EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000001409 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 881 bases
Position: chrJH127894.1:18239-19119
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001579	Exo_endo_phos	PF03372.23	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001592	-	789	-	ENSLACP00000001579	263 (aa)	-	H2ZW08

Gene Model

Click here to download ENSLACG00000001409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000001409	-	95	80.769	ENSLACG00000011887	-	93	80.769
ENSLACG00000001409	-	97	84.644	ENSLACG00000012713	-	94	84.644
ENSLACG00000001409	-	95	67.050	ENSLACG00000014338	-	94	66.792
ENSLACG00000001409	-	87	87.446	ENSLACG00000012372	-	99	87.446
ENSLACG00000001409	-	97	85.768	ENSLACG00000000142	-	94	85.768

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001409	-	96	62.500	ENSACAG00000027999	-	91	62.500	Anolis_carolinensis
ENSLACG00000001409	-	97	58.052	ENSACAG00000022737	-	99	58.052	Anolis_carolinensis
ENSLACG00000001409	-	96	55.094	ENSACAG00000026078	-	92	55.094	Anolis_carolinensis
ENSLACG00000001409	-	97	59.551	ENSACAG00000022765	-	91	59.551	Anolis_carolinensis
ENSLACG00000001409	-	96	61.132	ENSACAG00000027606	-	100	61.132	Anolis_carolinensis
ENSLACG00000001409	-	96	57.795	ENSACAG00000026617	-	97	57.795	Anolis_carolinensis
ENSLACG00000001409	-	96	60.227	ENSACAG00000026622	-	100	60.227	Anolis_carolinensis
ENSLACG00000001409	-	97	57.678	ENSACAG00000024197	-	90	57.678	Anolis_carolinensis
ENSLACG00000001409	-	98	59.701	ENSACAG00000022555	-	91	59.701	Anolis_carolinensis
ENSLACG00000001409	-	95	57.634	ENSACAG00000023913	-	91	57.634	Anolis_carolinensis
ENSLACG00000001409	-	92	52.344	ENSCPBG00000013562	-	66	51.953	Chrysemys_picta_bellii
ENSLACG00000001409	-	95	54.406	ENSMODG00000024845	-	97	54.406	Monodelphis_domestica
ENSLACG00000001409	-	97	54.307	ENSMODG00000024905	-	93	54.307	Monodelphis_domestica
ENSLACG00000001409	-	97	57.977	ENSMODG00000024667	-	99	57.977	Monodelphis_domestica
ENSLACG00000001409	-	97	55.431	ENSMODG00000012913	-	95	55.431	Monodelphis_domestica
ENSLACG00000001409	-	98	50.000	ENSMODG00000024409	-	95	50.000	Monodelphis_domestica