EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000001129 (Gene tree)
Gene ID: 102352655
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 24199 bases
Position: chrJH131221.1:10559-34757
Accession: 102352655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001259	HAT	PF02184.16	1.8e-37	1	2
ENSLACP00000001259	HAT	PF02184.16	1.8e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001271	CRNKL1-201	2393	XM_006013714	ENSLACP00000001259	684 (aa)	XP_006013776	H2ZV38

Gene Model

Click here to download ENSLACG00000001129's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001129	CRNKL1	99	87.701	ENSG00000101343	CRNKL1	99	87.701	Homo_sapiens
ENSLACG00000001129	CRNKL1	99	89.021	ENSAPOG00000009705	crnkl1	98	87.408	Acanthochromis_polyacanthus
ENSLACG00000001129	CRNKL1	99	88.053	ENSAMEG00000000270	CRNKL1	82	88.141	Ailuropoda_melanoleuca
ENSLACG00000001129	CRNKL1	98	87.370	ENSACIG00000015267	crnkl1	89	88.006	Amphilophus_citrinellus
ENSLACG00000001129	CRNKL1	99	88.872	ENSAOCG00000021964	crnkl1	89	88.872	Amphiprion_ocellaris
ENSLACG00000001129	CRNKL1	99	89.021	ENSAPEG00000015041	crnkl1	89	89.021	Amphiprion_percula
ENSLACG00000001129	CRNKL1	99	87.574	ENSATEG00000001068	crnkl1	89	87.574	Anabas_testudineus
ENSLACG00000001129	CRNKL1	99	86.696	ENSAPLG00000013105	CRNKL1	99	86.696	Anas_platyrhynchos
ENSLACG00000001129	CRNKL1	100	88.450	ENSACAG00000005284	CRNKL1	99	88.450	Anolis_carolinensis
ENSLACG00000001129	CRNKL1	92	88.413	ENSANAG00000024889	CRNKL1	99	88.413	Aotus_nancymaae
ENSLACG00000001129	CRNKL1	99	88.348	ENSACLG00000010813	crnkl1	90	88.348	Astatotilapia_calliptera
ENSLACG00000001129	CRNKL1	97	90.376	ENSAMXG00000018334	crnkl1	92	89.312	Astyanax_mexicanus
ENSLACG00000001129	CRNKL1	99	87.830	ENSBTAG00000008472	CRNKL1	98	87.830	Bos_taurus
ENSLACG00000001129	CRNKL1	94	63.453	WBGene00019762	M03F8.3	91	62.372	Caenorhabditis_elegans
ENSLACG00000001129	CRNKL1	99	87.737	ENSCJAG00000005393	CRNKL1	99	87.737	Callithrix_jacchus
ENSLACG00000001129	CRNKL1	99	87.906	ENSCAFG00000005333	CRNKL1	94	87.994	Canis_familiaris
ENSLACG00000001129	CRNKL1	99	87.994	ENSCAFG00020027488	CRNKL1	99	87.994	Canis_lupus_dingo
ENSLACG00000001129	CRNKL1	99	87.097	ENSCHIG00000013171	CRNKL1	98	87.097	Capra_hircus
ENSLACG00000001129	CRNKL1	99	87.408	ENSTSYG00000004197	CRNKL1	99	87.408	Carlito_syrichta
ENSLACG00000001129	CRNKL1	90	86.386	ENSCAPG00000010501	CRNKL1	99	86.386	Cavia_aperea
ENSLACG00000001129	CRNKL1	99	87.262	ENSCPOG00000004418	CRNKL1	99	87.262	Cavia_porcellus
ENSLACG00000001129	CRNKL1	99	87.555	ENSCCAG00000027037	CRNKL1	99	87.555	Cebus_capucinus
ENSLACG00000001129	CRNKL1	99	87.555	ENSCATG00000034247	CRNKL1	99	87.555	Cercocebus_atys
ENSLACG00000001129	CRNKL1	99	88.141	ENSCLAG00000013859	CRNKL1	99	88.141	Chinchilla_lanigera
ENSLACG00000001129	CRNKL1	99	87.555	ENSCSAG00000011434	CRNKL1	99	87.555	Chlorocebus_sabaeus
