EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000001252 (Gene tree)
Gene ID: 102355634
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 15243 bases
Position: chrJH129734.1:13333-28575
Accession: 102355634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001396	Methyltransf_8	PF05148.15	8.4e-90	1	1
ENSLACP00000001395	Methyltransf_8	PF05148.15	1.4e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001407	-	2085	XM_006012265	ENSLACP00000001395	469 (aa)	-	H2ZVH4
ENSLACT00000001408	-	1167	-	ENSLACP00000001396	388 (aa)	-	H2ZVH5

Gene Model

Click here to download ENSLACG00000001252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001252	-	60	59.322	ENSG00000132275	RRP8	76	63.551	Homo_sapiens
ENSLACG00000001252	-	99	45.874	ENSAPOG00000008509	-	72	44.552	Acanthochromis_polyacanthus
ENSLACG00000001252	-	99	45.874	ENSAPOG00000010798	-	71	45.036	Acanthochromis_polyacanthus
ENSLACG00000001252	-	99	45.874	ENSAPOG00000010806	rrp8	71	45.036	Acanthochromis_polyacanthus
ENSLACG00000001252	-	57	61.161	ENSAMEG00000016307	RRP8	54	57.959	Ailuropoda_melanoleuca
ENSLACG00000001252	-	99	46.193	ENSACIG00000019896	rrp8	69	50.146	Amphilophus_citrinellus
ENSLACG00000001252	-	99	44.391	ENSAOCG00000008785	rrp8	72	44.258	Amphiprion_ocellaris
ENSLACG00000001252	-	88	44.028	ENSAPEG00000008416	rrp8	72	44.203	Amphiprion_percula
ENSLACG00000001252	-	90	44.125	ENSATEG00000014110	rrp8	60	47.353	Anabas_testudineus
ENSLACG00000001252	-	60	60.169	ENSANAG00000028524	RRP8	76	64.486	Aotus_nancymaae
ENSLACG00000001252	-	100	46.392	ENSAMXG00000005164	rrp8	73	45.876	Astyanax_mexicanus
ENSLACG00000001252	-	61	57.613	ENSBTAG00000000697	RRP8	53	57.613	Bos_taurus
ENSLACG00000001252	-	64	42.629	WBGene00020296	T07A9.8	69	42.629	Caenorhabditis_elegans
ENSLACG00000001252	-	60	59.746	ENSCJAG00000014012	RRP8	76	63.551	Callithrix_jacchus
ENSLACG00000001252	-	61	58.367	ENSCAFG00020009685	RRP8	54	58.367	Canis_lupus_dingo
ENSLACG00000001252	-	57	61.333	ENSCHIG00000019002	RRP8	50	58.367	Capra_hircus
ENSLACG00000001252	-	60	59.322	ENSTSYG00000003391	RRP8	76	64.486	Carlito_syrichta
ENSLACG00000001252	-	55	58.879	ENSCAPG00000013284	RRP8	54	58.879	Cavia_aperea
ENSLACG00000001252	-	65	57.312	ENSCPOG00000012515	RRP8	54	57.312	Cavia_porcellus
ENSLACG00000001252	-	59	60.345	ENSCCAG00000035197	RRP8	77	62.963	Cebus_capucinus
ENSLACG00000001252	-	57	61.435	ENSCATG00000029344	RRP8	76	63.551	Cercocebus_atys
ENSLACG00000001252	-	65	58.661	ENSCLAG00000016099	RRP8	54	58.893	Chinchilla_lanigera
ENSLACG00000001252	-	99	37.629	ENSCSAVG00000006435	-	59	51.477	Ciona_savignyi
ENSLACG00000001252	-	57	60.987	ENSCANG00000040771	RRP8	76	63.551	Colobus_angolensis_palliatus
ENSLACG00000001252	-	57	60.538	ENSCGRG00001003103	Rrp8	57	52.555	Cricetulus_griseus_chok1gshd
ENSLACG00000001252	-	61	58.403	ENSCGRG00000014009	Rrp8	52	58.403	Cricetulus_griseus_crigri
ENSLACG00000001252	-	97	45.939	ENSCSEG00000007330	rrp8	68	58.736	Cynoglossus_semilaevis
