EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000000946 (Gene tree)
Gene ID: 102366685
Gene Symbol: SF3B5
Alias: MGC3133|SF3b10|Ysf3
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 261 bases
Position: chrJH132885.1:7142-7402
Accession: 102366685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001057	SF3b10	PF07189.11	6.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001067	SF3B5-201	261	XM_006014093	ENSLACP00000001057	86 (aa)	XP_006014155	H2ZUI6

Gene Model

Click here to download ENSLACG00000000946's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000946	SF3B5	100	95.349	ENSG00000169976	SF3B5	100	95.349	Homo_sapiens
ENSLACG00000000946	SF3B5	100	90.698	ENSAPOG00000001721	sf3b5	100	90.698	Acanthochromis_polyacanthus
ENSLACG00000000946	SF3B5	100	91.860	ENSACIG00000008106	sf3b5	100	91.860	Amphilophus_citrinellus
ENSLACG00000000946	SF3B5	100	90.698	ENSAOCG00000023367	sf3b5	100	90.698	Amphiprion_ocellaris
ENSLACG00000000946	SF3B5	100	90.698	ENSAPEG00000004605	sf3b5	100	90.698	Amphiprion_percula
ENSLACG00000000946	SF3B5	100	91.860	ENSATEG00000009720	sf3b5	100	91.860	Anabas_testudineus
ENSLACG00000000946	SF3B5	100	94.186	ENSACAG00000007948	SF3B5	100	94.186	Anolis_carolinensis
ENSLACG00000000946	SF3B5	100	95.349	ENSANAG00000019999	SF3B5	100	95.349	Aotus_nancymaae
ENSLACG00000000946	SF3B5	100	91.860	ENSACLG00000022410	sf3b5	100	91.860	Astatotilapia_calliptera
ENSLACG00000000946	SF3B5	100	95.349	ENSBTAG00000009795	SF3B5	100	95.349	Bos_taurus
ENSLACG00000000946	SF3B5	100	95.349	ENSCJAG00000046566	SF3B5	100	95.349	Callithrix_jacchus
ENSLACG00000000946	SF3B5	100	95.349	ENSCAFG00000032495	SF3B5	100	95.349	Canis_familiaris
ENSLACG00000000946	SF3B5	100	95.349	ENSCAFG00020000873	SF3B5	100	95.349	Canis_lupus_dingo
ENSLACG00000000946	SF3B5	100	95.349	ENSCHIG00000007987	SF3B5	100	95.349	Capra_hircus
ENSLACG00000000946	SF3B5	100	95.349	ENSTSYG00000012236	SF3B5	100	95.349	Carlito_syrichta
ENSLACG00000000946	SF3B5	100	95.349	ENSCPOG00000012435	SF3B5	100	95.349	Cavia_porcellus
ENSLACG00000000946	SF3B5	100	95.349	ENSCCAG00000006528	SF3B5	100	95.349	Cebus_capucinus
ENSLACG00000000946	SF3B5	100	95.349	ENSCATG00000010192	SF3B5	100	95.349	Cercocebus_atys
ENSLACG00000000946	SF3B5	100	95.349	ENSCLAG00000017802	SF3B5	100	95.349	Chinchilla_lanigera
ENSLACG00000000946	SF3B5	100	95.349	ENSCSAG00000000187	SF3B5	100	95.349	Chlorocebus_sabaeus
ENSLACG00000000946	SF3B5	100	96.512	ENSCPBG00000017148	SF3B5	100	96.512	Chrysemys_picta_bellii
ENSLACG00000000946	SF3B5	97	74.699	ENSCING00000021953	-	97	74.699	Ciona_intestinalis
ENSLACG00000000946	SF3B5	100	95.349	ENSCANG00000002639	SF3B5	100	95.349	Colobus_angolensis_palliatus
ENSLACG00000000946	SF3B5	100	94.186	ENSCGRG00001007249	Sf3b5	100	94.186	Cricetulus_griseus_chok1gshd
