EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000001569 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 223552 bases
Position: chrJH127814.1:22907-246458
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001756	HRDC	PF00570.23	1e-11	1	1
ENSLACP00000001756	DEAD	PF00270.29	1.4e-11	1	1
ENSLACP00000001756	DNA_pol_A_exo1	PF01612.20	2.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000001769	-	4911	-	ENSLACP00000001756	1469 (aa)	-	H2ZWI5

Gene Model

Click here to download ENSLACG00000001569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001569	-	93	50.071	ENSG00000165392	WRN	97	49.929	Homo_sapiens
ENSLACG00000001569	-	69	58.467	ENSAMEG00000000475	-	84	58.588	Ailuropoda_melanoleuca
ENSLACG00000001569	-	98	49.322	ENSAPLG00000001616	WRN	100	49.423	Anas_platyrhynchos
ENSLACG00000001569	-	90	49.706	ENSACAG00000003109	WRN	99	49.485	Anolis_carolinensis
ENSLACG00000001569	-	87	51.126	ENSANAG00000032806	WRN	97	51.014	Aotus_nancymaae
ENSLACG00000001569	-	98	47.174	ENSAMXG00000010066	wrn	99	47.512	Astyanax_mexicanus
ENSLACG00000001569	-	93	50.106	ENSBTAG00000021592	WRN	96	49.965	Bos_taurus
ENSLACG00000001569	-	55	32.326	WBGene00006944	wrn-1	76	32.550	Caenorhabditis_elegans
ENSLACG00000001569	-	90	50.790	ENSCJAG00000012511	WRN	94	50.613	Callithrix_jacchus
ENSLACG00000001569	-	99	49.008	ENSCAFG00000006410	WRN	99	51.129	Canis_familiaris
ENSLACG00000001569	-	90	50.799	ENSCAFG00020001236	WRN	94	50.872	Canis_lupus_dingo
ENSLACG00000001569	-	93	50.783	ENSCHIG00000014991	WRN	96	50.606	Capra_hircus
ENSLACG00000001569	-	90	50.361	ENSTSYG00000012689	WRN	94	50.399	Carlito_syrichta
ENSLACG00000001569	-	79	60.949	ENSCAPG00000016803	WRN	94	51.791	Cavia_aperea
ENSLACG00000001569	-	99	49.735	ENSCPOG00000002943	WRN	98	49.206	Cavia_porcellus
ENSLACG00000001569	-	90	50.720	ENSCCAG00000023793	WRN	94	50.542	Cebus_capucinus
ENSLACG00000001569	-	90	50.764	ENSCATG00000040557	WRN	97	49.929	Cercocebus_atys
ENSLACG00000001569	-	99	49.205	ENSCLAG00000000817	WRN	99	48.848	Chinchilla_lanigera
ENSLACG00000001569	-	90	50.651	ENSCSAG00000015810	WRN	96	50.472	Chlorocebus_sabaeus
ENSLACG00000001569	-	54	67.480	ENSCHOG00000008966	WRN	60	67.769	Choloepus_hoffmanni
ENSLACG00000001569	-	99	52.638	ENSCPBG00000013421	WRN	99	52.381	Chrysemys_picta_bellii
ENSLACG00000001569	-	55	41.260	ENSCING00000002232	-	68	41.617	Ciona_intestinalis
ENSLACG00000001569	-	91	50.217	ENSCANG00000037137	WRN	94	49.891	Colobus_angolensis_palliatus
ENSLACG00000001569	-	93	49.713	ENSCGRG00001016491	Wrn	96	49.539	Cricetulus_griseus_chok1gshd
ENSLACG00000001569	-	75	49.738	ENSCGRG00000016821	Wrn	96	49.525	Cricetulus_griseus_crigri
ENSLACG00000001569	-	99	46.460	ENSDARG00000098211	wrn	99	46.730	Danio_rerio
ENSLACG00000001569	-	95	50.139	ENSDNOG00000008481	WRN	99	49.965	Dasypus_novemcinctus
ENSLACG00000001569	-	90	50.290	ENSDORG00000002696	Wrn	99	47.688	Dipodomys_ordii
