EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000001089 (Gene tree)
Gene ID: -
Gene Symbol: SRRT
Alias: ARS2|Asr2|serrate
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 36103 bases
Position: chrJH127792.1:9712-45814
Accession: 102357998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001215	ARS2	PF04959.13	1.2e-52	1	2
ENSLACP00000001215	ARS2	PF04959.13	1.2e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001226	SRRT-201	2929	XM_006005690	ENSLACP00000001215	832 (aa)	-	H2ZUZ4

Gene Model

Click here to download ENSLACG00000001089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001089	SRRT	96	65.489	ENSG00000087087	SRRT	98	83.871	Homo_sapiens
ENSLACG00000001089	SRRT	53	58.134	ENSAPOG00000002304	srrt	95	55.072	Acanthochromis_polyacanthus
ENSLACG00000001089	SRRT	96	62.301	ENSAMEG00000014506	SRRT	95	63.158	Ailuropoda_melanoleuca
ENSLACG00000001089	SRRT	95	57.143	ENSACIG00000015795	srrt	95	55.879	Amphilophus_citrinellus
ENSLACG00000001089	SRRT	95	54.866	ENSAOCG00000009693	srrt	95	54.684	Amphiprion_ocellaris
ENSLACG00000001089	SRRT	92	45.892	ENSAOCG00000009189	-	94	44.934	Amphiprion_ocellaris
ENSLACG00000001089	SRRT	92	45.892	ENSAPEG00000020016	-	94	44.934	Amphiprion_percula
ENSLACG00000001089	SRRT	95	55.280	ENSAPEG00000003646	srrt	95	55.461	Amphiprion_percula
ENSLACG00000001089	SRRT	51	50.330	ENSATEG00000003652	-	86	48.958	Anabas_testudineus
ENSLACG00000001089	SRRT	85	68.750	ENSATEG00000014425	srrt	88	70.943	Anabas_testudineus
ENSLACG00000001089	SRRT	95	62.874	ENSACAG00000001014	SRRT	95	63.057	Anolis_carolinensis
ENSLACG00000001089	SRRT	96	65.059	ENSANAG00000031718	SRRT	95	64.328	Aotus_nancymaae
ENSLACG00000001089	SRRT	53	57.484	ENSACLG00000013156	srrt	92	54.953	Astatotilapia_calliptera
ENSLACG00000001089	SRRT	76	60.194	ENSACLG00000009423	-	94	47.281	Astatotilapia_calliptera
ENSLACG00000001089	SRRT	50	60.274	ENSAMXG00000016671	srrt	92	55.634	Astyanax_mexicanus
ENSLACG00000001089	SRRT	96	63.882	ENSBTAG00000001134	SRRT	95	64.252	Bos_taurus
ENSLACG00000001089	SRRT	72	34.776	WBGene00017085	E01A2.2	59	39.308	Caenorhabditis_elegans
ENSLACG00000001089	SRRT	96	64.706	ENSCJAG00000014917	SRRT	95	63.971	Callithrix_jacchus
ENSLACG00000001089	SRRT	96	65.059	ENSCAFG00000023538	SRRT	95	64.608	Canis_familiaris
ENSLACG00000001089	SRRT	96	64.941	ENSCAFG00020013358	SRRT	99	65.105	Canis_lupus_dingo
ENSLACG00000001089	SRRT	98	62.687	ENSCHIG00000010495	SRRT	95	64.508	Capra_hircus
ENSLACG00000001089	SRRT	96	63.925	ENSTSYG00000036426	SRRT	99	63.909	Carlito_syrichta
ENSLACG00000001089	SRRT	95	63.550	ENSCAPG00000013586	SRRT	99	63.713	Cavia_aperea
ENSLACG00000001089	SRRT	96	64.630	ENSCPOG00000001739	SRRT	95	63.377	Cavia_porcellus
ENSLACG00000001089	SRRT	96	65.059	ENSCCAG00000015877	SRRT	95	64.328	Cebus_capucinus
ENSLACG00000001089	SRRT	96	65.253	ENSCATG00000036306	SRRT	97	64.066	Cercocebus_atys