ENSLACG00000001252	-	99	45.843	ENSCVAG00000012032	rrp8	62	48.159	Cyprinodon_variegatus
ENSLACG00000001252	-	100	46.500	ENSDARG00000071652	rrp8	80	58.559	Danio_rerio
ENSLACG00000001252	-	64	58.000	ENSDORG00000000103	Rrp8	58	55.474	Dipodomys_ordii
ENSLACG00000001252	-	61	43.882	FBgn0034422	CG7137	70	43.529	Drosophila_melanogaster
ENSLACG00000001252	-	61	59.664	ENSETEG00000008877	RRP8	52	59.664	Echinops_telfairi
ENSLACG00000001252	-	57	61.883	ENSEASG00005001761	RRP8	76	64.486	Equus_asinus_asinus
ENSLACG00000001252	-	57	58.590	ENSFCAG00000015384	RRP8	76	64.486	Felis_catus
ENSLACG00000001252	-	55	60.930	ENSFDAG00000008872	RRP8	54	56.917	Fukomys_damarensis
ENSLACG00000001252	-	58	62.832	ENSGMOG00000007188	rrp8	98	47.632	Gadus_morhua
ENSLACG00000001252	-	82	44.543	ENSGAFG00000012331	rrp8	52	51.020	Gambusia_affinis
ENSLACG00000001252	-	99	46.512	ENSGACG00000011343	rrp8	93	45.478	Gasterosteus_aculeatus
ENSLACG00000001252	-	60	59.322	ENSGGOG00000000389	RRP8	76	63.551	Gorilla_gorilla
ENSLACG00000001252	-	65	57.647	ENSHGLG00000003980	RRP8	55	57.647	Heterocephalus_glaber_female
ENSLACG00000001252	-	65	57.647	ENSHGLG00100015659	RRP8	55	57.647	Heterocephalus_glaber_male
ENSLACG00000001252	-	99	49.616	ENSHCOG00000001293	rrp8	60	53.355	Hippocampus_comes
ENSLACG00000001252	-	64	58.400	ENSJJAG00000020608	-	54	58.400	Jaculus_jaculus
ENSLACG00000001252	-	99	47.129	ENSKMAG00000009229	rrp8	63	48.533	Kryptolebias_marmoratus
ENSLACG00000001252	-	69	58.052	ENSLBEG00000019937	rrp8	66	58.052	Labrus_bergylta
ENSLACG00000001252	-	57	53.182	ENSLOCG00000013776	-	90	50.862	Lepisosteus_oculatus
ENSLACG00000001252	-	61	59.664	ENSLAFG00000000112	RRP8	52	59.664	Loxodonta_africana
ENSLACG00000001252	-	57	61.435	ENSMFAG00000046084	RRP8	76	63.551	Macaca_fascicularis
ENSLACG00000001252	-	57	61.435	ENSMMUG00000007738	RRP8	76	63.551	Macaca_mulatta
ENSLACG00000001252	-	57	61.435	ENSMNEG00000029648	RRP8	76	63.551	Macaca_nemestrina
ENSLACG00000001252	-	57	61.435	ENSMLEG00000035110	RRP8	76	63.551	Mandrillus_leucophaeus
ENSLACG00000001252	-	64	56.627	ENSMAUG00000000324	Rrp8	53	56.627	Mesocricetus_auratus
ENSLACG00000001252	-	65	56.641	ENSMICG00000038472	RRP8	78	63.303	Microcebus_murinus
ENSLACG00000001252	-	64	57.600	ENSMOCG00000002486	Rrp8	53	57.600	Microtus_ochrogaster
ENSLACG00000001252	-	85	50.888	ENSMMOG00000015709	rrp8	63	50.888	Mola_mola
ENSLACG00000001252	-	99	46.009	ENSMALG00000015984	rrp8	73	44.208	Monopterus_albus
ENSLACG00000001252	-	65	55.686	MGP_CAROLIEiJ_G0030236	Rrp8	54	57.085	Mus_caroli
ENSLACG00000001252	-	64	56.800	ENSMUSG00000030888	Rrp8	54	56.855	Mus_musculus
ENSLACG00000001252	-	64	57.600	MGP_PahariEiJ_G0013451	Rrp8	53	57.600	Mus_pahari
ENSLACG00000001252	-	74	51.903	MGP_SPRETEiJ_G0031348	Rrp8	53	57.200	Mus_spretus
ENSLACG00000001252	-	61	58.367	ENSMPUG00000005510	RRP8	54	58.367	Mustela_putorius_furo