ENSLACG00000000946	SF3B5	100	94.186	ENSCGRG00000019185	Sf3b5	100	94.186	Cricetulus_griseus_crigri
ENSLACG00000000946	SF3B5	100	93.023	ENSCSEG00000003216	sf3b5	100	93.023	Cynoglossus_semilaevis
ENSLACG00000000946	SF3B5	100	91.860	ENSCVAG00000005040	sf3b5	100	91.860	Cyprinodon_variegatus
ENSLACG00000000946	SF3B5	100	90.698	ENSDARG00000016855	sf3b5	100	90.698	Danio_rerio
ENSLACG00000000946	SF3B5	100	95.349	ENSDNOG00000048829	SF3B5	82	95.349	Dasypus_novemcinctus
ENSLACG00000000946	SF3B5	100	95.349	ENSDORG00000005838	Sf3b5	100	95.349	Dipodomys_ordii
ENSLACG00000000946	SF3B5	99	82.353	FBgn0040534	Sf3b5	100	82.353	Drosophila_melanogaster
ENSLACG00000000946	SF3B5	100	95.349	ENSETEG00000004047	SF3B5	100	95.349	Echinops_telfairi
ENSLACG00000000946	SF3B5	99	81.176	ENSEBUG00000002311	sf3b5	100	81.176	Eptatretus_burgeri
ENSLACG00000000946	SF3B5	100	95.349	ENSEASG00005009522	SF3B5	100	95.349	Equus_asinus_asinus
ENSLACG00000000946	SF3B5	100	95.349	ENSECAG00000005457	SF3B5	100	95.349	Equus_caballus
ENSLACG00000000946	SF3B5	100	91.860	ENSELUG00000014290	SF3B5	100	91.860	Esox_lucius
ENSLACG00000000946	SF3B5	100	95.349	ENSFCAG00000000936	SF3B5	100	95.349	Felis_catus
ENSLACG00000000946	SF3B5	100	93.023	ENSFALG00000015012	SF3B5	100	93.023	Ficedula_albicollis
ENSLACG00000000946	SF3B5	100	95.349	ENSFDAG00000003664	SF3B5	100	95.349	Fukomys_damarensis
ENSLACG00000000946	SF3B5	100	91.860	ENSFHEG00000020301	sf3b5	100	91.860	Fundulus_heteroclitus
ENSLACG00000000946	SF3B5	100	90.698	ENSGMOG00000019972	sf3b5	100	90.698	Gadus_morhua
ENSLACG00000000946	SF3B5	100	95.349	ENSGALG00000030824	SF3B5	100	95.349	Gallus_gallus
ENSLACG00000000946	SF3B5	100	91.860	ENSGAFG00000000271	sf3b5	100	91.860	Gambusia_affinis
ENSLACG00000000946	SF3B5	100	91.860	ENSGACG00000010363	sf3b5	100	91.860	Gasterosteus_aculeatus
ENSLACG00000000946	SF3B5	100	96.512	ENSGAGG00000011434	SF3B5	100	96.512	Gopherus_agassizii
ENSLACG00000000946	SF3B5	100	90.698	ENSGAGG00000000646	-	100	90.698	Gopherus_agassizii
ENSLACG00000000946	SF3B5	100	95.349	ENSGGOG00000001537	SF3B5	100	95.349	Gorilla_gorilla
ENSLACG00000000946	SF3B5	100	91.860	ENSHBUG00000008925	sf3b5	100	91.860	Haplochromis_burtoni
ENSLACG00000000946	SF3B5	100	95.349	ENSHGLG00000021406	SF3B5	100	95.349	Heterocephalus_glaber_female
ENSLACG00000000946	SF3B5	100	95.349	ENSHGLG00100020370	SF3B5	100	95.349	Heterocephalus_glaber_male
ENSLACG00000000946	SF3B5	100	90.698	ENSHCOG00000016806	sf3b5	100	90.698	Hippocampus_comes
ENSLACG00000000946	SF3B5	100	90.698	ENSHCOG00000016802	sf3b5	100	90.698	Hippocampus_comes
ENSLACG00000000946	SF3B5	100	90.698	ENSHCOG00000009115	-	100	90.698	Hippocampus_comes
ENSLACG00000000946	SF3B5	100	94.186	ENSIPUG00000015166	sf3b5	100	94.186	Ictalurus_punctatus
ENSLACG00000000946	SF3B5	100	95.349	ENSSTOG00000003347	SF3B5	100	95.349	Ictidomys_tridecemlineatus
