EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000001515 (Gene tree)
Gene ID: 102357432
Gene Symbol: TRUB2
Alias: CLONE24922
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 9581 bases
Position: chrJH126767.1:20993-30573
Accession: 102357432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001692	TruB_N	PF01509.18	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001705	TRUB2-201	1032	XM_005994341	ENSLACP00000001692	337 (aa)	XP_005994403	H2ZWC1

Gene Model

Click here to download ENSLACG00000001515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001515's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001515	TRUB2	86	66.323	ENSG00000167112	TRUB2	88	66.323	Homo_sapiens
ENSLACG00000001515	TRUB2	61	55.610	ENSAPOG00000015733	trub2	74	55.610	Acanthochromis_polyacanthus
ENSLACG00000001515	TRUB2	85	43.056	ENSAPOG00000018284	-	80	58.779	Acanthochromis_polyacanthus
ENSLACG00000001515	TRUB2	85	63.986	ENSAMEG00000015395	TRUB2	86	63.986	Ailuropoda_melanoleuca
ENSLACG00000001515	TRUB2	85	53.125	ENSACIG00000016500	trub2	87	53.125	Amphilophus_citrinellus
ENSLACG00000001515	TRUB2	85	55.903	ENSAOCG00000002330	trub2	84	55.903	Amphiprion_ocellaris
ENSLACG00000001515	TRUB2	85	55.903	ENSAPEG00000013177	trub2	84	55.903	Amphiprion_percula
ENSLACG00000001515	TRUB2	85	54.138	ENSATEG00000011371	trub2	91	54.138	Anabas_testudineus
ENSLACG00000001515	TRUB2	84	65.385	ENSAPLG00000009254	TRUB2	93	65.385	Anas_platyrhynchos
ENSLACG00000001515	TRUB2	83	70.609	ENSACAG00000007331	TRUB2	85	70.609	Anolis_carolinensis
ENSLACG00000001515	TRUB2	86	64.605	ENSANAG00000036234	TRUB2	94	64.605	Aotus_nancymaae
ENSLACG00000001515	TRUB2	85	51.736	ENSACLG00000010793	trub2	87	51.736	Astatotilapia_calliptera
ENSLACG00000001515	TRUB2	95	50.625	ENSAMXG00000031679	trub2	91	50.625	Astyanax_mexicanus
ENSLACG00000001515	TRUB2	85	66.434	ENSCJAG00000020009	TRUB2	86	66.434	Callithrix_jacchus
ENSLACG00000001515	TRUB2	85	62.937	ENSCAFG00000020068	TRUB2	87	62.937	Canis_familiaris
ENSLACG00000001515	TRUB2	50	62.722	ENSCAFG00020017325	-	95	62.722	Canis_lupus_dingo
ENSLACG00000001515	TRUB2	85	65.734	ENSCHIG00000021160	TRUB2	86	65.734	Capra_hircus
ENSLACG00000001515	TRUB2	85	65.385	ENSTSYG00000034163	TRUB2	86	65.385	Carlito_syrichta
ENSLACG00000001515	TRUB2	76	62.646	ENSCAPG00000000223	TRUB2	89	62.143	Cavia_aperea
ENSLACG00000001515	TRUB2	85	62.937	ENSCPOG00000013535	TRUB2	87	62.722	Cavia_porcellus
ENSLACG00000001515	TRUB2	85	62.238	ENSCCAG00000028463	-	97	56.442	Cebus_capucinus
ENSLACG00000001515	TRUB2	86	64.261	ENSCCAG00000026531	-	89	64.261	Cebus_capucinus
ENSLACG00000001515	TRUB2	86	66.667	ENSCATG00000038234	TRUB2	88	66.667	Cercocebus_atys
