EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000000865 (Gene tree)
Gene ID: 102352181
Gene Symbol: APEX2
Alias: APE2|APEXL2|XTH2|ZGRF2
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 9732 bases
Position: chrJH128751.1:5950-15681
Accession: 102352181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000000968	Exo_endo_phos	PF03372.23	4.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000000977	APEX2-201	2083	XM_006010008	ENSLACP00000000968	532 (aa)	-	H2ZU97

Gene Model

Click here to download ENSLACG00000000865's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000865	APEX2	99	41.373	ENSG00000169188	APEX2	99	41.373	Homo_sapiens
ENSLACG00000000865	APEX2	100	50.000	ENSAPOG00000005805	apex2	100	50.341	Acanthochromis_polyacanthus
ENSLACG00000000865	APEX2	99	41.135	ENSAMEG00000003608	APEX2	99	41.135	Ailuropoda_melanoleuca
ENSLACG00000000865	APEX2	100	49.144	ENSACIG00000010000	apex2	100	49.829	Amphilophus_citrinellus
ENSLACG00000000865	APEX2	100	48.635	ENSAOCG00000021774	apex2	100	48.885	Amphiprion_ocellaris
ENSLACG00000000865	APEX2	100	48.635	ENSAPEG00000020890	apex2	94	49.400	Amphiprion_percula
ENSLACG00000000865	APEX2	100	47.098	ENSATEG00000023600	apex2	100	47.098	Anabas_testudineus
ENSLACG00000000865	APEX2	99	45.422	ENSACAG00000011201	APEX2	99	45.781	Anolis_carolinensis
ENSLACG00000000865	APEX2	99	42.707	ENSANAG00000021907	-	99	42.707	Aotus_nancymaae
ENSLACG00000000865	APEX2	97	36.630	ENSANAG00000020845	-	99	36.298	Aotus_nancymaae
ENSLACG00000000865	APEX2	100	50.438	ENSAMXG00000007422	apex2	100	51.418	Astyanax_mexicanus
ENSLACG00000000865	APEX2	99	41.250	ENSBTAG00000013177	APEX2	99	41.250	Bos_taurus
ENSLACG00000000865	APEX2	99	42.254	ENSCJAG00000016584	APEX2	99	42.254	Callithrix_jacchus
ENSLACG00000000865	APEX2	99	40.853	ENSCAFG00000014310	APEX2	99	40.853	Canis_familiaris
ENSLACG00000000865	APEX2	99	41.918	ENSCAFG00020013818	APEX2	99	41.918	Canis_lupus_dingo
ENSLACG00000000865	APEX2	99	41.786	ENSCHIG00000019916	APEX2	99	41.607	Capra_hircus
ENSLACG00000000865	APEX2	99	42.602	ENSTSYG00000005612	APEX2	99	42.602	Carlito_syrichta
ENSLACG00000000865	APEX2	99	39.068	ENSCPOG00000007265	APEX2	99	39.068	Cavia_porcellus
ENSLACG00000000865	APEX2	96	37.879	ENSCCAG00000025405	-	96	38.447	Cebus_capucinus
ENSLACG00000000865	APEX2	99	41.373	ENSCATG00000044854	APEX2	99	41.373	Cercocebus_atys
ENSLACG00000000865	APEX2	99	41.197	ENSCLAG00000017315	APEX2	99	41.197	Chinchilla_lanigera
ENSLACG00000000865	APEX2	99	42.152	ENSCSAG00000012124	APEX2	99	42.152	Chlorocebus_sabaeus
ENSLACG00000000865	APEX2	100	43.040	ENSCPBG00000016631	APEX2	99	43.407	Chrysemys_picta_bellii
ENSLACG00000000865	APEX2	99	41.621	ENSCSAVG00000006052	-	100	41.373	Ciona_savignyi
ENSLACG00000000865	APEX2	99	41.197	ENSCANG00000003053	APEX2	99	41.197	Colobus_angolensis_palliatus
ENSLACG00000000865	APEX2	99	42.580	ENSCGRG00001008132	Apex2	99	42.580	Cricetulus_griseus_chok1gshd