ENSLACG00000001129	CRNKL1	99	87.168	ENSCHOG00000006371	CRNKL1	83	87.262	Choloepus_hoffmanni
ENSLACG00000001129	CRNKL1	100	89.181	ENSCPBG00000023501	CRNKL1	99	89.181	Chrysemys_picta_bellii
ENSLACG00000001129	CRNKL1	97	69.578	ENSCING00000002709	-	99	68.732	Ciona_intestinalis
ENSLACG00000001129	CRNKL1	99	87.555	ENSCANG00000038789	CRNKL1	99	87.555	Colobus_angolensis_palliatus
ENSLACG00000001129	CRNKL1	99	87.701	ENSCGRG00001001115	-	99	87.701	Cricetulus_griseus_chok1gshd
ENSLACG00000001129	CRNKL1	99	87.701	ENSCGRG00001000687	-	99	87.701	Cricetulus_griseus_chok1gshd
ENSLACG00000001129	CRNKL1	99	87.701	ENSCGRG00000007854	Crnkl1	99	87.701	Cricetulus_griseus_crigri
ENSLACG00000001129	CRNKL1	99	87.500	ENSCSEG00000005594	crnkl1	86	87.500	Cynoglossus_semilaevis
ENSLACG00000001129	CRNKL1	98	88.606	ENSCVAG00000015172	crnkl1	91	87.611	Cyprinodon_variegatus
ENSLACG00000001129	CRNKL1	97	88.084	ENSDARG00000007901	crnkl1	91	87.097	Danio_rerio
ENSLACG00000001129	CRNKL1	99	87.977	ENSDNOG00000016226	CRNKL1	95	87.977	Dasypus_novemcinctus
ENSLACG00000001129	CRNKL1	98	80.867	ENSDORG00000023724	-	99	80.867	Dipodomys_ordii
ENSLACG00000001129	CRNKL1	98	80.328	ENSDORG00000030174	-	99	80.328	Dipodomys_ordii
ENSLACG00000001129	CRNKL1	99	86.067	ENSDORG00000000394	-	99	86.067	Dipodomys_ordii
ENSLACG00000001129	CRNKL1	97	67.857	FBgn0000377	crn	98	66.763	Drosophila_melanogaster
ENSLACG00000001129	CRNKL1	99	77.680	ENSETEG00000003711	CRNKL1	83	77.680	Echinops_telfairi
ENSLACG00000001129	CRNKL1	99	62.195	ENSEBUG00000013461	crnkl1	95	56.444	Eptatretus_burgeri
ENSLACG00000001129	CRNKL1	99	87.994	ENSEASG00005002072	CRNKL1	99	87.994	Equus_asinus_asinus
ENSLACG00000001129	CRNKL1	99	87.994	ENSECAG00000022215	CRNKL1	99	87.994	Equus_caballus
ENSLACG00000001129	CRNKL1	99	85.546	ENSEEUG00000000413	CRNKL1	92	85.652	Erinaceus_europaeus
ENSLACG00000001129	CRNKL1	98	87.892	ENSELUG00000015424	crnkl1	96	87.740	Esox_lucius
ENSLACG00000001129	CRNKL1	99	88.141	ENSFCAG00000000714	CRNKL1	99	88.141	Felis_catus
ENSLACG00000001129	CRNKL1	98	87.015	ENSFALG00000004611	CRNKL1	99	87.015	Ficedula_albicollis
ENSLACG00000001129	CRNKL1	99	87.848	ENSFDAG00000000604	CRNKL1	99	87.848	Fukomys_damarensis
ENSLACG00000001129	CRNKL1	98	88.095	ENSFHEG00000013163	crnkl1	89	87.007	Fundulus_heteroclitus
ENSLACG00000001129	CRNKL1	98	86.697	ENSGMOG00000007609	crnkl1	94	85.652	Gadus_morhua
ENSLACG00000001129	CRNKL1	100	89.327	ENSGALG00000008429	CRNKL1	99	89.327	Gallus_gallus
ENSLACG00000001129	CRNKL1	98	87.612	ENSGAFG00000014249	crnkl1	89	87.278	Gambusia_affinis
ENSLACG00000001129	CRNKL1	99	86.324	ENSGACG00000011852	crnkl1	91	86.324	Gasterosteus_aculeatus
ENSLACG00000001129	CRNKL1	96	87.615	ENSGAGG00000021233	CRNKL1	99	87.722	Gopherus_agassizii
ENSLACG00000001129	CRNKL1	99	87.701	ENSGGOG00000014176	CRNKL1	99	87.701	Gorilla_gorilla
ENSLACG00000001129	CRNKL1	99	88.348	ENSHBUG00000005246	crnkl1	90	88.348	Haplochromis_burtoni