ENSLACG00000001515	TRUB2	85	63.287	ENSCLAG00000001702	TRUB2	87	63.314	Chinchilla_lanigera
ENSLACG00000001515	TRUB2	86	63.014	ENSCSAG00000014117	TRUB2	88	63.014	Chlorocebus_sabaeus
ENSLACG00000001515	TRUB2	85	65.734	ENSCHOG00000001555	TRUB2	86	65.734	Choloepus_hoffmanni
ENSLACG00000001515	TRUB2	86	70.447	ENSCPBG00000025186	TRUB2	86	70.447	Chrysemys_picta_bellii
ENSLACG00000001515	TRUB2	85	38.567	ENSCSAVG00000003930	-	90	38.567	Ciona_savignyi
ENSLACG00000001515	TRUB2	86	59.794	ENSCANG00000016135	TRUB2	87	59.794	Colobus_angolensis_palliatus
ENSLACG00000001515	TRUB2	85	63.636	ENSCGRG00001024441	Trub2	91	62.130	Cricetulus_griseus_chok1gshd
ENSLACG00000001515	TRUB2	85	63.636	ENSCGRG00000005633	Trub2	86	63.636	Cricetulus_griseus_crigri
ENSLACG00000001515	TRUB2	85	54.483	ENSCSEG00000001331	trub2	86	54.483	Cynoglossus_semilaevis
ENSLACG00000001515	TRUB2	98	49.394	ENSCVAG00000009901	trub2	98	49.394	Cyprinodon_variegatus
ENSLACG00000001515	TRUB2	96	49.697	ENSDARG00000028379	trub2	94	49.697	Danio_rerio
ENSLACG00000001515	TRUB2	85	65.734	ENSDNOG00000045679	-	86	65.734	Dasypus_novemcinctus
ENSLACG00000001515	TRUB2	75	48.031	ENSDNOG00000043967	-	78	48.031	Dasypus_novemcinctus
ENSLACG00000001515	TRUB2	86	64.261	ENSDORG00000016222	Trub2	92	64.261	Dipodomys_ordii
ENSLACG00000001515	TRUB2	87	31.419	FBgn0033060	CG7849	93	31.419	Drosophila_melanogaster
ENSLACG00000001515	TRUB2	87	64.164	ENSETEG00000009114	TRUB2	91	64.164	Echinops_telfairi
ENSLACG00000001515	TRUB2	64	44.776	ENSEBUG00000015723	trub2	80	44.776	Eptatretus_burgeri
ENSLACG00000001515	TRUB2	87	63.481	ENSEASG00005016819	TRUB2	89	63.481	Equus_asinus_asinus
ENSLACG00000001515	TRUB2	87	64.164	ENSECAG00000023520	TRUB2	89	64.164	Equus_caballus
ENSLACG00000001515	TRUB2	93	59.502	ENSEEUG00000008908	TRUB2	98	59.502	Erinaceus_europaeus
ENSLACG00000001515	TRUB2	86	54.276	ENSELUG00000002376	trub2	95	54.276	Esox_lucius
ENSLACG00000001515	TRUB2	85	65.035	ENSFCAG00000005839	TRUB2	89	65.035	Felis_catus
ENSLACG00000001515	TRUB2	77	67.308	ENSFALG00000001364	TRUB2	84	68.077	Ficedula_albicollis
ENSLACG00000001515	TRUB2	85	62.937	ENSFDAG00000021374	TRUB2	87	63.905	Fukomys_damarensis
ENSLACG00000001515	TRUB2	97	45.872	ENSFHEG00000014655	trub2	97	45.872	Fundulus_heteroclitus
ENSLACG00000001515	TRUB2	83	46.595	ENSGMOG00000000981	trub2	93	46.595	Gadus_morhua
ENSLACG00000001515	TRUB2	85	66.899	ENSGALG00000004920	TRUB2	70	66.899	Gallus_gallus
ENSLACG00000001515	TRUB2	85	54.167	ENSGAFG00000010107	trub2	99	49.702	Gambusia_affinis
ENSLACG00000001515	TRUB2	85	55.903	ENSGACG00000001476	trub2	87	55.903	Gasterosteus_aculeatus
ENSLACG00000001515	TRUB2	86	71.134	ENSGAGG00000022872	TRUB2	86	71.134	Gopherus_agassizii
ENSLACG00000001515	TRUB2	86	65.979	ENSGGOG00000014780	TRUB2	88	65.979	Gorilla_gorilla
