EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000001378 (Gene tree)
Gene ID: 102358920
Gene Symbol: pdcd4a
Alias: wu:fa55g03|wu:fb08a11|wu:fe01a02|zgc:66311
Full Name: programmed cell death protein 4-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 29957 bases
Position: chrJH129205.1:17485-47441
Accession: 102358920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001540	MA3	PF02847.17	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001553	-	1158	XM_006011215	ENSLACP00000001540	244 (aa)	-	H2ZVW9

Gene Model

Click here to download ENSLACG00000001378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001378's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001378	pdcd4a	88	57.014	ENSG00000150593	PDCD4	89	58.654	Homo_sapiens
ENSLACG00000001378	pdcd4a	86	76.389	ENSAMXG00000030253	pdcd4a	53	70.683	Astyanax_mexicanus
ENSLACG00000001378	pdcd4a	88	57.466	ENSCAFG00000010807	PDCD4	73	59.135	Canis_familiaris
ENSLACG00000001378	pdcd4a	100	65.462	ENSCSEG00000002907	pdcd4a	53	65.060	Cynoglossus_semilaevis
ENSLACG00000001378	pdcd4a	100	65.587	ENSCVAG00000003035	pdcd4a	53	65.587	Cyprinodon_variegatus
ENSLACG00000001378	pdcd4a	100	66.935	ENSDARG00000021702	pdcd4a	53	66.935	Danio_rerio
ENSLACG00000001378	pdcd4a	100	63.563	ENSELUG00000024343	pdcd4a	52	65.462	Esox_lucius
ENSLACG00000001378	pdcd4a	100	64.372	ENSGAFG00000005779	pdcd4a	57	64.372	Gambusia_affinis
ENSLACG00000001378	pdcd4a	88	57.466	ENSGGOG00000025550	PDCD4	71	59.135	Gorilla_gorilla
ENSLACG00000001378	pdcd4a	79	55.556	ENSHGLG00000001144	-	51	55.556	Heterocephalus_glaber_female
ENSLACG00000001378	pdcd4a	100	68.016	ENSLBEG00000020785	pdcd4a	52	68.016	Labrus_bergylta
ENSLACG00000001378	pdcd4a	83	59.135	ENSMFAG00000001786	PDCD4	70	59.135	Macaca_fascicularis
ENSLACG00000001378	pdcd4a	83	59.135	ENSMNEG00000043104	PDCD4	70	59.135	Macaca_nemestrina
ENSLACG00000001378	pdcd4a	88	57.466	ENSNLEG00000015556	PDCD4	74	59.135	Nomascus_leucogenys
ENSLACG00000001378	pdcd4a	100	65.041	ENSOMEG00000006883	pdcd4a	52	65.992	Oryzias_melastigma
ENSLACG00000001378	pdcd4a	88	57.466	ENSPPAG00000041002	PDCD4	72	59.135	Pan_paniscus
ENSLACG00000001378	pdcd4a	100	67.068	ENSPKIG00000017390	pdcd4a	52	66.397	Paramormyrops_kingsleyae
ENSLACG00000001378	pdcd4a	99	69.512	ENSSFOG00015017220	pdcd4a	52	68.699	Scleropages_formosus
ENSLACG00000001378	pdcd4a	100	52.800	ENSSSCG00000010627	PDCD4	50	59.135	Sus_scrofa
ENSLACG00000001378	pdcd4a	83	60.194	ENSTGUG00000015607	-	84	60.194	Taeniopygia_guttata
ENSLACG00000001378	pdcd4a	88	57.466	ENSUMAG00000023745	PDCD4	69	45.575	Ursus_maritimus
ENSLACG00000001378	pdcd4a	100	64.777	ENSXCOG00000011222	pdcd4a	53	63.158	Xiphophorus_couchianus