ENSLACG00000001129	CRNKL1	99	87.701	ENSHGLG00000010856	CRNKL1	99	87.701	Heterocephalus_glaber_female
ENSLACG00000001129	CRNKL1	99	87.701	ENSHGLG00100011521	CRNKL1	99	87.701	Heterocephalus_glaber_male
ENSLACG00000001129	CRNKL1	98	86.377	ENSHCOG00000006420	crnkl1	96	86.377	Hippocampus_comes
ENSLACG00000001129	CRNKL1	93	70.126	ENSIPUG00000000315	-	99	71.339	Ictalurus_punctatus
ENSLACG00000001129	CRNKL1	99	75.959	ENSIPUG00000006836	-	99	75.959	Ictalurus_punctatus
ENSLACG00000001129	CRNKL1	95	89.060	ENSIPUG00000006751	crnkl1	92	88.024	Ictalurus_punctatus
ENSLACG00000001129	CRNKL1	99	87.848	ENSSTOG00000014747	CRNKL1	99	87.848	Ictidomys_tridecemlineatus
ENSLACG00000001129	CRNKL1	99	85.837	ENSJJAG00000016926	Crnkl1	99	85.837	Jaculus_jaculus
ENSLACG00000001129	CRNKL1	100	87.172	ENSKMAG00000003620	crnkl1	86	88.410	Kryptolebias_marmoratus
ENSLACG00000001129	CRNKL1	98	72.700	ENSLBEG00000003543	crnkl1	93	72.174	Labrus_bergylta
ENSLACG00000001129	CRNKL1	97	91.579	ENSLOCG00000016889	crnkl1	94	90.828	Lepisosteus_oculatus
ENSLACG00000001129	CRNKL1	99	87.427	ENSLAFG00000004512	CRNKL1	99	88.158	Loxodonta_africana
ENSLACG00000001129	CRNKL1	99	87.555	ENSMFAG00000039893	CRNKL1	99	87.555	Macaca_fascicularis
ENSLACG00000001129	CRNKL1	99	87.555	ENSMMUG00000007709	CRNKL1	99	87.555	Macaca_mulatta
ENSLACG00000001129	CRNKL1	99	87.555	ENSMNEG00000037490	CRNKL1	99	87.555	Macaca_nemestrina
ENSLACG00000001129	CRNKL1	99	87.555	ENSMLEG00000034885	CRNKL1	99	87.555	Mandrillus_leucophaeus
ENSLACG00000001129	CRNKL1	99	87.316	ENSMAMG00000008757	crnkl1	89	87.316	Mastacembelus_armatus
ENSLACG00000001129	CRNKL1	99	88.348	ENSMZEG00005022345	crnkl1	90	88.348	Maylandia_zebra
ENSLACG00000001129	CRNKL1	100	88.613	ENSMGAG00000003452	CRNKL1	94	88.613	Meleagris_gallopavo
ENSLACG00000001129	CRNKL1	99	87.555	ENSMAUG00000020764	Crnkl1	99	87.555	Mesocricetus_auratus
ENSLACG00000001129	CRNKL1	99	87.701	ENSMICG00000006048	CRNKL1	99	87.701	Microcebus_murinus
ENSLACG00000001129	CRNKL1	97	63.705	ENSMOCG00000004179	-	95	63.881	Microtus_ochrogaster
ENSLACG00000001129	CRNKL1	99	79.856	ENSMOCG00000000681	-	99	79.856	Microtus_ochrogaster
ENSLACG00000001129	CRNKL1	92	85.601	ENSMMOG00000017601	crnkl1	97	85.601	Mola_mola
ENSLACG00000001129	CRNKL1	99	82.396	ENSMODG00000010857	-	98	82.396	Monodelphis_domestica
ENSLACG00000001129	CRNKL1	99	85.549	ENSMODG00000005961	-	99	85.549	Monodelphis_domestica
ENSLACG00000001129	CRNKL1	100	60.938	ENSMALG00000011211	crnkl1	93	68.990	Monopterus_albus
ENSLACG00000001129	CRNKL1	99	87.994	MGP_CAROLIEiJ_G0024394	Crnkl1	99	87.994	Mus_caroli
ENSLACG00000001129	CRNKL1	99	87.848	ENSMUSG00000001767	Crnkl1	99	87.848	Mus_musculus
ENSLACG00000001129	CRNKL1	99	86.823	MGP_PahariEiJ_G0025838	Crnkl1	99	86.823	Mus_pahari
ENSLACG00000001129	CRNKL1	99	87.848	MGP_SPRETEiJ_G0025312	Crnkl1	99	87.848	Mus_spretus
ENSLACG00000001129	CRNKL1	99	88.141	ENSMPUG00000001226	CRNKL1	99	88.141	Mustela_putorius_furo