ENSLACG00000001515	TRUB2	85	52.083	ENSHBUG00000022384	trub2	87	52.083	Haplochromis_burtoni
ENSLACG00000001515	TRUB2	85	63.636	ENSHGLG00000016715	TRUB2	86	63.636	Heterocephalus_glaber_female
ENSLACG00000001515	TRUB2	85	63.636	ENSHGLG00100016548	TRUB2	86	63.636	Heterocephalus_glaber_male
ENSLACG00000001515	TRUB2	85	53.659	ENSHCOG00000017748	trub2	88	53.659	Hippocampus_comes
ENSLACG00000001515	TRUB2	85	55.556	ENSIPUG00000017725	hdhd3	50	55.556	Ictalurus_punctatus
ENSLACG00000001515	TRUB2	85	63.636	ENSSTOG00000022617	-	87	63.636	Ictidomys_tridecemlineatus
ENSLACG00000001515	TRUB2	85	63.636	ENSSTOG00000008024	-	87	63.905	Ictidomys_tridecemlineatus
ENSLACG00000001515	TRUB2	89	56.667	ENSJJAG00000019181	Trub2	89	56.667	Jaculus_jaculus
ENSLACG00000001515	TRUB2	85	54.355	ENSKMAG00000007861	trub2	86	54.355	Kryptolebias_marmoratus
ENSLACG00000001515	TRUB2	85	53.952	ENSLBEG00000000907	trub2	85	53.952	Labrus_bergylta
ENSLACG00000001515	TRUB2	83	63.929	ENSLOCG00000000885	trub2	92	63.929	Lepisosteus_oculatus
ENSLACG00000001515	TRUB2	85	65.035	ENSLAFG00000002174	TRUB2	94	65.035	Loxodonta_africana
ENSLACG00000001515	TRUB2	86	67.010	ENSMFAG00000000881	TRUB2	88	67.010	Macaca_fascicularis
ENSLACG00000001515	TRUB2	86	67.010	ENSMMUG00000014146	TRUB2	88	67.010	Macaca_mulatta
ENSLACG00000001515	TRUB2	86	66.667	ENSMNEG00000011189	TRUB2	88	66.667	Macaca_nemestrina
ENSLACG00000001515	TRUB2	86	67.010	ENSMLEG00000037270	TRUB2	88	67.010	Mandrillus_leucophaeus
ENSLACG00000001515	TRUB2	85	56.897	ENSMAMG00000023643	trub2	95	56.897	Mastacembelus_armatus
ENSLACG00000001515	TRUB2	85	52.083	ENSMZEG00005016018	trub2	87	52.083	Maylandia_zebra
ENSLACG00000001515	TRUB2	58	72.308	ENSMGAG00000003894	TRUB2	98	72.308	Meleagris_gallopavo
ENSLACG00000001515	TRUB2	85	63.986	ENSMAUG00000010403	Trub2	86	63.986	Mesocricetus_auratus
ENSLACG00000001515	TRUB2	85	64.685	ENSMICG00000047032	TRUB2	86	64.685	Microcebus_murinus
ENSLACG00000001515	TRUB2	85	63.287	ENSMOCG00000014291	Trub2	94	63.287	Microtus_ochrogaster
ENSLACG00000001515	TRUB2	93	50.949	ENSMMOG00000021674	trub2	97	50.949	Mola_mola
ENSLACG00000001515	TRUB2	87	63.823	ENSMODG00000005940	TRUB2	99	63.823	Monodelphis_domestica
ENSLACG00000001515	TRUB2	85	55.670	ENSMALG00000021231	trub2	86	55.670	Monopterus_albus
ENSLACG00000001515	TRUB2	87	63.140	MGP_CAROLIEiJ_G0023368	Trub2	89	63.140	Mus_caroli
ENSLACG00000001515	TRUB2	87	63.823	ENSMUSG00000039826	Trub2	89	63.823	Mus_musculus
ENSLACG00000001515	TRUB2	87	62.457	MGP_PahariEiJ_G0024826	Trub2	89	62.457	Mus_pahari
ENSLACG00000001515	TRUB2	87	63.481	MGP_SPRETEiJ_G0024286	Trub2	89	63.481	Mus_spretus
ENSLACG00000001515	TRUB2	85	62.587	ENSMPUG00000013206	TRUB2	78	62.587	Mustela_putorius_furo
