EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000001532 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-41e3.7
Alias: -
Full Name: protein FAM172A pseudogene
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1071 bases
Position: chrJH127915.1:21575-22645
Accession: 102353313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001711	Arb2	PF09757.9	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001724	-	1071	XM_006006499	ENSLACP00000001711	357 (aa)	-	H2ZWE0

Gene Model

Click here to download ENSLACG00000001532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001532	si:ch73-41e3.7	100	46.950	ENSG00000113391	FAM172A	98	47.671	Homo_sapiens
ENSLACG00000001532	si:ch73-41e3.7	96	47.139	ENSAPLG00000004055	FAM172A	88	47.139	Anas_platyrhynchos
ENSLACG00000001532	si:ch73-41e3.7	61	50.685	ENSAPLG00000011555	-	99	50.685	Anas_platyrhynchos
ENSLACG00000001532	si:ch73-41e3.7	88	47.447	ENSACAG00000013305	FAM172A	86	47.447	Anolis_carolinensis
ENSLACG00000001532	si:ch73-41e3.7	82	47.604	ENSANAG00000035869	FAM172A	82	47.742	Aotus_nancymaae
ENSLACG00000001532	si:ch73-41e3.7	92	48.851	ENSBTAG00000050195	FAM172A	83	48.851	Bos_taurus
ENSLACG00000001532	si:ch73-41e3.7	100	47.480	ENSCJAG00000010444	FAM172A	90	47.480	Callithrix_jacchus
ENSLACG00000001532	si:ch73-41e3.7	87	49.240	ENSCAFG00000008064	FAM172A	88	49.240	Canis_familiaris
ENSLACG00000001532	si:ch73-41e3.7	92	49.138	ENSCAFG00020006210	FAM172A	94	48.106	Canis_lupus_dingo
ENSLACG00000001532	si:ch73-41e3.7	100	47.368	ENSCHIG00000008440	FAM172A	90	47.368	Capra_hircus
ENSLACG00000001532	si:ch73-41e3.7	69	47.940	ENSTSYG00000006286	FAM172A	85	47.940	Carlito_syrichta
ENSLACG00000001532	si:ch73-41e3.7	100	47.480	ENSCCAG00000023116	FAM172A	98	48.219	Cebus_capucinus
ENSLACG00000001532	si:ch73-41e3.7	88	48.348	ENSCLAG00000005472	FAM172A	86	48.348	Chinchilla_lanigera
ENSLACG00000001532	si:ch73-41e3.7	99	51.549	ENSCPBG00000004402	-	97	51.549	Chrysemys_picta_bellii
ENSLACG00000001532	si:ch73-41e3.7	71	48.339	ENSCANG00000040412	FAM172A	92	48.339	Colobus_angolensis_palliatus
ENSLACG00000001532	si:ch73-41e3.7	100	47.480	ENSDNOG00000004689	FAM172A	90	47.480	Dasypus_novemcinctus
ENSLACG00000001532	si:ch73-41e3.7	71	48.339	ENSDORG00000013558	Fam172a	88	48.339	Dipodomys_ordii
ENSLACG00000001532	si:ch73-41e3.7	89	35.110	ENSEBUG00000016097	-	63	35.110	Eptatretus_burgeri
ENSLACG00000001532	si:ch73-41e3.7	92	49.425	ENSECAG00000018274	FAM172A	87	49.390	Equus_caballus
ENSLACG00000001532	si:ch73-41e3.7	81	47.727	ENSEEUG00000002887	FAM172A	74	47.727	Erinaceus_europaeus
ENSLACG00000001532	si:ch73-41e3.7	94	47.578	ENSELUG00000017647	fam172a	84	47.578	Esox_lucius
ENSLACG00000001532	si:ch73-41e3.7	92	49.138	ENSFCAG00000025443	FAM172A	83	49.138	Felis_catus
ENSLACG00000001532	si:ch73-41e3.7	87	47.273	ENSFALG00000009072	FAM172A	88	47.273	Ficedula_albicollis
ENSLACG00000001532	si:ch73-41e3.7	95	52.339	ENSFALG00000006501	-	100	52.339	Ficedula_albicollis
ENSLACG00000001532	si:ch73-41e3.7	96	48.229	ENSGALG00000014661	FAM172A	88	48.229	Gallus_gallus
ENSLACG00000001532	si:ch73-41e3.7	99	52.113	ENSGAGG00000022828	-	98	52.113	Gopherus_agassizii
ENSLACG00000001532	si:ch73-41e3.7	92	49.138	ENSGAGG00000003839	FAM172A	83	49.138	Gopherus_agassizii
ENSLACG00000001532	si:ch73-41e3.7	100	47.215	ENSGGOG00000010296	FAM172A	92	48.339	Gorilla_gorilla
ENSLACG00000001532	si:ch73-41e3.7	97	47.554	ENSHGLG00000011178	FAM172A	88	47.554	Heterocephalus_glaber_female
ENSLACG00000001532	si:ch73-41e3.7	86	48.780	ENSHGLG00100013340	FAM172A	97	40.803	Heterocephalus_glaber_male
ENSLACG00000001532	si:ch73-41e3.7	92	48.851	ENSSTOG00000009918	FAM172A	83	48.851	Ictidomys_tridecemlineatus
