EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000001018 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 26063 bases
Position: chrJH127745.1:8616-34678
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001137	PARP	PF00644.20	5.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001148	-	1806	-	ENSLACP00000001137	601 (aa)	-	H2ZUR6

Gene Model

Click here to download ENSLACG00000001018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000001018	-	58	32.821	ENSLACG00000012572	PARP9	63	32.821
ENSLACG00000001018	-	53	39.450	ENSLACG00000008565	-	99	39.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001018	-	52	49.505	ENSAPOG00000021642	-	65	49.505	Acanthochromis_polyacanthus
ENSLACG00000001018	-	99	35.158	ENSACIG00000003944	si:ch211-219a4.3	83	49.756	Amphilophus_citrinellus
ENSLACG00000001018	-	99	32.226	ENSACIG00000004252	si:ch211-219a4.3	99	30.920	Amphilophus_citrinellus
ENSLACG00000001018	-	99	32.724	ENSACIG00000004115	si:ch211-219a4.3	97	30.723	Amphilophus_citrinellus
ENSLACG00000001018	-	52	49.749	ENSACIG00000009912	-	99	49.749	Amphilophus_citrinellus
ENSLACG00000001018	-	54	49.490	ENSAOCG00000017389	-	56	49.490	Amphiprion_ocellaris
ENSLACG00000001018	-	99	34.609	ENSAPEG00000001687	-	65	49.490	Amphiprion_percula
ENSLACG00000001018	-	99	32.066	ENSAPEG00000003728	-	99	32.290	Amphiprion_percula
ENSLACG00000001018	-	99	31.940	ENSAPEG00000003700	-	78	31.940	Amphiprion_percula
ENSLACG00000001018	-	99	34.328	ENSATEG00000002598	-	96	34.328	Anabas_testudineus
ENSLACG00000001018	-	99	33.777	ENSATEG00000002592	-	63	33.777	Anabas_testudineus
ENSLACG00000001018	-	100	33.993	ENSATEG00000002587	-	67	33.993	Anabas_testudineus
ENSLACG00000001018	-	99	36.738	ENSAPLG00000010410	-	54	37.397	Anas_platyrhynchos
ENSLACG00000001018	-	100	34.641	ENSACAG00000009769	-	52	34.641	Anolis_carolinensis
ENSLACG00000001018	-	83	34.661	ENSACAG00000009741	-	99	34.524	Anolis_carolinensis
ENSLACG00000001018	-	99	35.008	ENSACLG00000001129	-	57	52.258	Astatotilapia_calliptera
ENSLACG00000001018	-	64	33.505	ENSACLG00000013204	-	51	34.021	Astatotilapia_calliptera
ENSLACG00000001018	-	100	35.073	ENSACLG00000013116	-	97	35.390	Astatotilapia_calliptera
ENSLACG00000001018	-	85	47.475	ENSACLG00000005418	-	92	47.938	Astatotilapia_calliptera
ENSLACG00000001018	-	99	34.590	ENSAMXG00000031852	-	85	34.590	Astyanax_mexicanus
ENSLACG00000001018	-	99	31.856	ENSAMXG00000043329	-	86	31.856	Astyanax_mexicanus
ENSLACG00000001018	-	100	32.945	ENSCPOG00000020020	PARP14	53	32.945	Cavia_porcellus
ENSLACG00000001018	-	99	34.539	ENSCPBG00000013912	-	51	34.539	Chrysemys_picta_bellii
ENSLACG00000001018	-	99	34.106	ENSCSEG00000017936	si:ch211-219a4.3	84	46.970	Cynoglossus_semilaevis
ENSLACG00000001018	-	60	43.210	ENSCSEG00000020071	-	90	43.210	Cynoglossus_semilaevis
ENSLACG00000001018	-	51	50.251	ENSCVAG00000014329	-	96	50.251	Cyprinodon_variegatus
ENSLACG00000001018	-	99	36.143	ENSDARG00000040445	si:ch211-219a4.3	99	35.472	Danio_rerio