ENSLACG00000001515	TRUB2	85	66.783	ENSMLUG00000005256	TRUB2	86	66.783	Myotis_lucifugus
ENSLACG00000001515	TRUB2	85	63.986	ENSNGAG00000018679	Trub2	87	63.986	Nannospalax_galili
ENSLACG00000001515	TRUB2	85	52.941	ENSNBRG00000016294	trub2	87	52.941	Neolamprologus_brichardi
ENSLACG00000001515	TRUB2	86	64.948	ENSNLEG00000017556	TRUB2	88	64.948	Nomascus_leucogenys
ENSLACG00000001515	TRUB2	85	67.944	ENSMEUG00000000484	TRUB2	93	67.944	Notamacropus_eugenii
ENSLACG00000001515	TRUB2	85	63.287	ENSOPRG00000001981	TRUB2	87	63.287	Ochotona_princeps
ENSLACG00000001515	TRUB2	85	63.287	ENSODEG00000017292	TRUB2	88	63.287	Octodon_degus
ENSLACG00000001515	TRUB2	85	51.389	ENSONIG00000004230	trub2	87	51.389	Oreochromis_niloticus
ENSLACG00000001515	TRUB2	55	65.591	ENSOANG00000029023	-	83	65.591	Ornithorhynchus_anatinus
ENSLACG00000001515	TRUB2	85	63.287	ENSOCUG00000026296	TRUB2	78	63.287	Oryctolagus_cuniculus
ENSLACG00000001515	TRUB2	83	56.184	ENSORLG00000020011	trub2	84	56.429	Oryzias_latipes
ENSLACG00000001515	TRUB2	84	56.028	ENSORLG00020011028	trub2	83	56.028	Oryzias_latipes_hni
ENSLACG00000001515	TRUB2	84	54.610	ENSORLG00015007494	trub2	86	56.028	Oryzias_latipes_hsok
ENSLACG00000001515	TRUB2	91	53.698	ENSOMEG00000006702	trub2	95	53.698	Oryzias_melastigma
ENSLACG00000001515	TRUB2	87	65.188	ENSOARG00000010579	-	89	65.188	Ovis_aries
ENSLACG00000001515	TRUB2	60	68.317	ENSOARG00000003785	-	87	66.055	Ovis_aries
ENSLACG00000001515	TRUB2	86	66.667	ENSPPAG00000043146	TRUB2	88	66.667	Pan_paniscus
ENSLACG00000001515	TRUB2	85	65.035	ENSPPRG00000006307	TRUB2	89	65.035	Panthera_pardus
ENSLACG00000001515	TRUB2	85	65.385	ENSPTIG00000012366	TRUB2	89	65.385	Panthera_tigris_altaica
ENSLACG00000001515	TRUB2	86	66.323	ENSPTRG00000021423	TRUB2	88	66.323	Pan_troglodytes
ENSLACG00000001515	TRUB2	86	66.323	ENSPTRG00000052151	-	88	66.323	Pan_troglodytes
ENSLACG00000001515	TRUB2	86	67.010	ENSPANG00000025856	TRUB2	88	67.010	Papio_anubis
ENSLACG00000001515	TRUB2	85	55.903	ENSPKIG00000019769	trub2	94	55.903	Paramormyrops_kingsleyae
ENSLACG00000001515	TRUB2	86	64.505	ENSPSIG00000015701	TRUB2	97	64.505	Pelodiscus_sinensis
ENSLACG00000001515	TRUB2	84	54.545	ENSPMGG00000010206	trub2	90	54.545	Periophthalmus_magnuspinnatus
ENSLACG00000001515	TRUB2	85	62.369	ENSPEMG00000017893	Trub2	91	61.765	Peromyscus_maniculatus_bairdii
ENSLACG00000001515	TRUB2	85	67.133	ENSPCIG00000026731	TRUB2	92	67.133	Phascolarctos_cinereus
ENSLACG00000001515	TRUB2	82	55.235	ENSPFOG00000018018	trub2	85	50.926	Poecilia_formosa
ENSLACG00000001515	TRUB2	82	55.235	ENSPLAG00000010484	trub2	93	50.926	Poecilia_latipinna
ENSLACG00000001515	TRUB2	99	49.254	ENSPMEG00000012913	trub2	99	49.254	Poecilia_mexicana