ENSLACG00000001532	si:ch73-41e3.7	95	48.169	ENSLOCG00000001629	fam172a	86	48.732	Lepisosteus_oculatus
ENSLACG00000001532	si:ch73-41e3.7	71	48.339	ENSMFAG00000001171	FAM172A	92	48.339	Macaca_fascicularis
ENSLACG00000001532	si:ch73-41e3.7	96	47.684	ENSMNEG00000039938	FAM172A	92	48.339	Macaca_nemestrina
ENSLACG00000001532	si:ch73-41e3.7	60	46.759	ENSMGAG00000016079	-	95	46.759	Meleagris_gallopavo
ENSLACG00000001532	si:ch73-41e3.7	92	49.138	ENSMICG00000030403	FAM172A	87	48.148	Microcebus_murinus
ENSLACG00000001532	si:ch73-41e3.7	93	48.732	ENSMOCG00000003613	Fam172a	96	48.732	Microtus_ochrogaster
ENSLACG00000001532	si:ch73-41e3.7	89	48.657	ENSMODG00000020131	FAM172A	81	48.657	Monodelphis_domestica
ENSLACG00000001532	si:ch73-41e3.7	97	39.595	MGP_PahariEiJ_G0015818	Fam172a	97	39.595	Mus_pahari
ENSLACG00000001532	si:ch73-41e3.7	93	48.451	ENSNGAG00000019570	Fam172a	96	48.451	Nannospalax_galili
ENSLACG00000001532	si:ch73-41e3.7	71	48.339	ENSNLEG00000013903	FAM172A	89	48.339	Nomascus_leucogenys
ENSLACG00000001532	si:ch73-41e3.7	87	47.256	ENSOANG00000011068	FAM172A	88	47.256	Ornithorhynchus_anatinus
ENSLACG00000001532	si:ch73-41e3.7	92	49.425	ENSOCUG00000007299	FAM172A	82	49.425	Oryctolagus_cuniculus
ENSLACG00000001532	si:ch73-41e3.7	100	48.011	ENSOGAG00000015189	FAM172A	90	48.011	Otolemur_garnettii
ENSLACG00000001532	si:ch73-41e3.7	86	48.780	ENSOARG00000016711	FAM172A	75	48.780	Ovis_aries
ENSLACG00000001532	si:ch73-41e3.7	71	48.339	ENSPPAG00000030542	FAM172A	92	48.339	Pan_paniscus
ENSLACG00000001532	si:ch73-41e3.7	92	49.138	ENSPPRG00000006653	FAM172A	83	49.138	Panthera_pardus
ENSLACG00000001532	si:ch73-41e3.7	92	49.138	ENSPTIG00000012681	FAM172A	83	49.138	Panthera_tigris_altaica
ENSLACG00000001532	si:ch73-41e3.7	71	48.339	ENSPTRG00000017074	FAM172A	92	48.339	Pan_troglodytes
ENSLACG00000001532	si:ch73-41e3.7	71	48.339	ENSPANG00000011687	FAM172A	92	48.339	Papio_anubis
ENSLACG00000001532	si:ch73-41e3.7	94	46.499	ENSPKIG00000012314	fam172a	92	47.222	Paramormyrops_kingsleyae
ENSLACG00000001532	si:ch73-41e3.7	96	48.087	ENSPEMG00000009604	-	88	48.087	Peromyscus_maniculatus_bairdii
ENSLACG00000001532	si:ch73-41e3.7	92	48.127	ENSPCIG00000028612	FAM172A	83	48.127	Phascolarctos_cinereus
ENSLACG00000001532	si:ch73-41e3.7	52	43.842	ENSPCOG00000024072	FAM172A	82	43.842	Propithecus_coquereli
ENSLACG00000001532	si:ch73-41e3.7	70	48.148	ENSRNOG00000013844	Fam172a	99	48.148	Rattus_norvegicus
ENSLACG00000001532	si:ch73-41e3.7	71	48.339	ENSRROG00000023807	FAM172A	92	48.339	Rhinopithecus_roxellana
ENSLACG00000001532	si:ch73-41e3.7	100	47.480	ENSSBOG00000019860	FAM172A	90	47.480	Saimiri_boliviensis_boliviensis
ENSLACG00000001532	si:ch73-41e3.7	92	47.550	ENSSHAG00000013743	FAM172A	83	47.550	Sarcophilus_harrisii
ENSLACG00000001532	si:ch73-41e3.7	96	47.411	ENSSPUG00000008161	FAM172A	88	47.411	Sphenodon_punctatus
ENSLACG00000001532	si:ch73-41e3.7	92	49.138	ENSSSCG00000027608	FAM172A	91	50.000	Sus_scrofa
ENSLACG00000001532	si:ch73-41e3.7	93	49.853	ENSTGUG00000013623	-	99	49.853	Taeniopygia_guttata
ENSLACG00000001532	si:ch73-41e3.7	96	46.049	ENSTGUG00000000715	FAM172A	96	46.049	Taeniopygia_guttata
ENSLACG00000001532	si:ch73-41e3.7	76	38.983	ENSTNIG00000009902	fam172a	89	38.983	Tetraodon_nigroviridis
ENSLACG00000001532	si:ch73-41e3.7	97	46.467	ENSTTRG00000001521	FAM172A	88	46.467	Tursiops_truncatus
ENSLACG00000001532	si:ch73-41e3.7	92	49.138	ENSUMAG00000005442	FAM172A	88	49.096	Ursus_maritimus
ENSLACG00000001532	si:ch73-41e3.7	92	49.138	ENSVVUG00000022112	FAM172A	87	49.547	Vulpes_vulpes
ENSLACG00000001532	si:ch73-41e3.7	96	45.799	ENSXETG00000011592	fam172a	87	45.799	Xenopus_tropicalis
ENSLACG00000001532	si:ch73-41e3.7	96	50.144	ENSXETG00000033027	-	94	50.144	Xenopus_tropicalis