ENSLACG00000001089	SRRT	96	64.941	ENSCLAG00000007568	SRRT	95	64.090	Chinchilla_lanigera
ENSLACG00000001089	SRRT	96	65.176	ENSCSAG00000017996	SRRT	95	64.447	Chlorocebus_sabaeus
ENSLACG00000001089	SRRT	57	69.048	ENSCHOG00000007815	SRRT	67	69.048	Choloepus_hoffmanni
ENSLACG00000001089	SRRT	68	77.432	ENSCPBG00000011553	SRRT	74	77.432	Chrysemys_picta_bellii
ENSLACG00000001089	SRRT	100	36.819	ENSCING00000003506	-	88	37.124	Ciona_intestinalis
ENSLACG00000001089	SRRT	84	41.958	ENSCSAVG00000008394	-	65	46.250	Ciona_savignyi
ENSLACG00000001089	SRRT	96	64.941	ENSCANG00000034556	SRRT	95	64.628	Colobus_angolensis_palliatus
ENSLACG00000001089	SRRT	96	63.263	ENSCGRG00001001594	Srrt	95	63.582	Cricetulus_griseus_chok1gshd
ENSLACG00000001089	SRRT	88	84.868	ENSCGRG00000007292	Srrt	95	57.920	Cricetulus_griseus_crigri
ENSLACG00000001089	SRRT	51	51.116	ENSCSEG00000005233	-	94	45.793	Cynoglossus_semilaevis
ENSLACG00000001089	SRRT	89	46.752	ENSCVAG00000017344	-	94	48.106	Cyprinodon_variegatus
ENSLACG00000001089	SRRT	95	56.280	ENSCVAG00000019848	srrt	95	56.426	Cyprinodon_variegatus
ENSLACG00000001089	SRRT	53	58.225	ENSDARG00000017762	srrt	95	55.981	Danio_rerio
ENSLACG00000001089	SRRT	96	64.235	ENSDNOG00000003851	SRRT	95	64.608	Dasypus_novemcinctus
ENSLACG00000001089	SRRT	96	64.802	ENSDORG00000005584	Srrt	95	63.615	Dipodomys_ordii
ENSLACG00000001089	SRRT	83	36.140	FBgn0033062	Ars2	56	47.664	Drosophila_melanogaster
ENSLACG00000001089	SRRT	86	76.410	ENSETEG00000016175	SRRT	80	79.085	Echinops_telfairi
ENSLACG00000001089	SRRT	77	42.447	ENSEBUG00000008517	-	72	75.000	Eptatretus_burgeri
ENSLACG00000001089	SRRT	96	64.471	ENSEASG00005016956	SRRT	95	64.727	Equus_asinus_asinus
ENSLACG00000001089	SRRT	96	64.471	ENSECAG00000012292	SRRT	95	64.727	Equus_caballus
ENSLACG00000001089	SRRT	79	86.316	ENSEEUG00000009117	SRRT	81	86.667	Erinaceus_europaeus
ENSLACG00000001089	SRRT	94	64.387	ENSELUG00000006651	srrt	76	77.119	Esox_lucius
ENSLACG00000001089	SRRT	92	47.094	ENSELUG00000021216	-	94	48.227	Esox_lucius
ENSLACG00000001089	SRRT	96	64.118	ENSFCAG00000006855	SRRT	95	64.608	Felis_catus
ENSLACG00000001089	SRRT	96	62.146	ENSFDAG00000021347	SRRT	95	61.831	Fukomys_damarensis
ENSLACG00000001089	SRRT	76	77.632	ENSFHEG00000002756	srrt	87	75.417	Fundulus_heteroclitus
ENSLACG00000001089	SRRT	95	54.726	ENSGMOG00000018619	srrt	93	53.039	Gadus_morhua
ENSLACG00000001089	SRRT	67	60.870	ENSGMOG00000018694	-	72	60.870	Gadus_morhua
ENSLACG00000001089	SRRT	53	57.918	ENSGAFG00000005423	srrt	95	55.229	Gambusia_affinis
ENSLACG00000001089	SRRT	92	46.192	ENSGAFG00000020383	-	94	47.388	Gambusia_affinis
ENSLACG00000001089	SRRT	92	45.335	ENSGACG00000001100	-	94	43.981	Gasterosteus_aculeatus
ENSLACG00000001089	SRRT	95	55.285	ENSGACG00000020387	srrt	95	53.855	Gasterosteus_aculeatus
ENSLACG00000001089	SRRT	96	65.412	ENSGGOG00000001508	SRRT	96	64.988	Gorilla_gorilla
