EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000001779 (Gene tree)
Gene ID: 102346706
Gene Symbol: -
Alias: -
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 42687 bases
Position: chrJH131202.1:29917-72603
Accession: 102346706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000001989	Nucleoplasmin	PF03066.15	7.9e-37	1	1
ENSLACP00000001990	Nucleoplasmin	PF03066.15	1.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002004	-	855	-	ENSLACP00000001990	285 (aa)	-	H2ZX69
ENSLACT00000002003	-	1060	XM_006013691	ENSLACP00000001989	327 (aa)	XP_006013753	H2ZX68

Gene Model

Click here to download ENSLACG00000001779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001779	-	100	42.230	ENSAPOG00000004268	npm1b	94	40.385	Acanthochromis_polyacanthus
ENSLACG00000001779	-	100	41.892	ENSAOCG00000012549	npm1b	93	40.129	Amphiprion_ocellaris
ENSLACG00000001779	-	100	41.216	ENSAPEG00000000868	npm1b	94	39.423	Amphiprion_percula
ENSLACG00000001779	-	100	39.661	ENSATEG00000006254	npm1b	94	41.234	Anabas_testudineus
ENSLACG00000001779	-	99	43.158	ENSACAG00000015626	-	93	45.638	Anolis_carolinensis
ENSLACG00000001779	-	100	43.793	ENSAMXG00000042148	npm1b	92	42.667	Astyanax_mexicanus
ENSLACG00000001779	-	90	33.074	ENSCAFG00000023359	-	95	31.868	Canis_familiaris
ENSLACG00000001779	-	99	43.617	ENSCPBG00000021221	-	54	43.972	Chrysemys_picta_bellii
ENSLACG00000001779	-	99	40.203	ENSCSEG00000004530	npm1b	93	39.731	Cynoglossus_semilaevis
ENSLACG00000001779	-	100	42.215	ENSCVAG00000013016	npm1b	92	41.356	Cyprinodon_variegatus
ENSLACG00000001779	-	100	50.173	ENSDARG00000037675	npm1b	90	49.650	Danio_rerio
ENSLACG00000001779	-	100	41.275	ENSELUG00000022123	npm1b	92	39.228	Esox_lucius
ENSLACG00000001779	-	99	41.696	ENSFALG00000003320	-	89	42.254	Ficedula_albicollis
ENSLACG00000001779	-	100	41.156	ENSFHEG00000020794	npm1b	94	40.323	Fundulus_heteroclitus
ENSLACG00000001779	-	100	45.614	ENSGMOG00000002689	npm1b	95	44.554	Gadus_morhua
ENSLACG00000001779	-	99	42.403	ENSGALG00000002197	-	65	42.403	Gallus_gallus
ENSLACG00000001779	-	100	39.116	ENSGAFG00000017709	npm1b	92	41.356	Gambusia_affinis
ENSLACG00000001779	-	100	41.176	ENSGACG00000016706	npm1b	95	41.722	Gasterosteus_aculeatus
ENSLACG00000001779	-	99	43.262	ENSGAGG00000020250	-	90	44.326	Gopherus_agassizii
ENSLACG00000001779	-	100	37.543	ENSHBUG00000019903	npm1b	87	39.474	Haplochromis_burtoni
ENSLACG00000001779	-	100	43.509	ENSHCOG00000003895	npm1b	93	41.892	Hippocampus_comes
ENSLACG00000001779	-	100	44.710	ENSIPUG00000020165	npm1b	92	45.302	Ictalurus_punctatus
ENSLACG00000001779	-	100	37.500	ENSKMAG00000008260	npm1b	95	38.291	Kryptolebias_marmoratus
ENSLACG00000001779	-	99	38.356	ENSLOCG00000001942	npm1b	96	37.209	Lepisosteus_oculatus
ENSLACG00000001779	-	76	39.574	ENSMAMG00000015335	npm1b	93	41.629	Mastacembelus_armatus
ENSLACG00000001779	-	99	43.110	ENSMGAG00000001591	-	96	43.662	Meleagris_gallopavo
ENSLACG00000001779	-	86	41.057	ENSMALG00000015383	npm1b	94	41.700	Monopterus_albus
ENSLACG00000001779	-	100	39.661	ENSONIG00000001397	npm1b	93	41.391	Oreochromis_niloticus
ENSLACG00000001779	-	100	39.931	ENSOMEG00000003414	npm1b	94	40.273	Oryzias_melastigma
ENSLACG00000001779	-	99	47.719	ENSPKIG00000020050	npm1b	91	45.608	Paramormyrops_kingsleyae
ENSLACG00000001779	-	99	45.070	ENSPSIG00000011204	-	86	46.831	Pelodiscus_sinensis
ENSLACG00000001779	-	100	44.097	ENSPFOG00000018357	npm1b	90	44.097	Poecilia_formosa
ENSLACG00000001779	-	100	45.890	ENSPNAG00000005498	npm1b	93	44.333	Pygocentrus_nattereri
ENSLACG00000001779	-	99	44.326	ENSSFOG00015005064	npm1b	92	44.178	Scleropages_formosus
ENSLACG00000001779	-	100	40.138	ENSSMAG00000008088	npm1b	92	43.667	Scophthalmus_maximus
ENSLACG00000001779	-	100	41.156	ENSSDUG00000007726	npm1b	94	42.140	Seriola_dumerili
ENSLACG00000001779	-	100	40.816	ENSSLDG00000021396	npm1b	94	41.806	Seriola_lalandi_dorsalis
ENSLACG00000001779	-	100	38.983	ENSSPAG00000011152	npm1b	94	39.744	Stegastes_partitus
ENSLACG00000001779	-	99	42.160	ENSTGUG00000014970	-	96	42.160	Taeniopygia_guttata
ENSLACG00000001779	-	100	42.857	ENSTRUG00000008105	npm1b	89	42.333	Takifugu_rubripes
ENSLACG00000001779	-	100	41.404	ENSTNIG00000013057	npm1b	94	40.594	Tetraodon_nigroviridis
ENSLACG00000001779	-	100	45.296	ENSXETG00000008403	npm1	92	43.333	Xenopus_tropicalis
ENSLACG00000001779	-	100	43.554	ENSXMAG00000001986	npm1b	92	43.581	Xiphophorus_maculatus