EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000000806 (Gene tree)
Gene ID: 102362904
Gene Symbol: -
Alias: -
Full Name: telomerase-binding protein EST1A-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 15659 bases
Position: chrJH129111.1:5364-21022
Accession: 102362904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000896	EST1	PF10374.9	1.2e-14	1	1
ENSLACP00000000896	EST1_DNA_bind	PF10373.9	3.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000905	-	2489	XM_006010994	ENSLACP00000000896	803 (aa)	XP_006011056	H2ZU25

Gene Model

Click here to download ENSLACG00000000806's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000806	-	98	58.824	ENSG00000070366	SMG6	55	57.753	Homo_sapiens
ENSLACG00000000806	-	98	59.356	ENSAMEG00000007632	SMG6	55	58.240	Ailuropoda_melanoleuca
ENSLACG00000000806	-	98	58.852	ENSANAG00000035760	SMG6	55	58.608	Aotus_nancymaae
ENSLACG00000000806	-	98	59.603	ENSBTAG00000000267	SMG6	55	58.860	Bos_taurus
ENSLACG00000000806	-	98	58.549	ENSCJAG00000001820	SMG6	55	58.303	Callithrix_jacchus
ENSLACG00000000806	-	98	58.714	ENSCAFG00000019260	SMG6	55	57.973	Canis_familiaris
ENSLACG00000000806	-	98	58.714	ENSCAFG00020009770	SMG6	55	57.973	Canis_lupus_dingo
ENSLACG00000000806	-	98	59.383	ENSCHIG00000021998	SMG6	55	58.180	Capra_hircus
ENSLACG00000000806	-	98	58.445	ENSTSYG00000003406	SMG6	55	57.543	Carlito_syrichta
ENSLACG00000000806	-	98	52.898	ENSCAPG00000016197	SMG6	62	51.526	Cavia_aperea
ENSLACG00000000806	-	98	58.151	ENSCPOG00000014878	SMG6	55	56.053	Cavia_porcellus
ENSLACG00000000806	-	98	59.582	ENSCCAG00000035801	SMG6	55	59.287	Cebus_capucinus
ENSLACG00000000806	-	98	59.273	ENSCATG00000031956	SMG6	55	58.831	Cercocebus_atys
ENSLACG00000000806	-	98	59.975	ENSCLAG00000006748	SMG6	56	57.843	Chinchilla_lanigera
ENSLACG00000000806	-	98	59.295	ENSCSAG00000013800	SMG6	55	58.852	Chlorocebus_sabaeus
ENSLACG00000000806	-	99	56.888	ENSCPBG00000020369	SMG6	56	57.416	Chrysemys_picta_bellii
ENSLACG00000000806	-	98	59.024	ENSCANG00000031764	SMG6	57	59.024	Colobus_angolensis_palliatus
ENSLACG00000000806	-	94	57.033	ENSCGRG00001019595	Smg6	94	55.867	Cricetulus_griseus_chok1gshd
ENSLACG00000000806	-	98	57.650	ENSCGRG00000007782	Smg6	58	56.196	Cricetulus_griseus_crigri
ENSLACG00000000806	-	99	43.253	ENSDARG00000100481	smg6	59	42.710	Danio_rerio
ENSLACG00000000806	-	98	57.228	ENSDNOG00000048283	SMG6	55	57.403	Dasypus_novemcinctus
ENSLACG00000000806	-	90	100.000	ENSDORG00000016614	Smg6	53	100.000	Dipodomys_ordii
ENSLACG00000000806	-	98	59.141	ENSETEG00000016790	SMG6	55	57.543	Echinops_telfairi
ENSLACG00000000806	-	98	58.968	ENSEASG00005009318	SMG6	55	58.231	Equus_asinus_asinus