ENSLACG00000001018	-	100	35.679	ENSDARG00000099377	si:cabz01030277.1	100	35.679	Danio_rerio
ENSLACG00000001018	-	91	33.874	ENSDARG00000105415	si:ch211-163c2.1	100	35.150	Danio_rerio
ENSLACG00000001018	-	100	35.050	ENSDORG00000000690	Parp14	53	35.050	Dipodomys_ordii
ENSLACG00000001018	-	99	33.755	ENSETEG00000002790	PARP14	52	33.755	Echinops_telfairi
ENSLACG00000001018	-	58	45.500	ENSEBUG00000002611	-	54	45.500	Eptatretus_burgeri
ENSLACG00000001018	-	53	45.349	ENSEBUG00000000526	-	51	45.349	Eptatretus_burgeri
ENSLACG00000001018	-	99	33.884	ENSFALG00000013545	-	56	33.884	Ficedula_albicollis
ENSLACG00000001018	-	99	36.201	ENSFHEG00000008557	-	99	35.714	Fundulus_heteroclitus
ENSLACG00000001018	-	100	43.200	ENSGMOG00000011231	-	98	42.927	Gadus_morhua
ENSLACG00000001018	-	99	35.420	ENSGALG00000012072	-	51	35.420	Gallus_gallus
ENSLACG00000001018	-	99	34.590	ENSGAFG00000009879	si:ch211-219a4.3	99	33.205	Gambusia_affinis
ENSLACG00000001018	-	99	36.026	ENSGAFG00000001814	-	52	49.490	Gambusia_affinis
ENSLACG00000001018	-	60	50.510	ENSGAFG00000001802	-	89	40.892	Gambusia_affinis
ENSLACG00000001018	-	51	49.749	ENSGAFG00000002533	-	96	49.749	Gambusia_affinis
ENSLACG00000001018	-	99	35.372	ENSGACG00000002353	si:ch211-219a4.3	63	45.217	Gasterosteus_aculeatus
ENSLACG00000001018	-	99	35.953	ENSGACG00000018943	-	70	35.953	Gasterosteus_aculeatus
ENSLACG00000001018	-	84	31.262	ENSGAGG00000017725	-	51	31.262	Gopherus_agassizii
ENSLACG00000001018	-	100	35.961	ENSGAGG00000000808	-	58	35.961	Gopherus_agassizii
ENSLACG00000001018	-	52	50.505	ENSHBUG00000005369	-	88	50.505	Haplochromis_burtoni
ENSLACG00000001018	-	81	32.186	ENSHBUG00000005337	-	97	32.186	Haplochromis_burtoni
ENSLACG00000001018	-	99	34.846	ENSHBUG00000018235	-	64	49.754	Haplochromis_burtoni
ENSLACG00000001018	-	99	34.697	ENSIPUG00000003936	si:ch211-219a4.3	55	34.697	Ictalurus_punctatus
ENSLACG00000001018	-	99	36.026	ENSKMAG00000016827	-	57	47.489	Kryptolebias_marmoratus
ENSLACG00000001018	-	52	53.552	ENSKMAG00000003908	-	99	53.552	Kryptolebias_marmoratus
ENSLACG00000001018	-	52	54.098	ENSKMAG00000012870	-	92	54.098	Kryptolebias_marmoratus
ENSLACG00000001018	-	99	34.158	ENSLBEG00000016023	-	80	34.158	Labrus_bergylta
ENSLACG00000001018	-	99	37.829	ENSLOCG00000003463	-	50	37.829	Lepisosteus_oculatus
ENSLACG00000001018	-	100	35.479	ENSLOCG00000000239	si:cabz01030277.1	70	35.479	Lepisosteus_oculatus
ENSLACG00000001018	-	100	31.901	ENSMAMG00000014821	si:cabz01030277.1	54	32.066	Mastacembelus_armatus
ENSLACG00000001018	-	99	35.658	ENSMAMG00000012368	-	56	36.450	Mastacembelus_armatus
ENSLACG00000001018	-	99	34.158	ENSMZEG00005025678	si:ch211-219a4.3	89	49.749	Maylandia_zebra
ENSLACG00000001018	-	51	47.980	ENSMZEG00005026601	-	88	47.980	Maylandia_zebra
ENSLACG00000001018	-	54	53.548	ENSMZEG00005025708	-	50	53.548	Maylandia_zebra
ENSLACG00000001018	-	100	35.574	ENSMGAG00000012246	-	54	35.574	Meleagris_gallopavo
ENSLACG00000001018	-	85	35.521	ENSMGAG00000016901	-	99	35.521	Meleagris_gallopavo
ENSLACG00000001018	-	99	34.385	ENSMMOG00000005282	-	94	34.385	Mola_mola
