EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000001186 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2900 bases
Position: chrJH132732.1:11580-14479
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001322	RVT_1	PF00078.27	1.1e-17	1	1
ENSLACP00000001321	RVT_1	PF00078.27	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001333	-	2154	-	ENSLACP00000001321	718 (aa)	-	H2ZVA0
ENSLACT00000001334	-	1656	-	ENSLACP00000001322	552 (aa)	-	H2ZVA1

Gene Model

Click here to download ENSLACG00000001186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001186's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000001186	-	87	81.240	ENSLACG00000003314	-	60	81.240
ENSLACG00000001186	-	84	30.804	ENSLACG00000008355	-	95	30.804
ENSLACG00000001186	-	99	34.059	ENSLACG00000014947	-	53	36.434
ENSLACG00000001186	-	99	42.710	ENSLACG00000010776	-	100	42.710
ENSLACG00000001186	-	99	38.994	ENSLACG00000010862	-	81	36.770
ENSLACG00000001186	-	55	31.850	ENSLACG00000003991	-	50	31.850
ENSLACG00000001186	-	56	49.074	ENSLACG00000016284	-	100	37.615
ENSLACG00000001186	-	65	41.322	ENSLACG00000002169	-	77	41.322
ENSLACG00000001186	-	84	30.420	ENSLACG00000007131	-	70	36.127
ENSLACG00000001186	-	100	41.003	ENSLACG00000009168	-	88	41.003
ENSLACG00000001186	-	65	43.434	ENSLACG00000017143	-	69	45.558
ENSLACG00000001186	-	52	76.943	ENSLACG00000010367	-	55	74.129

