EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000001833 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 3432 bases
Position: chrJH130909.1:31761-35192
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002051	RVT_1	PF00078.27	8.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002065	-	3129	-	ENSLACP00000002051	1043 (aa)	-	H2ZXD0

Gene Model

Click here to download ENSLACG00000001833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000001833	-	91	74.618	ENSLACG00000002417	-	98	74.618
ENSLACG00000001833	-	89	75.913	ENSLACG00000004818	-	100	75.913
ENSLACG00000001833	-	52	30.952	ENSLACG00000018782	-	73	30.952
ENSLACG00000001833	-	95	73.339	ENSLACG00000004854	-	97	73.339

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001833	-	56	30.435	ENSAPEG00000014949	-	96	30.376	Amphiprion_percula
ENSLACG00000001833	-	56	30.469	ENSATEG00000018698	-	56	30.469	Anabas_testudineus
ENSLACG00000001833	-	63	30.961	ENSACLG00000019658	-	54	30.961	Astatotilapia_calliptera
ENSLACG00000001833	-	63	30.961	ENSACLG00000002182	-	54	30.961	Astatotilapia_calliptera
ENSLACG00000001833	-	51	30.603	ENSAMXG00000030022	-	50	30.603	Astyanax_mexicanus
ENSLACG00000001833	-	52	31.765	ENSCVAG00000020907	-	82	31.765	Cyprinodon_variegatus
ENSLACG00000001833	-	99	39.142	ENSORLG00000023375	-	85	39.142	Oryzias_latipes
ENSLACG00000001833	-	50	30.944	ENSORLG00000027443	-	96	30.944	Oryzias_latipes
ENSLACG00000001833	-	99	43.986	ENSORLG00000028233	-	85	44.162	Oryzias_latipes
ENSLACG00000001833	-	99	43.810	ENSORLG00000026053	-	85	43.986	Oryzias_latipes
ENSLACG00000001833	-	53	31.304	ENSORLG00000025397	-	61	31.304	Oryzias_latipes
ENSLACG00000001833	-	74	30.272	ENSORLG00000026235	-	92	30.272	Oryzias_latipes
ENSLACG00000001833	-	65	32.513	ENSORLG00000028879	-	82	32.513	Oryzias_latipes
ENSLACG00000001833	-	92	40.789	ENSORLG00020021465	-	85	40.789	Oryzias_latipes_hni
ENSLACG00000001833	-	99	39.035	ENSORLG00020012971	-	92	39.035	Oryzias_latipes_hni
ENSLACG00000001833	-	57	30.194	ENSORLG00020000868	-	52	30.194	Oryzias_latipes_hni
ENSLACG00000001833	-	57	31.259	ENSORLG00020000592	-	80	31.259	Oryzias_latipes_hni
ENSLACG00000001833	-	99	39.035	ENSORLG00020014981	-	85	39.035	Oryzias_latipes_hni
ENSLACG00000001833	-	52	32.217	ENSORLG00020002002	-	97	32.217	Oryzias_latipes_hni
ENSLACG00000001833	-	73	41.637	ENSORLG00020009401	-	84	41.871	Oryzias_latipes_hni
ENSLACG00000001833	-	58	31.541	ENSORLG00020009084	-	93	31.541	Oryzias_latipes_hni
ENSLACG00000001833	-	68	31.203	ENSORLG00020019030	-	94	31.203	Oryzias_latipes_hni
ENSLACG00000001833	-	76	30.881	ENSORLG00015003846	-	91	30.881	Oryzias_latipes_hsok
ENSLACG00000001833	-	54	30.469	ENSORLG00015000130	-	54	30.469	Oryzias_latipes_hsok
ENSLACG00000001833	-	53	31.672	ENSORLG00015010510	-	99	31.672	Oryzias_latipes_hsok
ENSLACG00000001833	-	59	32.468	ENSOMEG00000001995	-	60	32.468	Oryzias_melastigma
ENSLACG00000001833	-	52	31.926	ENSOMEG00000013437	-	98	31.926	Oryzias_melastigma
ENSLACG00000001833	-	72	31.176	ENSPKIG00000006845	-	85	31.629	Paramormyrops_kingsleyae
ENSLACG00000001833	-	55	31.250	ENSPKIG00000020363	-	50	31.250	Paramormyrops_kingsleyae
ENSLACG00000001833	-	99	31.004	ENSPKIG00000016590	-	84	31.004	Paramormyrops_kingsleyae
ENSLACG00000001833	-	51	30.636	ENSPKIG00000013293	-	52	30.636	Paramormyrops_kingsleyae
ENSLACG00000001833	-	55	30.488	ENSPMEG00000023031	-	58	30.488	Poecilia_mexicana
ENSLACG00000001833	-	58	30.048	ENSPREG00000006052	-	61	30.048	Poecilia_reticulata
ENSLACG00000001833	-	56	30.739	ENSXMAG00000022159	-	53	30.739	Xiphophorus_maculatus
ENSLACG00000001833	-	51	40.217	ENSXMAG00000023370	-	50	40.217	Xiphophorus_maculatus