ENSLACG00000001252	-	64	58.000	ENSNGAG00000012450	Rrp8	53	58.000	Nannospalax_galili
ENSLACG00000001252	-	99	46.782	ENSNBRG00000023416	rrp8	77	64.151	Neolamprologus_brichardi
ENSLACG00000001252	-	60	59.322	ENSNLEG00000017445	RRP8	53	59.322	Nomascus_leucogenys
ENSLACG00000001252	-	57	56.502	ENSMEUG00000004945	-	84	56.502	Notamacropus_eugenii
ENSLACG00000001252	-	57	62.332	ENSOCUG00000027619	RRP8	50	62.332	Oryctolagus_cuniculus
ENSLACG00000001252	-	59	60.086	ENSOGAG00000007184	RRP8	51	60.086	Otolemur_garnettii
ENSLACG00000001252	-	60	59.322	ENSPPAG00000040792	RRP8	76	63.551	Pan_paniscus
ENSLACG00000001252	-	57	62.054	ENSPPRG00000022654	RRP8	76	64.486	Panthera_pardus
ENSLACG00000001252	-	57	62.054	ENSPTIG00000011321	RRP8	76	64.486	Panthera_tigris_altaica
ENSLACG00000001252	-	57	61.435	ENSPTRG00000003297	RRP8	76	63.551	Pan_troglodytes
ENSLACG00000001252	-	57	60.987	ENSPANG00000006537	RRP8	76	63.551	Papio_anubis
ENSLACG00000001252	-	64	56.800	ENSPEMG00000017257	Rrp8	54	56.800	Peromyscus_maniculatus_bairdii
ENSLACG00000001252	-	70	57.353	ENSPFOG00000007308	rrp8	85	44.153	Poecilia_formosa
ENSLACG00000001252	-	70	56.985	ENSPLAG00000011349	rrp8	85	43.347	Poecilia_latipinna
ENSLACG00000001252	-	99	48.403	ENSPMEG00000009888	rrp8	85	44.355	Poecilia_mexicana
ENSLACG00000001252	-	60	59.322	ENSPPYG00000003538	RRP8	52	59.322	Pongo_abelii
ENSLACG00000001252	-	57	61.435	ENSPCOG00000024627	RRP8	76	64.486	Propithecus_coquereli
ENSLACG00000001252	-	64	58.233	ENSPVAG00000002420	RRP8	53	58.233	Pteropus_vampyrus
ENSLACG00000001252	-	99	47.804	ENSPNYG00000002878	rrp8	56	53.398	Pundamilia_nyererei
ENSLACG00000001252	-	64	57.600	ENSRNOG00000018766	Rrp8	100	61.395	Rattus_norvegicus
ENSLACG00000001252	-	57	60.538	ENSRBIG00000044485	RRP8	76	62.617	Rhinopithecus_bieti
ENSLACG00000001252	-	57	60.538	ENSRROG00000045322	RRP8	76	62.617	Rhinopithecus_roxellana
ENSLACG00000001252	-	50	42.358	YDR083W	-	58	41.921	Saccharomyces_cerevisiae
ENSLACG00000001252	-	60	60.169	ENSSBOG00000035280	RRP8	76	64.486	Saimiri_boliviensis_boliviensis
ENSLACG00000001252	-	70	58.303	ENSSPAG00000006664	rrp8	83	63.478	Stegastes_partitus
ENSLACG00000001252	-	63	59.756	ENSSSCG00000023880	RRP8	54	58.893	Sus_scrofa
ENSLACG00000001252	-	56	58.036	ENSTGUG00000000591	RRP8	100	58.036	Taeniopygia_guttata
ENSLACG00000001252	-	67	56.705	ENSTBEG00000000237	RRP8	53	62.332	Tupaia_belangeri
ENSLACG00000001252	-	61	58.367	ENSTTRG00000004867	RRP8	53	58.367	Tursiops_truncatus
ENSLACG00000001252	-	61	57.959	ENSUAMG00000025756	RRP8	76	62.617	Ursus_americanus
ENSLACG00000001252	-	61	57.959	ENSUMAG00000000528	RRP8	51	57.959	Ursus_maritimus
ENSLACG00000001252	-	57	62.222	ENSVPAG00000008019	RRP8	55	57.937	Vicugna_pacos
ENSLACG00000001252	-	61	57.959	ENSVVUG00000024346	RRP8	56	57.959	Vulpes_vulpes
ENSLACG00000001252	-	70	55.515	ENSXCOG00000006156	rrp8	87	47.839	Xiphophorus_couchianus
ENSLACG00000001252	-	99	46.552	ENSXMAG00000005011	rrp8	54	55.474	Xiphophorus_maculatus