ENSLACG00000001129	CRNKL1	99	87.629	ENSMLUG00000016513	CRNKL1	89	87.719	Myotis_lucifugus
ENSLACG00000001129	CRNKL1	99	85.776	ENSNGAG00000023097	Crnkl1	99	85.776	Nannospalax_galili
ENSLACG00000001129	CRNKL1	99	88.496	ENSNBRG00000007867	crnkl1	89	88.496	Neolamprologus_brichardi
ENSLACG00000001129	CRNKL1	99	84.480	ENSNLEG00000009862	CRNKL1	99	84.480	Nomascus_leucogenys
ENSLACG00000001129	CRNKL1	99	81.406	ENSMEUG00000002361	-	99	81.406	Notamacropus_eugenii
ENSLACG00000001129	CRNKL1	97	88.739	ENSMEUG00000012167	-	99	88.739	Notamacropus_eugenii
ENSLACG00000001129	CRNKL1	86	59.846	ENSOPRG00000009242	-	61	59.846	Ochotona_princeps
ENSLACG00000001129	CRNKL1	99	87.701	ENSODEG00000012175	CRNKL1	99	87.701	Octodon_degus
ENSLACG00000001129	CRNKL1	99	88.348	ENSONIG00000018728	crnkl1	89	88.348	Oreochromis_niloticus
ENSLACG00000001129	CRNKL1	99	86.892	ENSOCUG00000015484	CRNKL1	82	87.573	Oryctolagus_cuniculus
ENSLACG00000001129	CRNKL1	98	87.256	ENSORLG00000017240	crnkl1	96	82.200	Oryzias_latipes
ENSLACG00000001129	CRNKL1	100	85.965	ENSORLG00020001742	crnkl1	89	87.406	Oryzias_latipes_hni
ENSLACG00000001129	CRNKL1	98	87.406	ENSORLG00015019564	crnkl1	89	87.406	Oryzias_latipes_hsok
ENSLACG00000001129	CRNKL1	99	87.278	ENSOMEG00000019895	crnkl1	90	87.278	Oryzias_melastigma
ENSLACG00000001129	CRNKL1	99	87.701	ENSOGAG00000011544	CRNKL1	99	87.701	Otolemur_garnettii
ENSLACG00000001129	CRNKL1	99	88.035	ENSOARG00000002150	CRNKL1	89	88.123	Ovis_aries
ENSLACG00000001129	CRNKL1	99	86.431	ENSPPAG00000027847	CRNKL1	83	86.530	Pan_paniscus
ENSLACG00000001129	CRNKL1	99	88.141	ENSPPRG00000001955	CRNKL1	99	88.141	Panthera_pardus
ENSLACG00000001129	CRNKL1	99	88.141	ENSPTIG00000007393	CRNKL1	99	88.141	Panthera_tigris_altaica
ENSLACG00000001129	CRNKL1	99	87.555	ENSPTRG00000030609	CRNKL1	99	87.555	Pan_troglodytes
ENSLACG00000001129	CRNKL1	99	87.555	ENSPANG00000017420	CRNKL1	99	87.555	Papio_anubis
ENSLACG00000001129	CRNKL1	97	84.084	ENSPKIG00000017093	crnkl1	90	82.754	Paramormyrops_kingsleyae
ENSLACG00000001129	CRNKL1	99	88.840	ENSPSIG00000012705	CRNKL1	99	88.840	Pelodiscus_sinensis
ENSLACG00000001129	CRNKL1	99	81.858	ENSPMGG00000006263	crnkl1	96	81.029	Periophthalmus_magnuspinnatus
ENSLACG00000001129	CRNKL1	99	87.994	ENSPEMG00000000073	-	99	87.994	Peromyscus_maniculatus_bairdii
ENSLACG00000001129	CRNKL1	100	81.250	ENSPMAG00000002250	crnkl1	99	81.250	Petromyzon_marinus
ENSLACG00000001129	CRNKL1	99	87.977	ENSPCIG00000025825	CRNKL1	95	87.977	Phascolarctos_cinereus
ENSLACG00000001129	CRNKL1	98	87.463	ENSPFOG00000005102	crnkl1	92	86.931	Poecilia_formosa
ENSLACG00000001129	CRNKL1	98	87.463	ENSPLAG00000007288	crnkl1	89	86.931	Poecilia_latipinna
ENSLACG00000001129	CRNKL1	98	87.612	ENSPMEG00000008865	crnkl1	92	87.168	Poecilia_mexicana
ENSLACG00000001129	CRNKL1	98	87.406	ENSPREG00000012615	crnkl1	92	86.237	Poecilia_reticulata
ENSLACG00000001129	CRNKL1	99	87.463	ENSPPYG00000010747	CRNKL1	81	87.555	Pongo_abelii