ENSLACG00000000865	APEX2	99	42.580	ENSCGRG00000009667	Apex2	99	42.580	Cricetulus_griseus_crigri
ENSLACG00000000865	APEX2	100	48.562	ENSCSEG00000019900	apex2	99	48.562	Cynoglossus_semilaevis
ENSLACG00000000865	APEX2	100	47.643	ENSCVAG00000021583	apex2	100	47.643	Cyprinodon_variegatus
ENSLACG00000000865	APEX2	100	50.791	ENSDARG00000008472	apex2	100	51.053	Danio_rerio
ENSLACG00000000865	APEX2	99	41.115	ENSDNOG00000038901	APEX2	99	41.115	Dasypus_novemcinctus
ENSLACG00000000865	APEX2	99	40.687	ENSEBUG00000015654	apex2	100	40.687	Eptatretus_burgeri
ENSLACG00000000865	APEX2	99	42.266	ENSEASG00005011694	APEX2	90	42.266	Equus_asinus_asinus
ENSLACG00000000865	APEX2	99	42.266	ENSECAG00000026921	APEX2	90	42.266	Equus_caballus
ENSLACG00000000865	APEX2	99	41.964	ENSEEUG00000013172	APEX2	99	41.964	Erinaceus_europaeus
ENSLACG00000000865	APEX2	100	48.259	ENSELUG00000021417	apex2	99	49.241	Esox_lucius
ENSLACG00000000865	APEX2	99	40.429	ENSFCAG00000021990	APEX2	99	40.429	Felis_catus
ENSLACG00000000865	APEX2	99	41.012	ENSFDAG00000008076	APEX2	99	41.012	Fukomys_damarensis
ENSLACG00000000865	APEX2	100	47.602	ENSFHEG00000021411	apex2	99	47.611	Fundulus_heteroclitus
ENSLACG00000000865	APEX2	71	51.832	ENSGMOG00000019681	apex2	99	52.632	Gadus_morhua
ENSLACG00000000865	APEX2	100	48.393	ENSGAFG00000005829	apex2	100	48.731	Gambusia_affinis
ENSLACG00000000865	APEX2	57	53.030	ENSGACG00000012307	apex2	94	51.309	Gasterosteus_aculeatus
ENSLACG00000000865	APEX2	76	44.104	ENSGAGG00000011520	APEX2	74	44.104	Gopherus_agassizii
ENSLACG00000000865	APEX2	99	41.343	ENSGGOG00000002056	APEX2	99	41.343	Gorilla_gorilla
ENSLACG00000000865	APEX2	100	53.028	ENSHBUG00000009938	apex2	100	53.394	Haplochromis_burtoni
ENSLACG00000000865	APEX2	99	41.084	ENSHGLG00000000273	APEX2	99	41.012	Heterocephalus_glaber_female
ENSLACG00000000865	APEX2	100	50.268	ENSHCOG00000010165	apex2	100	50.268	Hippocampus_comes
ENSLACG00000000865	APEX2	100	48.653	ENSIPUG00000000352	APEX2	100	48.649	Ictalurus_punctatus
ENSLACG00000000865	APEX2	99	41.799	ENSSTOG00000025121	APEX2	99	42.328	Ictidomys_tridecemlineatus
ENSLACG00000000865	APEX2	99	43.416	ENSJJAG00000019611	Apex2	99	43.416	Jaculus_jaculus
ENSLACG00000000865	APEX2	100	50.957	ENSKMAG00000006985	apex2	100	50.957	Kryptolebias_marmoratus
ENSLACG00000000865	APEX2	100	49.831	ENSLBEG00000012139	apex2	100	51.042	Labrus_bergylta
ENSLACG00000000865	APEX2	100	50.086	ENSLOCG00000014467	apex2	100	51.807	Lepisosteus_oculatus
ENSLACG00000000865	APEX2	99	40.603	ENSLAFG00000018312	APEX2	99	40.603	Loxodonta_africana
ENSLACG00000000865	APEX2	99	41.549	ENSMFAG00000002486	APEX2	99	41.549	Macaca_fascicularis
ENSLACG00000000865	APEX2	99	41.725	ENSMMUG00000008428	APEX2	99	41.725	Macaca_mulatta
ENSLACG00000000865	APEX2	99	41.652	ENSMNEG00000036783	APEX2	99	41.652	Macaca_nemestrina
ENSLACG00000000865	APEX2	99	41.373	ENSMLEG00000028208	APEX2	99	41.373	Mandrillus_leucophaeus
ENSLACG00000000865	APEX2	100	48.311	ENSMAMG00000024220	apex2	100	48.403	Mastacembelus_armatus