ENSLACG00000001018	-	99	33.111	ENSMMOG00000005277	-	95	33.111	Mola_mola
ENSLACG00000001018	-	52	37.342	ENSMODG00000007157	-	97	37.342	Monodelphis_domestica
ENSLACG00000001018	-	81	33.947	ENSMALG00000015864	-	99	33.947	Monopterus_albus
ENSLACG00000001018	-	100	32.358	ENSMALG00000015837	-	50	32.787	Monopterus_albus
ENSLACG00000001018	-	75	34.152	ENSMLUG00000027718	-	99	34.152	Myotis_lucifugus
ENSLACG00000001018	-	100	34.276	ENSMLUG00000022755	-	59	34.276	Myotis_lucifugus
ENSLACG00000001018	-	52	49.261	ENSNBRG00000005232	-	64	49.261	Neolamprologus_brichardi
ENSLACG00000001018	-	65	47.297	ENSONIG00000004517	-	64	47.297	Oreochromis_niloticus
ENSLACG00000001018	-	99	34.528	ENSONIG00000007870	-	99	34.510	Oreochromis_niloticus
ENSLACG00000001018	-	99	33.659	ENSONIG00000012986	-	83	33.929	Oreochromis_niloticus
ENSLACG00000001018	-	64	34.884	ENSORLG00000026291	-	60	34.884	Oryzias_latipes
ENSLACG00000001018	-	99	35.927	ENSORLG00000007845	-	88	35.927	Oryzias_latipes
ENSLACG00000001018	-	99	33.719	ENSORLG00000008781	-	89	33.993	Oryzias_latipes
ENSLACG00000001018	-	64	35.309	ENSORLG00020005917	-	60	35.309	Oryzias_latipes_hni
ENSLACG00000001018	-	99	33.554	ENSORLG00015021971	si:ch211-219a4.3	89	46.465	Oryzias_latipes_hsok
ENSLACG00000001018	-	52	49.246	ENSOMEG00000016395	-	97	49.246	Oryzias_melastigma
ENSLACG00000001018	-	99	32.348	ENSOMEG00000019715	si:ch211-219a4.3	90	46.569	Oryzias_melastigma
ENSLACG00000001018	-	52	48.744	ENSOMEG00000016380	-	88	48.744	Oryzias_melastigma
ENSLACG00000001018	-	99	34.534	ENSOMEG00000022143	-	91	34.534	Oryzias_melastigma
ENSLACG00000001018	-	100	35.821	ENSPTRG00000015297	PARP14	50	35.821	Pan_troglodytes
ENSLACG00000001018	-	58	37.607	ENSPKIG00000004135	-	97	37.607	Paramormyrops_kingsleyae
ENSLACG00000001018	-	99	37.129	ENSPKIG00000004027	-	89	37.129	Paramormyrops_kingsleyae
ENSLACG00000001018	-	100	35.025	ENSPSIG00000003516	PARP14	54	35.025	Pelodiscus_sinensis
ENSLACG00000001018	-	84	35.478	ENSPMGG00000007159	-	99	35.478	Periophthalmus_magnuspinnatus
ENSLACG00000001018	-	94	34.635	ENSPMGG00000004482	-	84	47.959	Periophthalmus_magnuspinnatus
ENSLACG00000001018	-	100	33.937	ENSPEMG00000008286	Parp14	53	33.937	Peromyscus_maniculatus_bairdii
ENSLACG00000001018	-	100	32.683	ENSPMAG00000009649	-	84	32.683	Petromyzon_marinus
ENSLACG00000001018	-	99	33.133	ENSPMAG00000008296	-	98	33.133	Petromyzon_marinus
ENSLACG00000001018	-	88	50.279	ENSPFOG00000016743	si:ch211-219a4.3	71	50.279	Poecilia_formosa
ENSLACG00000001018	-	65	35.385	ENSPFOG00000024351	-	81	35.385	Poecilia_formosa
ENSLACG00000001018	-	71	41.111	ENSPFOG00000023812	-	61	41.111	Poecilia_formosa
ENSLACG00000001018	-	64	34.704	ENSPFOG00000021893	-	99	34.704	Poecilia_formosa
ENSLACG00000001018	-	99	37.134	ENSPFOG00000000012	-	84	37.134	Poecilia_formosa
ENSLACG00000001018	-	99	33.333	ENSPFOG00000005470	-	93	34.177	Poecilia_formosa
ENSLACG00000001018	-	65	34.615	ENSPLAG00000004367	-	55	34.615	Poecilia_latipinna