ENSLACG00000000806	-	99	58.333	ENSECAG00000006519	SMG6	56	57.609	Equus_caballus
ENSLACG00000000806	-	92	100.000	ENSEEUG00000003493	SMG6	52	100.000	Erinaceus_europaeus
ENSLACG00000000806	-	98	59.801	ENSFCAG00000028817	SMG6	55	58.685	Felis_catus
ENSLACG00000000806	-	98	56.448	ENSFALG00000006538	SMG6	56	56.777	Ficedula_albicollis
ENSLACG00000000806	-	98	58.343	ENSFDAG00000015106	SMG6	55	57.301	Fukomys_damarensis
ENSLACG00000000806	-	98	56.659	ENSGALG00000003108	SMG6	60	56.318	Gallus_gallus
ENSLACG00000000806	-	85	49.103	ENSGACG00000020521	smg6	52	48.418	Gasterosteus_aculeatus
ENSLACG00000000806	-	98	56.936	ENSGAGG00000025617	SMG6	57	57.195	Gopherus_agassizii
ENSLACG00000000806	-	98	59.466	ENSGGOG00000017156	SMG6	55	58.852	Gorilla_gorilla
ENSLACG00000000806	-	98	57.888	ENSHGLG00000012882	SMG6	55	56.174	Heterocephalus_glaber_female
ENSLACG00000000806	-	98	58.273	ENSHGLG00100017815	SMG6	56	56.538	Heterocephalus_glaber_male
ENSLACG00000000806	-	98	59.926	ENSSTOG00000028127	SMG6	55	57.646	Ictidomys_tridecemlineatus
ENSLACG00000000806	-	98	58.148	ENSJJAG00000015367	Smg6	65	56.479	Jaculus_jaculus
ENSLACG00000000806	-	58	62.551	ENSLOCG00000006448	smg6	55	47.468	Lepisosteus_oculatus
ENSLACG00000000806	-	98	58.974	ENSLAFG00000001261	SMG6	55	57.177	Loxodonta_africana
ENSLACG00000000806	-	98	59.417	ENSMFAG00000003394	SMG6	55	58.974	Macaca_fascicularis
ENSLACG00000000806	-	98	59.417	ENSMMUG00000023161	SMG6	55	58.974	Macaca_mulatta
ENSLACG00000000806	-	97	57.283	ENSMNEG00000044592	SMG6	56	57.373	Macaca_nemestrina
ENSLACG00000000806	-	98	59.345	ENSMLEG00000029353	SMG6	60	58.902	Mandrillus_leucophaeus
ENSLACG00000000806	-	98	55.795	ENSMGAG00000005401	-	75	55.596	Meleagris_gallopavo
ENSLACG00000000806	-	98	59.360	ENSMICG00000012913	SMG6	56	57.543	Microcebus_murinus
ENSLACG00000000806	-	98	57.914	ENSMODG00000010622	SMG6	55	57.160	Monodelphis_domestica
ENSLACG00000000806	-	98	59.433	MGP_CAROLIEiJ_G0016729	Smg6	77	83.212	Mus_caroli
ENSLACG00000000806	-	98	59.367	ENSMUSG00000038290	Smg6	77	83.273	Mus_musculus
ENSLACG00000000806	-	98	58.600	MGP_PahariEiJ_G0017866	Smg6	77	82.784	Mus_pahari
ENSLACG00000000806	-	98	58.996	MGP_SPRETEiJ_G0017572	Smg6	77	82.909	Mus_spretus
ENSLACG00000000806	-	98	59.727	ENSMPUG00000013046	SMG6	55	58.612	Mustela_putorius_furo
ENSLACG00000000806	-	98	59.852	ENSMLUG00000005739	SMG6	55	58.416	Myotis_lucifugus
ENSLACG00000000806	-	98	57.455	ENSNGAG00000007287	Smg6	67	57.528	Nannospalax_galili
ENSLACG00000000806	-	98	58.701	ENSNLEG00000017171	SMG6	56	58.456	Nomascus_leucogenys
ENSLACG00000000806	-	98	56.010	ENSMEUG00000015804	SMG6	56	54.926	Notamacropus_eugenii
ENSLACG00000000806	-	90	100.000	ENSODEG00000008038	SMG6	53	100.000	Octodon_degus