ENSLACG00000001569	-	72	53.695	ENSETEG00000019854	WRN	66	56.271	Echinops_telfairi
ENSLACG00000001569	-	90	48.795	ENSEASG00005016813	WRN	90	69.906	Equus_asinus_asinus
ENSLACG00000001569	-	99	48.306	ENSECAG00000000110	WRN	99	47.812	Equus_caballus
ENSLACG00000001569	-	71	60.588	ENSEEUG00000004926	WRN	83	60.714	Erinaceus_europaeus
ENSLACG00000001569	-	99	44.164	ENSELUG00000017817	wrn	97	51.389	Esox_lucius
ENSLACG00000001569	-	91	49.347	ENSFCAG00000024759	WRN	94	48.911	Felis_catus
ENSLACG00000001569	-	99	49.801	ENSFDAG00000008637	WRN	99	49.273	Fukomys_damarensis
ENSLACG00000001569	-	98	49.133	ENSGALG00000040909	WRN	97	48.932	Gallus_gallus
ENSLACG00000001569	-	99	53.720	ENSGAGG00000022647	WRN	99	53.329	Gopherus_agassizii
ENSLACG00000001569	-	91	50.980	ENSGGOG00000022154	WRN	89	58.068	Gorilla_gorilla
ENSLACG00000001569	-	93	50.248	ENSHGLG00000003638	WRN	97	50.177	Heterocephalus_glaber_female
ENSLACG00000001569	-	98	47.159	ENSIPUG00000002090	wrn	99	46.995	Ictalurus_punctatus
ENSLACG00000001569	-	99	49.242	ENSSTOG00000013599	WRN	99	48.649	Ictidomys_tridecemlineatus
ENSLACG00000001569	-	90	50.037	ENSJJAG00000015655	Wrn	94	49.268	Jaculus_jaculus
ENSLACG00000001569	-	97	50.500	ENSLOCG00000010792	wrn	99	49.562	Lepisosteus_oculatus
ENSLACG00000001569	-	90	52.426	ENSLAFG00000004434	WRN	94	52.353	Loxodonta_africana
ENSLACG00000001569	-	90	50.836	ENSMFAG00000043428	WRN	97	50.000	Macaca_fascicularis
ENSLACG00000001569	-	90	50.615	ENSMMUG00000022655	WRN	97	49.788	Macaca_mulatta
ENSLACG00000001569	-	90	50.615	ENSMNEG00000032617	WRN	94	50.435	Macaca_nemestrina
ENSLACG00000001569	-	90	50.764	ENSMLEG00000038296	WRN	94	50.584	Mandrillus_leucophaeus
ENSLACG00000001569	-	98	48.665	ENSMGAG00000004960	WRN	97	48.531	Meleagris_gallopavo
ENSLACG00000001569	-	91	49.494	ENSMAUG00000016235	Wrn	95	49.243	Mesocricetus_auratus
ENSLACG00000001569	-	90	49.492	ENSMICG00000010630	WRN	94	49.057	Microcebus_murinus
ENSLACG00000001569	-	91	50.217	ENSMOCG00000013972	Wrn	96	49.394	Microtus_ochrogaster
ENSLACG00000001569	-	93	49.892	ENSMODG00000018997	WRN	97	49.142	Monodelphis_domestica
ENSLACG00000001569	-	92	48.903	MGP_CAROLIEiJ_G0030961	Wrn	98	48.408	Mus_caroli
ENSLACG00000001569	-	93	49.110	ENSMUSG00000031583	Wrn	97	48.895	Mus_musculus
ENSLACG00000001569	-	93	48.961	MGP_PahariEiJ_G0021430	Wrn	96	48.854	Mus_pahari
ENSLACG00000001569	-	92	48.837	MGP_SPRETEiJ_G0032079	Wrn	98	48.344	Mus_spretus
ENSLACG00000001569	-	92	50.777	ENSMPUG00000010201	WRN	97	50.706	Mustela_putorius_furo
ENSLACG00000001569	-	92	51.862	ENSMLUG00000005863	WRN	98	51.722	Myotis_lucifugus
ENSLACG00000001569	-	91	50.036	ENSNGAG00000018413	Wrn	97	49.150	Nannospalax_galili
ENSLACG00000001569	-	90	50.878	ENSNLEG00000012006	WRN	94	50.547	Nomascus_leucogenys
ENSLACG00000001569	-	59	54.032	ENSMEUG00000008271	-	64	54.032	Notamacropus_eugenii
ENSLACG00000001569	-	66	58.065	ENSOPRG00000001480	WRN	75	49.209	Ochotona_princeps