ENSLACG00000001089	SRRT	53	57.701	ENSHBUG00000002942	srrt	92	55.071	Haplochromis_burtoni
ENSLACG00000001089	SRRT	96	64.664	ENSHGLG00000008344	Srrt	95	63.929	Heterocephalus_glaber_female
ENSLACG00000001089	SRRT	96	64.782	ENSHGLG00100018857	Srrt	95	64.466	Heterocephalus_glaber_male
ENSLACG00000001089	SRRT	98	54.566	ENSHCOG00000005403	srrt	95	54.064	Hippocampus_comes
ENSLACG00000001089	SRRT	92	45.929	ENSHCOG00000008904	-	94	45.499	Hippocampus_comes
ENSLACG00000001089	SRRT	53	59.827	ENSIPUG00000021150	srrt	95	55.543	Ictalurus_punctatus
ENSLACG00000001089	SRRT	96	64.941	ENSSTOG00000013776	SRRT	95	64.388	Ictidomys_tridecemlineatus
ENSLACG00000001089	SRRT	96	63.925	ENSJJAG00000010446	Srrt	95	64.062	Jaculus_jaculus
ENSLACG00000001089	SRRT	51	49.894	ENSKMAG00000008468	-	94	46.071	Kryptolebias_marmoratus
ENSLACG00000001089	SRRT	95	54.843	ENSKMAG00000013599	srrt	95	55.529	Kryptolebias_marmoratus
ENSLACG00000001089	SRRT	88	72.355	ENSLBEG00000016308	srrt	86	70.566	Labrus_bergylta
ENSLACG00000001089	SRRT	84	67.803	ENSLOCG00000013658	srrt	89	68.571	Lepisosteus_oculatus
ENSLACG00000001089	SRRT	96	64.865	ENSLAFG00000007725	SRRT	95	64.447	Loxodonta_africana
ENSLACG00000001089	SRRT	96	65.059	ENSMFAG00000033745	SRRT	99	64.066	Macaca_fascicularis
ENSLACG00000001089	SRRT	96	65.176	ENSMMUG00000021255	SRRT	95	64.447	Macaca_mulatta
ENSLACG00000001089	SRRT	96	65.253	ENSMNEG00000041864	SRRT	97	64.066	Macaca_nemestrina
ENSLACG00000001089	SRRT	96	65.059	ENSMLEG00000029479	SRRT	98	64.066	Mandrillus_leucophaeus
ENSLACG00000001089	SRRT	53	56.304	ENSMAMG00000014311	srrt	95	56.671	Mastacembelus_armatus
ENSLACG00000001089	SRRT	59	62.136	ENSMAMG00000010681	-	94	46.476	Mastacembelus_armatus
ENSLACG00000001089	SRRT	76	60.194	ENSMZEG00005028002	-	94	47.759	Maylandia_zebra
ENSLACG00000001089	SRRT	53	57.484	ENSMZEG00005016135	srrt	92	54.953	Maylandia_zebra
ENSLACG00000001089	SRRT	96	64.000	ENSMAUG00000011386	Srrt	95	63.701	Mesocricetus_auratus
ENSLACG00000001089	SRRT	96	64.824	ENSMICG00000009471	SRRT	97	63.593	Microcebus_murinus
ENSLACG00000001089	SRRT	96	63.529	ENSMOCG00000001971	Srrt	95	63.377	Microtus_ochrogaster
ENSLACG00000001089	SRRT	95	57.265	ENSMMOG00000016399	srrt	95	56.250	Mola_mola
ENSLACG00000001089	SRRT	82	44.415	ENSMMOG00000011137	-	88	43.381	Mola_mola
ENSLACG00000001089	SRRT	51	62.749	ENSMODG00000004862	SRRT	84	63.311	Monodelphis_domestica
ENSLACG00000001089	SRRT	90	52.898	ENSMALG00000018604	srrt	99	50.646	Monopterus_albus
ENSLACG00000001089	SRRT	96	63.294	MGP_CAROLIEiJ_G0027870	Srrt	98	67.176	Mus_caroli
ENSLACG00000001089	SRRT	96	63.294	ENSMUSG00000037364	Srrt	97	67.176	Mus_musculus
ENSLACG00000001089	SRRT	96	63.647	MGP_PahariEiJ_G0024456	Srrt	100	65.299	Mus_pahari
ENSLACG00000001089	SRRT	96	63.294	MGP_SPRETEiJ_G0028875	Srrt	98	67.176	Mus_spretus