ENSLACG00000000946	SF3B5	100	95.349	ENSJJAG00000001857	Sf3b5	100	95.349	Jaculus_jaculus
ENSLACG00000000946	SF3B5	100	91.860	ENSKMAG00000002249	sf3b5	100	91.860	Kryptolebias_marmoratus
ENSLACG00000000946	SF3B5	100	91.860	ENSLBEG00000019847	sf3b5	100	91.860	Labrus_bergylta
ENSLACG00000000946	SF3B5	100	93.023	ENSLOCG00000017352	sf3b5	100	93.023	Lepisosteus_oculatus
ENSLACG00000000946	SF3B5	100	95.349	ENSLAFG00000032489	SF3B5	100	95.349	Loxodonta_africana
ENSLACG00000000946	SF3B5	100	95.349	ENSMFAG00000029753	SF3B5	100	95.349	Macaca_fascicularis
ENSLACG00000000946	SF3B5	100	95.349	ENSMMUG00000047691	SF3B5	100	95.349	Macaca_mulatta
ENSLACG00000000946	SF3B5	100	95.349	ENSMNEG00000028236	SF3B5	100	95.349	Macaca_nemestrina
ENSLACG00000000946	SF3B5	100	95.349	ENSMLEG00000007622	SF3B5	100	95.349	Mandrillus_leucophaeus
ENSLACG00000000946	SF3B5	100	90.698	ENSMAMG00000021639	sf3b5	100	90.698	Mastacembelus_armatus
ENSLACG00000000946	SF3B5	100	91.860	ENSMZEG00005027408	sf3b5	100	91.860	Maylandia_zebra
ENSLACG00000000946	SF3B5	100	80.233	ENSMZEG00005027407	sf3b5	100	80.233	Maylandia_zebra
ENSLACG00000000946	SF3B5	100	91.860	ENSMZEG00005028115	SF3B5	100	91.860	Maylandia_zebra
ENSLACG00000000946	SF3B5	100	95.349	ENSMGAG00000015849	SF3B5	100	95.349	Meleagris_gallopavo
ENSLACG00000000946	SF3B5	100	94.186	ENSMAUG00000008283	Sf3b5	100	94.186	Mesocricetus_auratus
ENSLACG00000000946	SF3B5	100	95.349	ENSMICG00000014922	SF3B5	100	95.349	Microcebus_murinus
ENSLACG00000000946	SF3B5	100	94.186	ENSMOCG00000001713	Sf3b5	100	94.186	Microtus_ochrogaster
ENSLACG00000000946	SF3B5	100	90.698	ENSMMOG00000007956	sf3b5	100	90.698	Mola_mola
ENSLACG00000000946	SF3B5	100	95.349	ENSMODG00000023291	SF3B5	83	95.349	Monodelphis_domestica
ENSLACG00000000946	SF3B5	88	96.053	ENSMALG00000020357	sf3b5	93	96.053	Monopterus_albus
ENSLACG00000000946	SF3B5	100	94.186	MGP_CAROLIEiJ_G0015120	Sf3b5	100	94.186	Mus_caroli
ENSLACG00000000946	SF3B5	100	94.186	ENSMUSG00000078348	Sf3b5	100	94.186	Mus_musculus
ENSLACG00000000946	SF3B5	100	94.186	MGP_PahariEiJ_G0023739	Sf3b5	100	94.186	Mus_pahari
ENSLACG00000000946	SF3B5	100	94.186	MGP_SPRETEiJ_G0015928	Sf3b5	100	94.186	Mus_spretus
ENSLACG00000000946	SF3B5	100	95.349	ENSMPUG00000018379	SF3B5	100	95.349	Mustela_putorius_furo
ENSLACG00000000946	SF3B5	100	95.349	ENSMLUG00000028504	-	100	95.349	Myotis_lucifugus
ENSLACG00000000946	SF3B5	92	97.468	ENSMLUG00000025546	-	92	97.468	Myotis_lucifugus
ENSLACG00000000946	SF3B5	100	93.023	ENSMLUG00000010802	-	100	93.023	Myotis_lucifugus
ENSLACG00000000946	SF3B5	100	95.349	ENSNGAG00000010732	Sf3b5	100	95.349	Nannospalax_galili
ENSLACG00000000946	SF3B5	100	91.860	ENSNBRG00000014383	sf3b5	100	91.860	Neolamprologus_brichardi