ENSLACG00000001569	-	90	49.745	ENSODEG00000004076	WRN	97	48.694	Octodon_degus
ENSLACG00000001569	-	91	51.524	ENSOANG00000005952	-	98	50.544	Ornithorhynchus_anatinus
ENSLACG00000001569	-	95	48.824	ENSOCUG00000012620	WRN	90	48.752	Oryctolagus_cuniculus
ENSLACG00000001569	-	90	50.437	ENSOGAG00000009600	WRN	97	50.291	Otolemur_garnettii
ENSLACG00000001569	-	93	50.711	ENSOARG00000000163	WRN	96	50.534	Ovis_aries
ENSLACG00000001569	-	91	51.166	ENSPPAG00000036871	WRN	94	50.948	Pan_paniscus
ENSLACG00000001569	-	93	49.822	ENSPPRG00000010928	WRN	97	49.360	Panthera_pardus
ENSLACG00000001569	-	93	49.680	ENSPTIG00000020609	WRN	97	49.110	Panthera_tigris_altaica
ENSLACG00000001569	-	91	51.239	ENSPTRG00000020145	WRN	94	51.020	Pan_troglodytes
ENSLACG00000001569	-	90	50.542	ENSPANG00000018594	WRN	97	49.788	Papio_anubis
ENSLACG00000001569	-	78	54.902	ENSPKIG00000025497	wrn	96	54.902	Paramormyrops_kingsleyae
ENSLACG00000001569	-	99	52.910	ENSPSIG00000013411	WRN	99	52.319	Pelodiscus_sinensis
ENSLACG00000001569	-	95	47.189	ENSPEMG00000020615	Wrn	99	48.990	Peromyscus_maniculatus_bairdii
ENSLACG00000001569	-	90	50.073	ENSPCIG00000020146	WRN	95	49.854	Phascolarctos_cinereus
ENSLACG00000001569	-	90	50.471	ENSPPYG00000018494	WRN	94	50.254	Pongo_abelii
ENSLACG00000001569	-	88	60.684	ENSPCAG00000013763	WRN	87	60.684	Procavia_capensis
ENSLACG00000001569	-	66	49.711	ENSPCOG00000012938	WRN	96	49.711	Propithecus_coquereli
ENSLACG00000001569	-	76	78.261	ENSPVAG00000012909	WRN	78	78.261	Pteropus_vampyrus
ENSLACG00000001569	-	98	47.273	ENSPNAG00000021848	wrn	99	46.914	Pygocentrus_nattereri
ENSLACG00000001569	-	93	49.001	ENSRNOG00000015440	Wrn	96	48.502	Rattus_norvegicus
ENSLACG00000001569	-	91	49.964	ENSRBIG00000031825	WRN	97	49.800	Rhinopithecus_bieti
ENSLACG00000001569	-	90	50.434	ENSRROG00000045381	WRN	94	50.254	Rhinopithecus_roxellana
ENSLACG00000001569	-	90	50.252	ENSSBOG00000027238	WRN	94	50.036	Saimiri_boliviensis_boliviensis
ENSLACG00000001569	-	90	50.799	ENSSHAG00000005577	WRN	95	50.729	Sarcophilus_harrisii
ENSLACG00000001569	-	97	46.501	ENSSFOG00015006123	wrn	97	47.980	Scleropages_formosus
ENSLACG00000001569	-	98	50.235	ENSSSCG00000015840	WRN	98	51.632	Sus_scrofa
ENSLACG00000001569	-	69	53.125	ENSTGUG00000001765	WRN	100	53.125	Taeniopygia_guttata
ENSLACG00000001569	-	57	50.459	ENSTBEG00000012702	-	69	45.600	Tupaia_belangeri
ENSLACG00000001569	-	80	57.645	ENSTTRG00000012302	WRN	89	53.098	Tursiops_truncatus
ENSLACG00000001569	-	91	49.635	ENSUAMG00000021324	WRN	94	49.596	Ursus_americanus
ENSLACG00000001569	-	84	49.021	ENSUMAG00000007159	WRN	99	48.978	Ursus_maritimus
ENSLACG00000001569	-	82	62.996	ENSVPAG00000011004	WRN	84	62.635	Vicugna_pacos
ENSLACG00000001569	-	99	48.876	ENSVVUG00000019867	WRN	99	48.810	Vulpes_vulpes
ENSLACG00000001569	-	90	54.586	ENSXETG00000018302	wrn	99	53.726	Xenopus_tropicalis