ENSLACG00000001018	-	90	34.182	ENSPMEG00000012524	-	95	34.545	Poecilia_mexicana
ENSLACG00000001018	-	65	34.872	ENSPMEG00000012541	-	55	34.872	Poecilia_mexicana
ENSLACG00000001018	-	99	36.921	ENSPREG00000007508	-	51	49.724	Poecilia_reticulata
ENSLACG00000001018	-	99	34.050	ENSPREG00000019242	-	97	33.202	Poecilia_reticulata
ENSLACG00000001018	-	51	50.251	ENSPREG00000003560	-	95	50.251	Poecilia_reticulata
ENSLACG00000001018	-	69	35.185	ENSPREG00000003531	-	57	35.185	Poecilia_reticulata
ENSLACG00000001018	-	52	49.746	ENSPREG00000007470	-	98	49.746	Poecilia_reticulata
ENSLACG00000001018	-	100	35.821	ENSPPYG00000013479	PARP14	52	35.821	Pongo_abelii
ENSLACG00000001018	-	99	34.158	ENSPNYG00000013937	-	89	49.246	Pundamilia_nyererei
ENSLACG00000001018	-	54	54.194	ENSPNYG00000001714	-	84	51.136	Pundamilia_nyererei
ENSLACG00000001018	-	51	47.980	ENSPNYG00000021378	-	88	47.980	Pundamilia_nyererei
ENSLACG00000001018	-	87	33.898	ENSPNAG00000020642	-	100	33.898	Pygocentrus_nattereri
ENSLACG00000001018	-	99	35.585	ENSPNAG00000028188	si:ch211-219a4.3	50	35.585	Pygocentrus_nattereri
ENSLACG00000001018	-	99	33.660	ENSSHAG00000002478	PARP14	53	33.660	Sarcophilus_harrisii
ENSLACG00000001018	-	88	34.888	ENSSFOG00015012771	-	93	34.888	Scleropages_formosus
ENSLACG00000001018	-	51	51.777	ENSSFOG00015012828	-	79	51.777	Scleropages_formosus
ENSLACG00000001018	-	99	35.025	ENSSFOG00015001605	-	94	44.840	Scleropages_formosus
ENSLACG00000001018	-	78	50.980	ENSSMAG00000007826	-	88	50.980	Scophthalmus_maximus
ENSLACG00000001018	-	100	33.549	ENSSDUG00000007576	-	100	33.549	Seriola_dumerili
ENSLACG00000001018	-	99	35.612	ENSSDUG00000001575	-	78	48.804	Seriola_dumerili
ENSLACG00000001018	-	99	34.804	ENSSDUG00000009289	si:ch211-219a4.3	51	34.804	Seriola_dumerili
ENSLACG00000001018	-	61	35.772	ENSSLDG00000005960	-	99	35.772	Seriola_lalandi_dorsalis
ENSLACG00000001018	-	99	35.680	ENSSLDG00000005702	-	56	50.000	Seriola_lalandi_dorsalis
ENSLACG00000001018	-	99	34.215	ENSSPUG00000016301	-	58	34.215	Sphenodon_punctatus
ENSLACG00000001018	-	99	33.654	ENSSPUG00000016288	-	54	33.654	Sphenodon_punctatus
ENSLACG00000001018	-	99	33.222	ENSSPAG00000004771	-	62	33.167	Stegastes_partitus
ENSLACG00000001018	-	99	33.887	ENSTRUG00000004579	-	89	46.970	Takifugu_rubripes
ENSLACG00000001018	-	74	32.135	ENSTRUG00000004556	-	100	32.135	Takifugu_rubripes
ENSLACG00000001018	-	62	39.442	ENSTNIG00000008883	-	62	39.442	Tetraodon_nigroviridis
ENSLACG00000001018	-	52	49.490	ENSUAMG00000004120	-	80	49.490	Ursus_americanus
ENSLACG00000001018	-	89	32.787	ENSXETG00000010161	parp14.3	90	42.336	Xenopus_tropicalis
ENSLACG00000001018	-	56	39.444	ENSXETG00000031130	-	93	39.444	Xenopus_tropicalis
ENSLACG00000001018	-	99	34.590	ENSXCOG00000014707	-	88	47.475	Xiphophorus_couchianus
ENSLACG00000001018	-	66	34.739	ENSXMAG00000027110	-	57	34.739	Xiphophorus_maculatus
ENSLACG00000001018	-	71	41.111	ENSXMAG00000024189	-	61	41.111	Xiphophorus_maculatus
ENSLACG00000001018	-	99	34.488	ENSXMAG00000001866	-	96	34.983	Xiphophorus_maculatus