ENSLACG00000001089	SRRT	96	64.000	ENSMPUG00000015839	SRRT	95	64.489	Mustela_putorius_furo
ENSLACG00000001089	SRRT	96	64.387	ENSMLUG00000009975	SRRT	95	64.964	Myotis_lucifugus
ENSLACG00000001089	SRRT	96	63.369	ENSNGAG00000023715	Srrt	100	60.787	Nannospalax_galili
ENSLACG00000001089	SRRT	53	56.739	ENSNBRG00000019100	srrt	95	54.019	Neolamprologus_brichardi
ENSLACG00000001089	SRRT	95	60.723	ENSNLEG00000011987	SRRT	99	59.653	Nomascus_leucogenys
ENSLACG00000001089	SRRT	96	54.299	ENSMEUG00000011941	SRRT	94	53.204	Notamacropus_eugenii
ENSLACG00000001089	SRRT	64	83.206	ENSOPRG00000002502	-	67	83.206	Ochotona_princeps
ENSLACG00000001089	SRRT	96	64.075	ENSODEG00000016856	SRRT	95	63.832	Octodon_degus
ENSLACG00000001089	SRRT	53	58.225	ENSONIG00000004242	srrt	95	56.404	Oreochromis_niloticus
ENSLACG00000001089	SRRT	76	60.680	ENSONIG00000016080	-	94	48.113	Oreochromis_niloticus
ENSLACG00000001089	SRRT	98	56.782	ENSORLG00000008120	srrt	95	54.982	Oryzias_latipes
ENSLACG00000001089	SRRT	98	56.946	ENSORLG00020003058	srrt	95	54.748	Oryzias_latipes_hni
ENSLACG00000001089	SRRT	98	57.176	ENSORLG00015008062	srrt	53	54.989	Oryzias_latipes_hsok
ENSLACG00000001089	SRRT	98	58.894	ENSOMEG00000003155	srrt	95	56.066	Oryzias_melastigma
ENSLACG00000001089	SRRT	92	48.415	ENSOMEG00000006963	-	94	48.234	Oryzias_melastigma
ENSLACG00000001089	SRRT	96	65.176	ENSOGAG00000017242	SRRT	95	64.328	Otolemur_garnettii
ENSLACG00000001089	SRRT	96	64.118	ENSOARG00000015645	SRRT	95	64.551	Ovis_aries
ENSLACG00000001089	SRRT	96	65.176	ENSPPAG00000041090	SRRT	97	62.884	Pan_paniscus
ENSLACG00000001089	SRRT	96	64.000	ENSPPRG00000009557	SRRT	95	64.826	Panthera_pardus
ENSLACG00000001089	SRRT	96	64.118	ENSPTIG00000014355	SRRT	95	64.608	Panthera_tigris_altaica
ENSLACG00000001089	SRRT	96	65.176	ENSPTRG00000019511	SRRT	99	62.230	Pan_troglodytes
ENSLACG00000001089	SRRT	95	64.817	ENSPANG00000020763	SRRT	96	64.066	Papio_anubis
ENSLACG00000001089	SRRT	98	60.495	ENSPKIG00000005434	srrt	95	59.976	Paramormyrops_kingsleyae
ENSLACG00000001089	SRRT	94	56.496	ENSPKIG00000022212	-	95	56.699	Paramormyrops_kingsleyae
ENSLACG00000001089	SRRT	95	65.625	ENSPSIG00000016311	SRRT	95	65.542	Pelodiscus_sinensis
ENSLACG00000001089	SRRT	96	63.722	ENSPEMG00000010834	Srrt	95	64.192	Peromyscus_maniculatus_bairdii
ENSLACG00000001089	SRRT	96	49.582	ENSPMAG00000009614	-	95	47.533	Petromyzon_marinus
ENSLACG00000001089	SRRT	96	65.070	ENSPCIG00000000816	SRRT	95	63.787	Phascolarctos_cinereus
ENSLACG00000001089	SRRT	53	58.009	ENSPFOG00000005704	srrt	95	55.751	Poecilia_formosa
ENSLACG00000001089	SRRT	92	47.073	ENSPFOG00000016554	-	94	47.472	Poecilia_formosa
ENSLACG00000001089	SRRT	92	46.758	ENSPLAG00000004526	-	94	47.167	Poecilia_latipinna
ENSLACG00000001089	SRRT	95	55.828	ENSPLAG00000021992	srrt	95	55.309	Poecilia_latipinna
ENSLACG00000001089	SRRT	89	46.015	ENSPMEG00000001520	-	94	46.438	Poecilia_mexicana