ENSLACG00000001129	CRNKL1	99	83.432	ENSPCAG00000003296	CRNKL1	84	83.554	Procavia_capensis
ENSLACG00000001129	CRNKL1	99	86.726	ENSPCOG00000017608	CRNKL1	83	86.823	Propithecus_coquereli
ENSLACG00000001129	CRNKL1	99	87.758	ENSPVAG00000006207	CRNKL1	83	87.848	Pteropus_vampyrus
ENSLACG00000001129	CRNKL1	99	88.201	ENSPNYG00000001977	crnkl1	90	88.201	Pundamilia_nyererei
ENSLACG00000001129	CRNKL1	98	90.597	ENSPNAG00000001507	crnkl1	98	86.006	Pygocentrus_nattereri
ENSLACG00000001129	CRNKL1	99	87.701	ENSRNOG00000040045	Crnkl1	99	87.701	Rattus_norvegicus
ENSLACG00000001129	CRNKL1	99	87.848	ENSRNOG00000010587	Crnkl1	99	87.848	Rattus_norvegicus
ENSLACG00000001129	CRNKL1	99	87.408	ENSRBIG00000031770	CRNKL1	99	87.408	Rhinopithecus_bieti
ENSLACG00000001129	CRNKL1	99	87.262	ENSRROG00000040450	CRNKL1	99	87.262	Rhinopithecus_roxellana
ENSLACG00000001129	CRNKL1	95	37.881	YLR117C	CLF1	99	37.971	Saccharomyces_cerevisiae
ENSLACG00000001129	CRNKL1	99	87.555	ENSSBOG00000029672	CRNKL1	99	87.555	Saimiri_boliviensis_boliviensis
ENSLACG00000001129	CRNKL1	96	72.273	ENSSHAG00000011199	CRNKL1	99	72.273	Sarcophilus_harrisii
ENSLACG00000001129	CRNKL1	97	88.989	ENSSFOG00015000946	crnkl1	89	87.408	Scleropages_formosus
ENSLACG00000001129	CRNKL1	98	87.240	ENSSMAG00000007933	crnkl1	87	87.240	Scophthalmus_maximus
ENSLACG00000001129	CRNKL1	98	82.344	ENSSDUG00000012625	crnkl1	86	82.344	Seriola_dumerili
ENSLACG00000001129	CRNKL1	98	89.153	ENSSLDG00000021413	crnkl1	87	89.153	Seriola_lalandi_dorsalis
ENSLACG00000001129	CRNKL1	99	87.116	ENSSARG00000006443	CRNKL1	82	87.116	Sorex_araneus
ENSLACG00000001129	CRNKL1	100	88.596	ENSSPUG00000005254	CRNKL1	99	88.596	Sphenodon_punctatus
ENSLACG00000001129	CRNKL1	98	89.205	ENSSPAG00000016150	crnkl1	86	89.205	Stegastes_partitus
ENSLACG00000001129	CRNKL1	99	87.994	ENSSSCG00000038587	CRNKL1	99	87.994	Sus_scrofa
ENSLACG00000001129	CRNKL1	100	87.445	ENSTGUG00000007645	CRNKL1	98	87.445	Taeniopygia_guttata
ENSLACG00000001129	CRNKL1	98	82.537	ENSTRUG00000015417	crnkl1	90	81.938	Takifugu_rubripes
ENSLACG00000001129	CRNKL1	98	86.826	ENSTNIG00000010710	crnkl1	99	85.798	Tetraodon_nigroviridis
ENSLACG00000001129	CRNKL1	91	86.880	ENSTBEG00000001304	CRNKL1	82	86.984	Tupaia_belangeri
ENSLACG00000001129	CRNKL1	91	84.640	ENSTTRG00000000484	CRNKL1	81	84.762	Tursiops_truncatus
ENSLACG00000001129	CRNKL1	99	88.141	ENSUAMG00000018586	CRNKL1	99	88.141	Ursus_americanus
ENSLACG00000001129	CRNKL1	99	88.141	ENSUMAG00000024957	CRNKL1	99	88.141	Ursus_maritimus
ENSLACG00000001129	CRNKL1	99	87.906	ENSVVUG00000012559	CRNKL1	82	87.994	Vulpes_vulpes
ENSLACG00000001129	CRNKL1	99	88.726	ENSXETG00000009698	crnkl1	99	88.726	Xenopus_tropicalis
ENSLACG00000001129	CRNKL1	98	86.736	ENSXCOG00000000824	crnkl1	91	85.965	Xiphophorus_couchianus
ENSLACG00000001129	CRNKL1	98	87.761	ENSXMAG00000006896	crnkl1	91	86.969	Xiphophorus_maculatus