ENSLACG00000000946	SF3B5	100	95.349	ENSNLEG00000019307	SF3B5	100	95.349	Nomascus_leucogenys
ENSLACG00000000946	SF3B5	100	95.349	ENSMEUG00000005445	-	100	95.349	Notamacropus_eugenii
ENSLACG00000000946	SF3B5	100	95.349	ENSMEUG00000005440	-	100	95.349	Notamacropus_eugenii
ENSLACG00000000946	SF3B5	100	94.186	ENSOPRG00000015107	SF3B5	100	94.186	Ochotona_princeps
ENSLACG00000000946	SF3B5	100	95.349	ENSODEG00000019507	SF3B5	100	95.349	Octodon_degus
ENSLACG00000000946	SF3B5	100	91.860	ENSONIG00000020725	sf3b5	100	91.860	Oreochromis_niloticus
ENSLACG00000000946	SF3B5	69	93.220	ENSOANG00000015301	SF3B5	97	93.220	Ornithorhynchus_anatinus
ENSLACG00000000946	SF3B5	100	95.349	ENSOCUG00000008752	SF3B5	100	95.349	Oryctolagus_cuniculus
ENSLACG00000000946	SF3B5	100	91.860	ENSORLG00000004925	sf3b5	100	91.860	Oryzias_latipes
ENSLACG00000000946	SF3B5	100	91.860	ENSORLG00020011625	sf3b5	100	91.860	Oryzias_latipes_hni
ENSLACG00000000946	SF3B5	100	91.860	ENSORLG00015017061	sf3b5	100	91.860	Oryzias_latipes_hsok
ENSLACG00000000946	SF3B5	100	91.860	ENSOMEG00000010620	sf3b5	100	91.860	Oryzias_melastigma
ENSLACG00000000946	SF3B5	100	95.349	ENSOGAG00000012152	SF3B5	100	95.349	Otolemur_garnettii
ENSLACG00000000946	SF3B5	92	94.937	ENSOARG00000019486	-	95	94.937	Ovis_aries
ENSLACG00000000946	SF3B5	100	91.860	ENSOARG00000002617	SF3B5	100	91.860	Ovis_aries
ENSLACG00000000946	SF3B5	100	95.349	ENSPPAG00000012940	SF3B5	100	95.349	Pan_paniscus
ENSLACG00000000946	SF3B5	100	95.349	ENSPPRG00000021262	SF3B5	100	95.349	Panthera_pardus
ENSLACG00000000946	SF3B5	100	95.349	ENSPTIG00000001952	SF3B5	100	95.349	Panthera_tigris_altaica
ENSLACG00000000946	SF3B5	100	95.349	ENSPTRG00000018676	SF3B5	100	95.349	Pan_troglodytes
ENSLACG00000000946	SF3B5	100	95.349	ENSPANG00000034242	SF3B5	100	95.349	Papio_anubis
ENSLACG00000000946	SF3B5	100	90.698	ENSPKIG00000006057	sf3b5	100	90.698	Paramormyrops_kingsleyae
ENSLACG00000000946	SF3B5	100	96.512	ENSPSIG00000001262	SF3B5	100	96.512	Pelodiscus_sinensis
ENSLACG00000000946	SF3B5	100	90.698	ENSPMGG00000014804	sf3b5	100	90.698	Periophthalmus_magnuspinnatus
ENSLACG00000000946	SF3B5	100	94.186	ENSPEMG00000012931	Sf3b5	100	94.186	Peromyscus_maniculatus_bairdii
ENSLACG00000000946	SF3B5	100	88.372	ENSPMAG00000010296	sf3b5	100	88.372	Petromyzon_marinus
ENSLACG00000000946	SF3B5	100	74.419	ENSPCIG00000025007	-	100	74.419	Phascolarctos_cinereus
ENSLACG00000000946	SF3B5	92	97.468	ENSPCIG00000011344	-	77	97.468	Phascolarctos_cinereus
ENSLACG00000000946	SF3B5	100	91.860	ENSPFOG00000019994	sf3b5	100	91.860	Poecilia_formosa
ENSLACG00000000946	SF3B5	100	91.860	ENSPLAG00000008412	sf3b5	100	91.860	Poecilia_latipinna
ENSLACG00000000946	SF3B5	100	91.860	ENSPMEG00000020050	sf3b5	100	91.860	Poecilia_mexicana
ENSLACG00000000946	SF3B5	100	91.860	ENSPREG00000009242	sf3b5	100	91.860	Poecilia_reticulata