ENSLACG00000000865	APEX2	100	52.477	ENSMZEG00005026322	apex2	100	52.844	Maylandia_zebra
ENSLACG00000000865	APEX2	99	40.636	ENSMICG00000043181	APEX2	99	40.636	Microcebus_murinus
ENSLACG00000000865	APEX2	99	42.021	ENSMOCG00000004339	Apex2	99	42.021	Microtus_ochrogaster
ENSLACG00000000865	APEX2	100	47.973	ENSMMOG00000017340	apex2	100	49.829	Mola_mola
ENSLACG00000000865	APEX2	99	49.177	ENSMODG00000005341	APEX2	99	49.177	Monodelphis_domestica
ENSLACG00000000865	APEX2	100	47.386	ENSMALG00000014179	apex2	100	47.555	Monopterus_albus
ENSLACG00000000865	APEX2	50	31.783	MGP_CAROLIEiJ_G0019209	Apex1	81	31.783	Mus_caroli
ENSLACG00000000865	APEX2	99	43.363	MGP_CAROLIEiJ_G0033484	Apex2	99	43.363	Mus_caroli
ENSLACG00000000865	APEX2	99	43.816	ENSMUSG00000025269	Apex2	99	43.816	Mus_musculus
ENSLACG00000000865	APEX2	99	43.894	MGP_PahariEiJ_G0032023	Apex2	99	43.894	Mus_pahari
ENSLACG00000000865	APEX2	50	31.783	MGP_PahariEiJ_G0030232	Apex1	80	31.783	Mus_pahari
ENSLACG00000000865	APEX2	99	43.816	MGP_SPRETEiJ_G0034654	Apex2	99	43.816	Mus_spretus
ENSLACG00000000865	APEX2	99	41.324	ENSMPUG00000003293	APEX2	99	41.324	Mustela_putorius_furo
ENSLACG00000000865	APEX2	99	42.676	ENSMLUG00000004562	-	99	42.676	Myotis_lucifugus
ENSLACG00000000865	APEX2	99	41.756	ENSMLUG00000016298	-	99	41.756	Myotis_lucifugus
ENSLACG00000000865	APEX2	99	41.459	ENSNGAG00000013576	Apex2	99	41.459	Nannospalax_galili
ENSLACG00000000865	APEX2	100	50.342	ENSNBRG00000010099	apex2	100	50.685	Neolamprologus_brichardi
ENSLACG00000000865	APEX2	71	43.077	ENSNLEG00000032067	-	91	43.077	Nomascus_leucogenys
ENSLACG00000000865	APEX2	99	52.182	ENSONIG00000016881	apex2	99	52.182	Oreochromis_niloticus
ENSLACG00000000865	APEX2	93	51.931	ENSOANG00000000689	-	96	51.938	Ornithorhynchus_anatinus
ENSLACG00000000865	APEX2	99	34.806	ENSOCUG00000000570	APEX2	99	34.806	Oryctolagus_cuniculus
ENSLACG00000000865	APEX2	100	50.086	ENSORLG00000014053	apex2	100	50.086	Oryzias_latipes
ENSLACG00000000865	APEX2	100	50.868	ENSORLG00020013253	apex2	100	50.868	Oryzias_latipes_hni
ENSLACG00000000865	APEX2	100	49.743	ENSORLG00015007515	apex2	100	49.743	Oryzias_latipes_hsok
ENSLACG00000000865	APEX2	100	50.000	ENSOMEG00000003655	apex2	100	50.000	Oryzias_melastigma
ENSLACG00000000865	APEX2	99	42.281	ENSOGAG00000007797	APEX2	99	43.036	Otolemur_garnettii
ENSLACG00000000865	APEX2	99	41.786	ENSOARG00000005742	APEX2	99	41.607	Ovis_aries
ENSLACG00000000865	APEX2	99	41.373	ENSPPAG00000035747	APEX2	99	41.373	Pan_paniscus
ENSLACG00000000865	APEX2	99	39.714	ENSPPRG00000002440	APEX2	99	39.714	Panthera_pardus
ENSLACG00000000865	APEX2	99	39.535	ENSPTIG00000021651	APEX2	99	39.535	Panthera_tigris_altaica
ENSLACG00000000865	APEX2	99	41.549	ENSPTRG00000021946	APEX2	99	41.549	Pan_troglodytes
ENSLACG00000000865	APEX2	99	41.373	ENSPANG00000003595	APEX2	99	41.373	Papio_anubis
ENSLACG00000000865	APEX2	100	50.259	ENSPKIG00000007752	apex2	100	50.523	Paramormyrops_kingsleyae