ENSLACG00000001089	SRRT	79	79.245	ENSPMEG00000001182	srrt	84	77.830	Poecilia_mexicana
ENSLACG00000001089	SRRT	95	56.792	ENSPREG00000022308	srrt	95	55.516	Poecilia_reticulata
ENSLACG00000001089	SRRT	96	59.592	ENSPPYG00000017432	SRRT	95	58.937	Pongo_abelii
ENSLACG00000001089	SRRT	96	61.565	ENSPCAG00000001621	SRRT	95	62.146	Procavia_capensis
ENSLACG00000001089	SRRT	96	64.824	ENSPCOG00000025751	SRRT	95	63.971	Propithecus_coquereli
ENSLACG00000001089	SRRT	66	64.356	ENSPVAG00000000834	SRRT	86	62.060	Pteropus_vampyrus
ENSLACG00000001089	SRRT	53	57.484	ENSPNYG00000018710	srrt	95	54.953	Pundamilia_nyererei
ENSLACG00000001089	SRRT	66	84.277	ENSPNAG00000010629	srrt	94	80.892	Pygocentrus_nattereri
ENSLACG00000001089	SRRT	96	65.176	ENSRBIG00000035718	SRRT	97	64.066	Rhinopithecus_bieti
ENSLACG00000001089	SRRT	96	65.176	ENSRROG00000030622	SRRT	98	64.066	Rhinopithecus_roxellana
ENSLACG00000001089	SRRT	98	63.116	ENSSBOG00000033570	SRRT	96	64.628	Saimiri_boliviensis_boliviensis
ENSLACG00000001089	SRRT	70	59.598	ENSSHAG00000007349	-	99	57.969	Sarcophilus_harrisii
ENSLACG00000001089	SRRT	94	59.176	ENSSFOG00015017293	srrt	95	58.858	Scleropages_formosus
ENSLACG00000001089	SRRT	51	50.336	ENSSMAG00000018195	-	94	46.344	Scophthalmus_maximus
ENSLACG00000001089	SRRT	95	56.601	ENSSMAG00000015342	srrt	95	55.936	Scophthalmus_maximus
ENSLACG00000001089	SRRT	85	61.736	ENSSDUG00000012049	srrt	95	57.317	Seriola_dumerili
ENSLACG00000001089	SRRT	95	53.231	ENSSLDG00000017477	srrt	86	72.453	Seriola_lalandi_dorsalis
ENSLACG00000001089	SRRT	53	57.759	ENSSPAG00000005665	srrt	94	54.684	Stegastes_partitus
ENSLACG00000001089	SRRT	75	48.899	ENSSPAG00000018943	-	93	46.762	Stegastes_partitus
ENSLACG00000001089	SRRT	95	66.104	ENSSSCG00000024789	SRRT	99	65.884	Sus_scrofa
ENSLACG00000001089	SRRT	90	45.997	ENSTRUG00000000023	-	92	46.532	Takifugu_rubripes
ENSLACG00000001089	SRRT	53	56.304	ENSTRUG00000016075	srrt	95	55.357	Takifugu_rubripes
ENSLACG00000001089	SRRT	57	47.305	ENSTNIG00000003111	-	50	48.980	Tetraodon_nigroviridis
ENSLACG00000001089	SRRT	73	49.693	ENSTNIG00000011779	srrt	100	49.231	Tetraodon_nigroviridis
ENSLACG00000001089	SRRT	58	80.000	ENSTBEG00000005212	SRRT	54	86.364	Tupaia_belangeri
ENSLACG00000001089	SRRT	100	64.938	ENSTTRG00000011104	SRRT	95	65.083	Tursiops_truncatus
ENSLACG00000001089	SRRT	95	64.227	ENSUAMG00000027997	SRRT	98	64.804	Ursus_americanus
ENSLACG00000001089	SRRT	96	64.353	ENSUMAG00000011295	SRRT	95	64.846	Ursus_maritimus
ENSLACG00000001089	SRRT	96	65.059	ENSVVUG00000023572	SRRT	95	64.608	Vulpes_vulpes
ENSLACG00000001089	SRRT	73	84.181	ENSXETG00000025124	srrt	68	83.333	Xenopus_tropicalis
ENSLACG00000001089	SRRT	53	58.568	ENSXMAG00000007627	srrt	95	56.667	Xiphophorus_maculatus
ENSLACG00000001089	SRRT	92	46.442	ENSXMAG00000002090	-	94	48.134	Xiphophorus_maculatus