus
ENSLACG00000000797	-	93	45.957	ENSCLAG00000002698	TREX2	99	45.957	Chinchilla_lanigera
ENSLACG00000000797	-	88	49.302	ENSCPBG00000008273	TREX2	81	49.302	Chrysemys_picta_bellii
ENSLACG00000000797	-	90	45.374	ENSCGRG00001012110	Trex2	96	45.374	Cricetulus_griseus_chok1gshd
ENSLACG00000000797	-	90	41.410	ENSDORG00000016464	Trex1	75	41.410	Dipodomys_ordii
ENSLACG00000000797	-	83	41.981	ENSEBUG00000006412	TREX1	83	41.981	Eptatretus_burgeri
ENSLACG00000000797	-	91	45.887	ENSEASG00005019558	TREX2	83	45.887	Equus_asinus_asinus
ENSLACG00000000797	-	91	45.887	ENSECAG00000016012	TREX2	83	45.887	Equus_caballus
ENSLACG00000000797	-	94	45.148	ENSFCAG00000018938	TREX2	99	45.148	Felis_catus
ENSLACG00000000797	-	91	45.887	ENSFDAG00000014463	TREX2	97	45.887	Fukomys_damarensis
ENSLACG00000000797	-	92	45.494	ENSHGLG00000008010	TREX2	98	45.494	Heterocephalus_glaber_female
ENSLACG00000000797	-	92	45.494	ENSHGLG00100011918	TREX2	98	45.494	Heterocephalus_glaber_male
ENSLACG00000000797	-	93	45.726	ENSSTOG00000027213	TREX2	99	45.726	Ictidomys_tridecemlineatus
ENSLACG00000000797	-	92	44.635	ENSJJAG00000012484	Trex2	98	44.635	Jaculus_jaculus
ENSLACG00000000797	-	94	43.697	ENSMOCG00000001305	Trex2	100	43.697	Microtus_ochrogaster
ENSLACG00000000797	-	89	45.133	ENSMODG00000025322	-	94	45.133	Monodelphis_domestica
ENSLACG00000000797	-	89	45.575	ENSMODG00000022848	-	94	45.575	Monodelphis_domestica
ENSLACG00000000797	-	92	45.064	MGP_CAROLIEiJ_G0033149	Trex2	98	45.064	Mus_caroli
ENSLACG00000000797	-	92	45.494	ENSMUSG00000031372	Trex2	98	45.494	Mus_musculus
ENSLACG00000000797	-	89	46.018	MGP_PahariEiJ_G0031692	Trex2	95	46.018	Mus_pahari
ENSLACG00000000797	-	92	45.494	MGP_SPRETEiJ_G0034304	Trex2	98	45.494	Mus_spretus
ENSLACG00000000797	-	90	46.696	ENSMPUG00000019552	TREX2	96	46.696	Mustela_putorius_furo
ENSLACG00000000797	-	93	46.186	ENSMLUG00000027143	TREX2	98	46.186	Myotis_lucifugus
ENSLACG00000000797	-	89	45.133	ENSMEUG00000016646	TREX2	100	45.133	Notamacropus_eugenii
ENSLACG00000000797	-	94	46.414	ENSODEG00000019142	TREX2	90	46.414	Octodon_degus
ENSLACG00000000797	-	92	47.845	ENSOANG00000000686	TREX2	99	47.845	Ornithorhynchus_anatinus
ENSLACG00000000797	-	93	45.957	ENSOGAG00000033175	TREX2	92	45.957	Otolemur_garnettii
ENSLACG00000000797	-	94	45.570	ENSPPRG00000017457	TREX2	99	45.570	Panthera_pardus
ENSLACG00000000797	-	81	42.211	ENSPSIG00000006116	TREX2	86	42.211	Pelodiscus_sinensis
ENSLACG00000000797	-	94	45.148	ENSPEMG00000004918	Trex2	99	45.148	Peromyscus_maniculatus_bairdii
ENSLACG00000000797	-	91	44.589	ENSPCIG00000009700	TREX2	97	44.589	Phascolarctos_cinereus
ENSLACG00000000797	-	87	46.154	ENSPCAG00000005411	TREX2	85	46.154	Procavia_capensis
ENSLACG00000000797	-	94	45.570	ENSPVAG00000001122	TREX2	85	45.570	Pteropus_vampyrus
ENSLACG00000000797	-	90	45.374	ENSRNOG00000056983	Trex2	96	45.374	Rattus_norvegicus
ENSLACG00000000797	-	95	45.868	ENSSHAG00000004059	TREX2	97	45.868	Sarcophilus_harrisii
ENSLACG00000000797	-	86	46.330	ENSSPUG00000015575	-	93	46.330	Sphenodon_punctatus
ENSLACG00000000797	-	90	48.182	ENSSPUG00000012477	-	93	48.416	Sphenodon_punctatus
ENSLACG00000000797	-	90	48.416	ENSSPUG00000012496	-	92	48.416	Sphenodon_punctatus
ENSLACG00000000797	-	90	48.182	ENSSPUG00000012467	-	93	48.416	Sphenodon_punctatus
ENSLACG00000000797	-	90	48.182	ENSSPUG00000012485	-	93	48.416	Sphenodon_punctatus
ENSLACG00000000797	-	93	45.726	ENSUAMG00000027544	TREX2	87	45.726	Ursus_americanus
ENSLACG00000000797	-	93	46.154	ENSVVUG00000029714	TREX2	88	46.154	Vulpes_vulpes