ENSLACG00000001515	TRUB2	99	48.673	ENSPREG00000002549	trub2	99	48.968	Poecilia_reticulata
ENSLACG00000001515	TRUB2	97	58.896	ENSPPYG00000019650	TRUB2	98	58.896	Pongo_abelii
ENSLACG00000001515	TRUB2	85	65.385	ENSPCAG00000015068	TRUB2	87	65.385	Procavia_capensis
ENSLACG00000001515	TRUB2	85	64.336	ENSPCOG00000017100	TRUB2	86	64.336	Propithecus_coquereli
ENSLACG00000001515	TRUB2	80	66.171	ENSPVAG00000001224	TRUB2	90	66.171	Pteropus_vampyrus
ENSLACG00000001515	TRUB2	85	52.083	ENSPNYG00000013666	trub2	87	52.083	Pundamilia_nyererei
ENSLACG00000001515	TRUB2	99	51.176	ENSPNAG00000017292	trub2	95	51.176	Pygocentrus_nattereri
ENSLACG00000001515	TRUB2	86	61.017	ENSRNOG00000043189	Trub2	91	61.017	Rattus_norvegicus
ENSLACG00000001515	TRUB2	86	59.794	ENSRBIG00000006965	TRUB2	87	59.794	Rhinopithecus_bieti
ENSLACG00000001515	TRUB2	86	66.323	ENSRROG00000042928	TRUB2	88	66.323	Rhinopithecus_roxellana
ENSLACG00000001515	TRUB2	85	64.685	ENSSBOG00000022439	TRUB2	86	64.685	Saimiri_boliviensis_boliviensis
ENSLACG00000001515	TRUB2	83	59.717	ENSSFOG00015013391	trub2	91	59.717	Scleropages_formosus
ENSLACG00000001515	TRUB2	96	50.920	ENSSMAG00000020820	trub2	99	50.920	Scophthalmus_maximus
ENSLACG00000001515	TRUB2	83	53.214	ENSSDUG00000016928	trub2	84	53.214	Seriola_dumerili
ENSLACG00000001515	TRUB2	83	52.857	ENSSLDG00000024701	trub2	84	52.857	Seriola_lalandi_dorsalis
ENSLACG00000001515	TRUB2	95	63.750	ENSSPUG00000015515	TRUB2	95	63.750	Sphenodon_punctatus
ENSLACG00000001515	TRUB2	85	56.597	ENSSPAG00000017865	trub2	87	56.597	Stegastes_partitus
ENSLACG00000001515	TRUB2	85	66.434	ENSSSCG00000005645	TRUB2	87	66.148	Sus_scrofa
ENSLACG00000001515	TRUB2	76	69.261	ENSTGUG00000003704	TRUB2	98	69.261	Taeniopygia_guttata
ENSLACG00000001515	TRUB2	82	51.613	ENSTRUG00000015499	trub2	85	51.613	Takifugu_rubripes
ENSLACG00000001515	TRUB2	85	52.069	ENSTNIG00000014721	trub2	98	52.069	Tetraodon_nigroviridis
ENSLACG00000001515	TRUB2	56	65.957	ENSTBEG00000000586	TRUB2	84	65.957	Tupaia_belangeri
ENSLACG00000001515	TRUB2	85	61.888	ENSTTRG00000016486	TRUB2	87	61.888	Tursiops_truncatus
ENSLACG00000001515	TRUB2	85	62.937	ENSUAMG00000020276	TRUB2	84	62.937	Ursus_americanus
ENSLACG00000001515	TRUB2	85	63.287	ENSUMAG00000022051	TRUB2	84	63.287	Ursus_maritimus
ENSLACG00000001515	TRUB2	87	49.488	ENSVPAG00000005793	TRUB2	92	49.488	Vicugna_pacos
ENSLACG00000001515	TRUB2	85	62.937	ENSVVUG00000013451	TRUB2	82	62.937	Vulpes_vulpes
ENSLACG00000001515	TRUB2	85	65.157	ENSXETG00000003973	trub2	88	65.157	Xenopus_tropicalis
ENSLACG00000001515	TRUB2	99	47.917	ENSXCOG00000008759	trub2	99	48.512	Xiphophorus_couchianus
ENSLACG00000001515	TRUB2	99	47.917	ENSXMAG00000015478	trub2	99	48.512	Xiphophorus_maculatus