EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000001026 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 927 bases
Position: chrJH132473.1:8767-9693
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001145	RVT_1	PF00078.27	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001156	-	912	-	ENSLACP00000001145	304 (aa)	-	H2ZUS4

Gene Model

Click here to download ENSLACG00000001026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000001026	-	71	33.028	ENSLACG00000005704	-	79	33.028
ENSLACG00000001026	-	62	96.809	ENSLACG00000015779	-	100	96.809
ENSLACG00000001026	-	53	92.857	ENSLACG00000002615	-	66	92.857
ENSLACG00000001026	-	58	33.152	ENSLACG00000010360	-	56	33.152

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001026	-	73	45.291	ENSEBUG00000004499	-	83	45.291	Eptatretus_burgeri
ENSLACG00000001026	-	96	47.000	ENSEBUG00000002536	-	77	47.419	Eptatretus_burgeri
ENSLACG00000001026	-	89	42.647	ENSLOCG00000017839	-	88	42.647	Lepisosteus_oculatus
ENSLACG00000001026	-	78	47.458	ENSLOCG00000017287	-	61	47.458	Lepisosteus_oculatus
ENSLACG00000001026	-	89	37.226	ENSLOCG00000015915	-	87	37.226	Lepisosteus_oculatus
ENSLACG00000001026	-	93	38.926	ENSLOCG00000016625	-	78	38.926	Lepisosteus_oculatus
ENSLACG00000001026	-	53	40.606	ENSLOCG00000007332	-	65	40.244	Lepisosteus_oculatus
ENSLACG00000001026	-	54	39.535	ENSNBRG00000019184	-	85	39.535	Neolamprologus_brichardi
ENSLACG00000001026	-	99	48.377	ENSPFOG00000006063	-	99	48.377	Poecilia_formosa