EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000001539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1511 bases
Position: chrJH131080.1:21853-23363
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001721	RVT_1	PF00078.27	5.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001734	-	1482	-	ENSLACP00000001721	494 (aa)	-	H2ZWF0

Gene Model

Click here to download ENSLACG00000001539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000001539	-	99	84.569	ENSLACG00000006107	-	79	84.569
ENSLACG00000001539	-	93	75.906	ENSLACG00000013633	-	87	75.906
ENSLACG00000001539	-	98	34.818	ENSLACG00000012911	-	72	34.818
ENSLACG00000001539	-	95	83.686	ENSLACG00000016962	-	82	83.686
ENSLACG00000001539	-	68	34.971	ENSLACG00000001271	-	66	35.258
ENSLACG00000001539	-	92	64.440	ENSLACG00000005758	-	86	64.440
ENSLACG00000001539	-	99	38.664	ENSLACG00000004832	-	84	38.664
ENSLACG00000001539	-	98	52.410	ENSLACG00000012377	-	52	52.410
ENSLACG00000001539	-	98	32.535	ENSLACG00000004233	-	73	32.535
ENSLACG00000001539	-	83	33.641	ENSLACG00000013644	-	54	33.641

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001539	-	99	31.275	ENSACLG00000025178	-	52	31.474	Astatotilapia_calliptera
ENSLACG00000001539	-	99	31.275	ENSACLG00000004963	-	63	31.474	Astatotilapia_calliptera
ENSLACG00000001539	-	99	31.474	ENSACLG00000021406	-	56	31.673	Astatotilapia_calliptera
ENSLACG00000001539	-	99	31.474	ENSACLG00000017721	-	62	31.673	Astatotilapia_calliptera
ENSLACG00000001539	-	99	31.673	ENSACLG00000018006	-	52	31.873	Astatotilapia_calliptera
ENSLACG00000001539	-	91	31.169	ENSACLG00000021830	-	52	31.681	Astatotilapia_calliptera
ENSLACG00000001539	-	99	31.275	ENSACLG00000005419	-	62	31.474	Astatotilapia_calliptera
ENSLACG00000001539	-	99	31.076	ENSACLG00000013139	-	55	31.275	Astatotilapia_calliptera
ENSLACG00000001539	-	99	31.474	ENSACLG00000006057	-	63	31.873	Astatotilapia_calliptera
ENSLACG00000001539	-	99	31.474	ENSACLG00000013574	-	51	31.673	Astatotilapia_calliptera
ENSLACG00000001539	-	99	31.275	ENSACLG00000009148	-	52	31.746	Astatotilapia_calliptera
ENSLACG00000001539	-	99	30.709	ENSORLG00000025660	-	58	30.906	Oryzias_latipes
ENSLACG00000001539	-	99	31.299	ENSORLG00000027125	-	55	31.496	Oryzias_latipes
ENSLACG00000001539	-	99	31.496	ENSORLG00000028072	-	55	31.496	Oryzias_latipes
ENSLACG00000001539	-	99	31.496	ENSORLG00000023099	-	52	31.693	Oryzias_latipes
ENSLACG00000001539	-	87	31.250	ENSORLG00000023528	-	56	31.277	Oryzias_latipes
ENSLACG00000001539	-	99	30.739	ENSORLG00000022216	-	58	31.225	Oryzias_latipes
ENSLACG00000001539	-	99	31.299	ENSORLG00020020895	-	55	31.299	Oryzias_latipes_hni
ENSLACG00000001539	-	99	30.906	ENSORLG00020020703	-	55	31.102	Oryzias_latipes_hni
ENSLACG00000001539	-	99	30.648	ENSORLG00020006197	-	58	30.845	Oryzias_latipes_hni
ENSLACG00000001539	-	99	32.271	ENSXMAG00000021428	-	57	32.470	Xiphophorus_maculatus