ENSLACG00000000946	SF3B5	100	95.349	ENSPPYG00000017068	SF3B5	100	95.349	Pongo_abelii
ENSLACG00000000946	SF3B5	100	95.349	ENSPCAG00000009332	SF3B5	100	95.349	Procavia_capensis
ENSLACG00000000946	SF3B5	100	95.349	ENSPCOG00000013754	SF3B5	100	95.349	Propithecus_coquereli
ENSLACG00000000946	SF3B5	56	100.000	ENSPVAG00000002820	SF3B5	100	100.000	Pteropus_vampyrus
ENSLACG00000000946	SF3B5	100	91.860	ENSPNYG00000002075	sf3b5	100	91.860	Pundamilia_nyererei
ENSLACG00000000946	SF3B5	100	93.023	ENSPNAG00000004942	sf3b5	100	93.023	Pygocentrus_nattereri
ENSLACG00000000946	SF3B5	100	94.186	ENSRNOG00000014908	Sf3b5	100	94.186	Rattus_norvegicus
ENSLACG00000000946	SF3B5	100	95.349	ENSRBIG00000006301	SF3B5	100	95.349	Rhinopithecus_bieti
ENSLACG00000000946	SF3B5	100	95.349	ENSRROG00000037067	SF3B5	100	95.349	Rhinopithecus_roxellana
ENSLACG00000000946	SF3B5	100	95.349	ENSSBOG00000006122	SF3B5	100	95.349	Saimiri_boliviensis_boliviensis
ENSLACG00000000946	SF3B5	100	94.186	ENSSHAG00000015670	SF3B5	100	94.186	Sarcophilus_harrisii
ENSLACG00000000946	SF3B5	100	90.698	ENSSFOG00015015767	sf3b5	100	90.698	Scleropages_formosus
ENSLACG00000000946	SF3B5	100	91.860	ENSSMAG00000018852	sf3b5	100	91.860	Scophthalmus_maximus
ENSLACG00000000946	SF3B5	100	91.860	ENSSDUG00000018161	sf3b5	100	91.860	Seriola_dumerili
ENSLACG00000000946	SF3B5	100	91.860	ENSSLDG00000014547	sf3b5	100	91.860	Seriola_lalandi_dorsalis
ENSLACG00000000946	SF3B5	100	95.349	ENSSARG00000007820	SF3B5	100	95.349	Sorex_araneus
ENSLACG00000000946	SF3B5	100	90.698	ENSSPAG00000017371	-	100	90.698	Stegastes_partitus
ENSLACG00000000946	SF3B5	100	90.698	ENSSPAG00000009244	sf3b5	100	90.698	Stegastes_partitus
ENSLACG00000000946	SF3B5	100	95.349	ENSSSCG00000035578	SF3B5	100	95.349	Sus_scrofa
ENSLACG00000000946	SF3B5	100	95.349	ENSTGUG00000010810	SF3B5	100	95.349	Taeniopygia_guttata
ENSLACG00000000946	SF3B5	100	93.023	ENSTRUG00000005577	sf3b5	100	93.023	Takifugu_rubripes
ENSLACG00000000946	SF3B5	100	93.023	ENSTNIG00000001265	sf3b5	100	93.023	Tetraodon_nigroviridis
ENSLACG00000000946	SF3B5	100	94.186	ENSTBEG00000003072	SF3B5	100	94.186	Tupaia_belangeri
ENSLACG00000000946	SF3B5	100	95.349	ENSTTRG00000008817	SF3B5	100	95.349	Tursiops_truncatus
ENSLACG00000000946	SF3B5	100	95.349	ENSUAMG00000027296	SF3B5	100	95.349	Ursus_americanus
ENSLACG00000000946	SF3B5	100	95.349	ENSUMAG00000005448	SF3B5	100	95.349	Ursus_maritimus
ENSLACG00000000946	SF3B5	100	95.349	ENSVPAG00000003826	SF3B5	100	95.349	Vicugna_pacos
ENSLACG00000000946	SF3B5	100	95.349	ENSVVUG00000004703	SF3B5	100	95.349	Vulpes_vulpes
ENSLACG00000000946	SF3B5	100	95.349	ENSXETG00000021409	sf3b5	100	95.349	Xenopus_tropicalis
ENSLACG00000000946	SF3B5	100	91.860	ENSXMAG00000019971	sf3b5	100	91.860	Xiphophorus_maculatus