ENSLACG00000000806	-	97	44.832	ENSONIG00000005594	smg6	53	44.790	Oreochromis_niloticus
ENSLACG00000000806	-	98	58.946	ENSOCUG00000013018	SMG6	55	57.247	Oryctolagus_cuniculus
ENSLACG00000000806	-	98	58.931	ENSOGAG00000004483	SMG6	55	57.594	Otolemur_garnettii
ENSLACG00000000806	-	99	59.146	ENSOARG00000015076	SMG6	56	58.467	Ovis_aries
ENSLACG00000000806	-	98	59.606	ENSPPAG00000043296	SMG6	55	58.486	Pan_paniscus
ENSLACG00000000806	-	98	59.677	ENSPPRG00000014581	SMG6	55	58.561	Panthera_pardus
ENSLACG00000000806	-	98	59.776	ENSPTIG00000008925	SMG6	55	58.655	Panthera_tigris_altaica
ENSLACG00000000806	-	98	59.219	ENSPTRG00000008544	SMG6	55	58.608	Pan_troglodytes
ENSLACG00000000806	-	98	60.197	ENSPANG00000024588	SMG6	55	59.024	Papio_anubis
ENSLACG00000000806	-	98	57.613	ENSPSIG00000006660	SMG6	61	57.004	Pelodiscus_sinensis
ENSLACG00000000806	-	98	58.333	ENSPEMG00000020707	Smg6	55	56.543	Peromyscus_maniculatus_bairdii
ENSLACG00000000806	-	97	44.511	ENSPFOG00000012035	smg6	53	43.556	Poecilia_formosa
ENSLACG00000000806	-	98	57.196	ENSPPYG00000007790	SMG6	55	56.220	Pongo_abelii
ENSLACG00000000806	-	98	57.524	ENSPCAG00000000552	SMG6	56	56.379	Procavia_capensis
ENSLACG00000000806	-	98	58.242	ENSPCOG00000020925	SMG6	55	57.543	Propithecus_coquereli
ENSLACG00000000806	-	73	47.031	ENSPNAG00000015480	smg6	52	41.037	Pygocentrus_nattereri
ENSLACG00000000806	-	98	59.506	ENSRNOG00000003041	Smg6	77	83.212	Rattus_norvegicus
ENSLACG00000000806	-	98	60.417	ENSRBIG00000024746	SMG6	55	58.974	Rhinopithecus_bieti
ENSLACG00000000806	-	98	59.634	ENSRROG00000030423	SMG6	56	59.191	Rhinopithecus_roxellana
ENSLACG00000000806	-	98	58.974	ENSSBOG00000022518	SMG6	56	58.730	Saimiri_boliviensis_boliviensis
ENSLACG00000000806	-	98	59.582	ENSSHAG00000010045	SMG6	56	58.845	Sarcophilus_harrisii
ENSLACG00000000806	-	97	57.534	ENSSPUG00000007152	SMG6	55	56.413	Sphenodon_punctatus
ENSLACG00000000806	-	98	59.486	ENSSSCG00000017826	SMG6	59	58.231	Sus_scrofa
ENSLACG00000000806	-	98	55.514	ENSTGUG00000005836	SMG6	56	55.447	Taeniopygia_guttata
ENSLACG00000000806	-	98	58.017	ENSTBEG00000011424	SMG6	55	56.627	Tupaia_belangeri
ENSLACG00000000806	-	98	59.876	ENSUAMG00000025152	SMG6	56	58.758	Ursus_americanus
ENSLACG00000000806	-	98	59.752	ENSUMAG00000009306	SMG6	56	58.634	Ursus_maritimus
ENSLACG00000000806	-	88	71.500	ENSVPAG00000000225	SMG6	52	71.500	Vicugna_pacos
ENSLACG00000000806	-	98	58.714	ENSVVUG00000021727	SMG6	56	57.862	Vulpes_vulpes
ENSLACG00000000806	-	98	55.514	ENSXETG00000023799	SMG6	57	55.322	Xenopus_tropicalis
ENSLACG00000000806	-	99	42.397	ENSXCOG00000009867	smg6	54	40.526	Xiphophorus_couchianus
ENSLACG00000000806	-	97	42.536	ENSXMAG00000010321	smg6	51	41.453	Xiphophorus_maculatus