ENSLACG00000000865	APEX2	100	51.323	ENSPMGG00000009151	apex2	100	50.615	Periophthalmus_magnuspinnatus
ENSLACG00000000865	APEX2	99	42.629	ENSPEMG00000016475	Apex2	99	42.629	Peromyscus_maniculatus_bairdii
ENSLACG00000000865	APEX2	99	49.541	ENSPCIG00000007633	APEX2	98	50.092	Phascolarctos_cinereus
ENSLACG00000000865	APEX2	100	48.562	ENSPFOG00000000408	apex2	100	49.069	Poecilia_formosa
ENSLACG00000000865	APEX2	100	48.731	ENSPLAG00000023814	apex2	100	48.731	Poecilia_latipinna
ENSLACG00000000865	APEX2	100	48.562	ENSPMEG00000023222	apex2	100	49.069	Poecilia_mexicana
ENSLACG00000000865	APEX2	99	41.667	ENSPPYG00000020388	APEX2	99	41.667	Pongo_abelii
ENSLACG00000000865	APEX2	99	41.637	ENSPCOG00000016083	APEX2	99	41.637	Propithecus_coquereli
ENSLACG00000000865	APEX2	92	40.864	ENSPVAG00000007851	APEX2	99	40.864	Pteropus_vampyrus
ENSLACG00000000865	APEX2	100	50.611	ENSPNYG00000015698	apex2	100	50.960	Pundamilia_nyererei
ENSLACG00000000865	APEX2	100	48.167	ENSPNAG00000011666	apex2	100	48.080	Pygocentrus_nattereri
ENSLACG00000000865	APEX2	99	43.262	ENSRNOG00000000166	Apex2	99	43.262	Rattus_norvegicus
ENSLACG00000000865	APEX2	99	42.832	ENSRBIG00000036500	APEX2	99	42.500	Rhinopithecus_bieti
ENSLACG00000000865	APEX2	99	41.404	ENSRROG00000032674	APEX2	99	41.404	Rhinopithecus_roxellana
ENSLACG00000000865	APEX2	95	37.864	ENSSBOG00000003489	-	95	37.864	Saimiri_boliviensis_boliviensis
ENSLACG00000000865	APEX2	99	42.199	ENSSBOG00000030500	-	99	42.707	Saimiri_boliviensis_boliviensis
ENSLACG00000000865	APEX2	99	50.091	ENSSHAG00000007846	APEX2	99	50.091	Sarcophilus_harrisii
ENSLACG00000000865	APEX2	100	53.832	ENSSFOG00015010354	apex2	100	53.707	Scleropages_formosus
ENSLACG00000000865	APEX2	100	49.567	ENSSMAG00000012753	apex2	100	49.567	Scophthalmus_maximus
ENSLACG00000000865	APEX2	100	49.306	ENSSDUG00000022892	apex2	100	49.479	Seriola_dumerili
ENSLACG00000000865	APEX2	100	50.542	ENSSLDG00000024347	apex2	100	50.722	Seriola_lalandi_dorsalis
ENSLACG00000000865	APEX2	99	43.009	ENSSARG00000010297	APEX2	99	43.009	Sorex_araneus
ENSLACG00000000865	APEX2	100	48.288	ENSSPAG00000016279	apex2	100	48.630	Stegastes_partitus
ENSLACG00000000865	APEX2	99	42.274	ENSSSCG00000012348	-	99	42.274	Sus_scrofa
ENSLACG00000000865	APEX2	100	48.722	ENSTRUG00000015660	apex2	100	49.914	Takifugu_rubripes
ENSLACG00000000865	APEX2	76	55.062	ENSTNIG00000003725	apex2	89	55.062	Tetraodon_nigroviridis
ENSLACG00000000865	APEX2	92	40.820	ENSTBEG00000010520	APEX2	99	40.820	Tupaia_belangeri
ENSLACG00000000865	APEX2	99	40.780	ENSUAMG00000004720	APEX2	99	40.925	Ursus_americanus
ENSLACG00000000865	APEX2	99	39.643	ENSUMAG00000002892	APEX2	99	40.214	Ursus_maritimus
ENSLACG00000000865	APEX2	99	41.563	ENSVVUG00000005989	APEX2	99	41.563	Vulpes_vulpes
ENSLACG00000000865	APEX2	99	51.866	ENSXETG00000022026	apex2	99	51.866	Xenopus_tropicalis
ENSLACG00000000865	APEX2	100	49.828	ENSXMAG00000025740	apex2	100	50.000	Xiphophorus_maculatus