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001186	-	70	32.427	ENSAPEG00000014936	-	65	30.177	Amphiprion_percula
ENSLACG00000001186	-	88	31.193	ENSATEG00000019692	-	55	31.193	Anabas_testudineus
ENSLACG00000001186	-	65	32.848	ENSACLG00000007712	-	82	32.848	Astatotilapia_calliptera
ENSLACG00000001186	-	53	32.812	ENSACLG00000013847	-	87	32.812	Astatotilapia_calliptera
ENSLACG00000001186	-	89	33.981	ENSACLG00000004561	-	58	33.981	Astatotilapia_calliptera
ENSLACG00000001186	-	55	38.000	ENSAMXG00000043469	-	98	38.000	Astyanax_mexicanus
ENSLACG00000001186	-	51	33.495	ENSAMXG00000038502	-	84	33.495	Astyanax_mexicanus
ENSLACG00000001186	-	98	46.942	ENSCSEG00000010442	-	76	46.942	Cynoglossus_semilaevis
ENSLACG00000001186	-	96	40.557	ENSCVAG00000019870	-	93	42.363	Cyprinodon_variegatus
ENSLACG00000001186	-	64	30.932	ENSELUG00000022230	-	58	30.932	Esox_lucius
ENSLACG00000001186	-	68	40.430	ENSGAGG00000011063	-	96	44.776	Gopherus_agassizii
ENSLACG00000001186	-	55	30.090	ENSGAGG00000013650	-	79	30.090	Gopherus_agassizii
ENSLACG00000001186	-	96	40.795	ENSGAGG00000022002	-	83	40.172	Gopherus_agassizii
ENSLACG00000001186	-	83	40.189	ENSGAGG00000007173	-	100	40.000	Gopherus_agassizii
ENSLACG00000001186	-	76	36.207	ENSHCOG00000019997	-	88	43.326	Hippocampus_comes
ENSLACG00000001186	-	60	40.456	ENSIPUG00000003645	-	99	40.456	Ictalurus_punctatus
ENSLACG00000001186	-	73	30.631	ENSKMAG00000013568	-	60	30.631	Kryptolebias_marmoratus
ENSLACG00000001186	-	63	31.049	ENSKMAG00000003188	-	65	31.049	Kryptolebias_marmoratus
ENSLACG00000001186	-	78	45.074	ENSMAMG00000019918	-	99	45.424	Mastacembelus_armatus
ENSLACG00000001186	-	53	31.132	ENSORLG00000027231	-	81	31.132	Oryzias_latipes
ENSLACG00000001186	-	77	33.083	ENSORLG00000028879	-	53	33.083	Oryzias_latipes
ENSLACG00000001186	-	95	32.877	ENSORLG00000024164	-	52	31.105	Oryzias_latipes
ENSLACG00000001186	-	53	33.159	ENSORLG00000027869	-	83	33.159	Oryzias_latipes
ENSLACG00000001186	-	95	33.562	ENSORLG00000022583	-	52	31.250	Oryzias_latipes
ENSLACG00000001186	-	67	31.504	ENSORLG00000027443	-	83	31.504	Oryzias_latipes
ENSLACG00000001186	-	92	33.708	ENSORLG00020019030	-	72	33.708	Oryzias_latipes_hni
ENSLACG00000001186	-	50	32.020	ENSORLG00020016924	-	96	32.020	Oryzias_latipes_hni
ENSLACG00000001186	-	51	30.636	ENSORLG00020000154	-	84	37.283	Oryzias_latipes_hni
ENSLACG00000001186	-	95	31.206	ENSORLG00020021465	-	50	31.206	Oryzias_latipes_hni
ENSLACG00000001186	-	94	31.008	ENSORLG00020012971	-	51	31.008	Oryzias_latipes_hni
ENSLACG00000001186	-	64	32.877	ENSORLG00020009084	-	66	32.099	Oryzias_latipes_hni
ENSLACG00000001186	-	51	32.209	ENSORLG00020009127	-	67	34.971	Oryzias_latipes_hni
ENSLACG00000001186	-	73	30.548	ENSORLG00020002002	-	87	31.418	Oryzias_latipes_hni
ENSLACG00000001186	-	54	32.911	ENSORLG00015008138	-	75	32.911	Oryzias_latipes_hsok
ENSLACG00000001186	-	52	30.947	ENSORLG00015010510	-	70	30.947	Oryzias_latipes_hsok
ENSLACG00000001186	-	72	31.343	ENSORLG00015013369	-	68	31.343	Oryzias_latipes_hsok
ENSLACG00000001186	-	88	36.364	ENSORLG00015003846	-	61	36.364	Oryzias_latipes_hsok
ENSLACG00000001186	-	62	31.788	ENSORLG00015009803	-	94	31.788	Oryzias_latipes_hsok
ENSLACG00000001186	-	97	39.860	ENSOMEG00000005634	-	92	37.243	Oryzias_melastigma
ENSLACG00000001186	-	69	30.233	ENSOMEG00000013437	-	87	30.233	Oryzias_melastigma
ENSLACG00000001186	-	88	35.789	ENSOMEG00000017295	-	56	35.789	Oryzias_melastigma
ENSLACG00000001186	-	51	31.051	ENSPKIG00000007140	-	93	31.450	Paramormyrops_kingsleyae
ENSLACG00000001186	-	98	38.565	ENSPKIG00000013778	-	89	42.264	Paramormyrops_kingsleyae
ENSLACG00000001186	-	63	47.529	ENSPKIG00000015048	-	71	47.529	Paramormyrops_kingsleyae
ENSLACG00000001186	-	76	37.062	ENSPKIG00000005406	-	99	37.062	Paramormyrops_kingsleyae
ENSLACG00000001186	-	52	32.984	ENSPSIG00000001614	-	55	32.984	Pelodiscus_sinensis
ENSLACG00000001186	-	52	33.577	ENSPSIG00000001205	-	88	33.577	Pelodiscus_sinensis
ENSLACG00000001186	-	59	30.867	ENSPSIG00000001150	-	55	32.536	Pelodiscus_sinensis
ENSLACG00000001186	-	51	30.073	ENSPSIG00000000193	-	81	30.073	Pelodiscus_sinensis
ENSLACG00000001186	-	51	33.422	ENSPSIG00000000367	-	84	33.422	Pelodiscus_sinensis
ENSLACG00000001186	-	51	31.941	ENSPSIG00000001197	-	100	31.941	Pelodiscus_sinensis
ENSLACG00000001186	-	52	46.094	ENSPSIG00000000007	-	96	46.094	Pelodiscus_sinensis
ENSLACG00000001186	-	53	33.085	ENSPSIG00000001800	-	89	33.085	Pelodiscus_sinensis
ENSLACG00000001186	-	66	49.076	ENSPMEG00000017235	-	80	49.076	Poecilia_mexicana
ENSLACG00000001186	-	89	34.653	ENSPMEG00000005690	-	57	34.653	Poecilia_mexicana
ENSLACG00000001186	-	53	38.849	ENSPMEG00000019465	-	91	38.670	Poecilia_mexicana
ENSLACG00000001186	-	51	35.200	ENSPMEG00000018862	-	76	35.200	Poecilia_mexicana
ENSLACG00000001186	-	61	31.863	ENSPREG00000022349	-	87	35.714	Poecilia_reticulata
ENSLACG00000001186	-	58	46.943	ENSPNAG00000010299	-	91	46.943	Pygocentrus_nattereri
ENSLACG00000001186	-	61	37.980	ENSPNAG00000009058	-	99	37.980	Pygocentrus_nattereri
ENSLACG00000001186	-	68	33.400	ENSSDUG00000011043	-	62	33.400	Seriola_dumerili
ENSLACG00000001186	-	65	31.328	ENSSPAG00000008169	-	77	31.535	Stegastes_partitus
ENSLACG00000001186	-	63	49.898	ENSTRUG00000024803	-	95	49.898	Takifugu_rubripes
ENSLACG00000001186	-	55	35.577	ENSXMAG00000023507	-	71	35.577	Xiphophorus_maculatus
ENSLACG00000001186	-	61	31.469	ENSXMAG00000025957	-	80	30.152	Xiphophorus_maculatus