EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000000981 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1046 bases
Position: chrJH129659.1:7885-8930
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001097	RVT_1	PF00078.27	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001107	-	663	-	ENSLACP00000001097	220 (aa)	-	H2ZUM6

Gene Model

Click here to download ENSLACG00000000981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000000981's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000000981	-	88	30.769	ENSLACG00000010373	-	76	30.769
ENSLACG00000000981	-	91	50.249	ENSLACG00000004732	-	60	50.249
ENSLACG00000000981	-	56	30.894	ENSLACG00000016284	-	64	30.894
ENSLACG00000000981	-	61	31.884	ENSLACG00000014604	-	72	31.884
ENSLACG00000000981	-	85	41.885	ENSLACG00000000714	-	87	44.118
ENSLACG00000000981	-	72	34.706	ENSLACG00000005904	-	58	34.706
ENSLACG00000000981	-	81	44.134	ENSLACG00000000029	-	50	44.134

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000000981	-	88	30.457	ENSACLG00000021935	-	60	30.457	Astatotilapia_calliptera
ENSLACG00000000981	-	73	30.675	ENSACLG00000010403	-	52	30.675	Astatotilapia_calliptera
ENSLACG00000000981	-	74	36.364	ENSCPBG00000001687	-	55	36.364	Chrysemys_picta_bellii
ENSLACG00000000981	-	74	35.758	ENSGAGG00000022131	-	55	35.758	Gopherus_agassizii
ENSLACG00000000981	-	74	30.488	ENSGAGG00000022000	-	58	30.488	Gopherus_agassizii
ENSLACG00000000981	-	91	30.500	ENSHBUG00000009088	-	54	30.500	Haplochromis_burtoni
ENSLACG00000000981	-	81	30.244	ENSKMAG00000010799	-	57	30.244	Kryptolebias_marmoratus
ENSLACG00000000981	-	74	30.864	ENSMALG00000020245	-	59	30.864	Monopterus_albus
ENSLACG00000000981	-	86	30.526	ENSNBRG00000002477	-	55	30.526	Neolamprologus_brichardi
ENSLACG00000000981	-	90	30.151	ENSNBRG00000002791	-	64	30.151	Neolamprologus_brichardi
ENSLACG00000000981	-	90	30.653	ENSORLG00000022411	-	55	30.653	Oryzias_latipes
ENSLACG00000000981	-	90	34.673	ENSORLG00020016252	-	52	34.673	Oryzias_latipes_hni
ENSLACG00000000981	-	98	30.698	ENSORLG00020000154	-	51	30.698	Oryzias_latipes_hni
ENSLACG00000000981	-	90	33.838	ENSORLG00020021288	-	61	33.838	Oryzias_latipes_hni
ENSLACG00000000981	-	98	30.233	ENSORLG00020012706	-	53	30.233	Oryzias_latipes_hni
ENSLACG00000000981	-	74	36.810	ENSORLG00020002705	-	52	36.810	Oryzias_latipes_hni
ENSLACG00000000981	-	90	33.668	ENSORLG00015021822	-	52	33.668	Oryzias_latipes_hsok
ENSLACG00000000981	-	74	31.902	ENSOMEG00000007764	-	55	31.902	Oryzias_melastigma
ENSLACG00000000981	-	98	34.101	ENSPSIG00000001757	-	52	34.101	Pelodiscus_sinensis
ENSLACG00000000981	-	98	32.569	ENSPSIG00000001197	-	52	32.569	Pelodiscus_sinensis
ENSLACG00000000981	-	73	32.298	ENSPSIG00000002033	-	50	32.298	Pelodiscus_sinensis
ENSLACG00000000981	-	91	31.343	ENSPSIG00000000007	-	50	31.343	Pelodiscus_sinensis
ENSLACG00000000981	-	98	36.406	ENSPSIG00000014032	-	62	36.406	Pelodiscus_sinensis
ENSLACG00000000981	-	88	34.184	ENSPSIG00000001816	-	73	34.184	Pelodiscus_sinensis
ENSLACG00000000981	-	70	35.032	ENSPSIG00000001531	-	83	35.032	Pelodiscus_sinensis
ENSLACG00000000981	-	88	32.124	ENSPNYG00000004598	-	64	32.124	Pundamilia_nyererei
ENSLACG00000000981	-	88	30.570	ENSSFOG00015015399	-	55	30.570	Scleropages_formosus
ENSLACG00000000981	-	91	35.266	ENSTGUG00000018474	-	88	35.266	Taeniopygia_guttata
ENSLACG00000000981	-	88	34.184	ENSTGUG00000018372	-	85	34.184	Taeniopygia_guttata
ENSLACG00000000981	-	88	34.184	ENSTGUG00000018469	-	85	34.184	Taeniopygia_guttata
ENSLACG00000000981	-	90	33.500	ENSTGUG00000018141	-	81	33.500	Taeniopygia_guttata
ENSLACG00000000981	-	86	32.474	ENSTRUG00000024970	-	62	32.474	Takifugu_rubripes